Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 299 NP_001073289 17 3301 NP_001120933 17 3301 NP_899632 17 3301 NP_001120934 17 3301 NP_004886 17 3301 NP_001230062 17 3301 XP_005273095 17 3301 XP_005273094 17 3301 XP_006711796 17 3301 XP_005273093 17 3301 NP_570711 17 4312 NP_570712 17 4312 NP_570714 17 4312 NP_570713 17 4312 NP_570716 17 4312 NP_000235 17 4312 NP_570715 17 4312 NP_004332 17 4312 NP_071941 17 4312 XP_006718620 17 4312 XP_005274059 17 4312 XP_005274060 17 4312 XP_005274058 17 4312 XP_005264615 17 4312 XP_006712164 17 4312 XP_005264614 17 4312 XP_005264613 17 4312 XP_005264612 17 4312 NP_001207417 16 5631 XP_006721183 16 5631 NP_001248 16 5631 NP_001207419 16 5631 NP_001207418 16 5631 NP_006222 16 7355 NP_003092 15 9605 NP_001239441 15 9605 NP_002079 15 9605 NP_001239440 15 9605 NP_077015 15 9605 XP_006723233 15 9605 XP_006723232 15 9605 XP_005258879 15 9605 XP_005258878 15 9605 NP_001244899 15 9605>NP_004295 Length = 1620 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 TSTIM DYN Sbjct: 1085 TSTIMTDYN 1093>NP_001073289 Length = 1036 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STIMIDYN 9 +T+MID+N Sbjct: 55 ATLMIDFN 62>NP_001120933 Length = 979 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STIMIDYN 9 +T+MID+N Sbjct: 55 ATLMIDFN 62>NP_899632 Length = 922 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STIMIDYN 9 +T+MID+N Sbjct: 55 ATLMIDFN 62>NP_001120934 Length = 979 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STIMIDYN 9 +T+MID+N Sbjct: 55 ATLMIDFN 62>NP_004886 Length = 1036 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STIMIDYN 9 +T+MID+N Sbjct: 55 ATLMIDFN 62>NP_001230062 Length = 1034 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STIMIDYN 9 +T+MID+N Sbjct: 53 ATLMIDFN 60>XP_005273095 Length = 979 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STIMIDYN 9 +T+MID+N Sbjct: 55 ATLMIDFN 62>XP_005273094 Length = 1036 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STIMIDYN 9 +T+MID+N Sbjct: 55 ATLMIDFN 62>XP_006711796 Length = 1036 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STIMIDYN 9 +T+MID+N Sbjct: 55 ATLMIDFN 62>XP_005273093 Length = 1036 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STIMIDYN 9 +T+MID+N Sbjct: 55 ATLMIDFN 62>NP_570711 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 344 TATVIQDYN 352>NP_570712 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 349 TATVIQDYN 357>NP_570714 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 349 TATVIQDYN 357>NP_570713 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 349 TATVIQDYN 357>NP_570716 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 349 TATVIQDYN 357>NP_000235 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 349 TATVIQDYN 357>NP_570715 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 349 TATVIQDYN 357>NP_004332 Length = 2225 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIMIDYN 9 TIM++YN Sbjct: 969 TIMVNYN 975>NP_071941 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 STIMIDY 8 +T+MIDY Sbjct: 230 NTVMIDY 236>XP_006718620 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 344 TATVIQDYN 352>XP_005274059 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 344 TATVIQDYN 352>XP_005274060 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 344 TATVIQDYN 352>XP_005274058 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTIMIDYN 9 T+T++ DYN Sbjct: 344 TATVIQDYN 352>XP_005264615 Length = 2162 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIMIDYN 9 TIM++YN Sbjct: 906 TIMVNYN 912>XP_006712164 Length = 2179 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIMIDYN 9 TIM++YN Sbjct: 906 TIMVNYN 912>XP_005264614 Length = 2191 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIMIDYN 9 TIM++YN Sbjct: 969 TIMVNYN 975>XP_005264613 Length = 2208 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIMIDYN 9 TIM++YN Sbjct: 969 TIMVNYN 975>XP_005264612 Length = 2242 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIMIDYN 9 TIM++YN Sbjct: 969 TIMVNYN 975>NP_001207417 Length = 760 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TSTIMID 7 T+TIMID Sbjct: 395 TATIMID 401>XP_006721183 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TSTIMID 7 T+TIMID Sbjct: 348 TATIMID 354>NP_001248 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TSTIMID 7 T+TIMID Sbjct: 348 TATIMID 354>NP_001207419 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TSTIMID 7 T+TIMID Sbjct: 94 TATIMID 100>NP_001207418 Length = 674 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TSTIMID 7 T+TIMID Sbjct: 309 TATIMID 315>NP_006222 Length = 2286 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TIMIDYN 9 TIM+ YN Sbjct: 357 TIMVTYN 363>NP_003092 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 STIMIDY 8 ST+++DY Sbjct: 155 STLVVDY 161>NP_001239441 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 STIMIDY 8 ST+++DY Sbjct: 90 STLVVDY 96>NP_002079 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STIMIDYN 9 STI+ID N Sbjct: 212 STIIIDAN 219>NP_001239440 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 STIMIDY 8 ST+++DY Sbjct: 97 STLVVDY 103>NP_077015 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 TSTIMIDY 8 T +M+DY Sbjct: 613 TQIVMVDY 620>XP_006723233 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STIMIDYN 9 STI+ID N Sbjct: 144 STIIIDAN 151>XP_006723232 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STIMIDYN 9 STI+ID N Sbjct: 212 STIIIDAN 219>XP_005258879 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STIMIDYN 9 STI+ID N Sbjct: 212 STIIIDAN 219>XP_005258878 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STIMIDYN 9 STI+ID N Sbjct: 212 STIIIDAN 219>NP_001244899 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 TSTIMIDY 8 T +M+DY Sbjct: 613 TQIVMVDY 620Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.128 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 368,639 Number of extensions: 554 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |