Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 19 665 NP_001243397 19 665 XP_005269721 19 665 NP_056078 17 2528 NP_689845 17 2528 NP_001167587 17 2528 NP_001167588 17 2528 XP_005254315 17 2528 XP_005254314 17 2528 XP_006720509 17 2528 XP_005254313 17 2528 XP_005254312 17 2528 NP_057191 17 4312 XP_006714540 17 4312 NP_078966 16 7355 NP_116561 16 7355 NP_001276537 16 7355 NP_001186072 16 7355 NP_001156425 16 7355 NP_001156423 16 7355 XP_005274123 16 7355 XP_005274120 16 7355 XP_005274119 16 7355 XP_005274118 16 7355 XP_005274117 16 7355 XP_006718652 16 7355 XP_005274115 16 7355 XP_005274114 16 7355 NP_001035194 16 7355 NP_073577 15 9605 NP_001106710 15 9605 NP_006353 15 9605 NP_005952 15 9605 XP_006718483 15 9605 XP_006718482 15 9605 XP_006718481 15 9605 XP_006715999 15 9605 XP_006715998 15 9605 XP_006715997 15 9605>NP_036462 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSSTYISAS 9 T+STYISAS Sbjct: 415 TTSTYISAS 423>NP_001243397 Length = 1890 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSSTYISAS 9 T+STYISAS Sbjct: 415 TTSTYISAS 423>XP_005269721 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSSTYISAS 9 T+STYISAS Sbjct: 415 TTSTYISAS 423>NP_056078 Length = 3036 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TSSTYIS 7 TSSTYIS Sbjct: 1764 TSSTYIS 1770>NP_689845 Length = 976 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TSSTYIS 7 TSSTYIS Sbjct: 805 TSSTYIS 811>NP_001167587 Length = 3037 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TSSTYIS 7 TSSTYIS Sbjct: 1764 TSSTYIS 1770>NP_001167588 Length = 2400 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TSSTYIS 7 TSSTYIS Sbjct: 1128 TSSTYIS 1134>XP_005254315 Length = 2576 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TSSTYIS 7 TSSTYIS Sbjct: 1764 TSSTYIS 1770>XP_005254314 Length = 2605 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TSSTYIS 7 TSSTYIS Sbjct: 1764 TSSTYIS 1770>XP_006720509 Length = 2646 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TSSTYIS 7 TSSTYIS Sbjct: 1764 TSSTYIS 1770>XP_005254313 Length = 3057 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TSSTYIS 7 TSSTYIS Sbjct: 1764 TSSTYIS 1770>XP_005254312 Length = 3058 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TSSTYIS 7 TSSTYIS Sbjct: 1764 TSSTYIS 1770>NP_057191 Length = 1074 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSSTYISAS 9 TSST +SAS Sbjct: 432 TSSTAVSAS 440>XP_006714540 Length = 1030 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSSTYISAS 9 TSST +SAS Sbjct: 388 TSSTAVSAS 396>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y SAS Sbjct: 2026 TSSPYSSAS 2034>NP_116561 Length = 910 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 396 TSSPYVSKS 404>NP_001276537 Length = 902 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 348 TSSPYVSKS 356>NP_001186072 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSTYISAS 9 SSTYIS + Sbjct: 216 SSTYISTA 223>NP_001156425 Length = 935 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 397 TSSPYVSKS 405>NP_001156423 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 396 TSSPYVSKS 404>XP_005274123 Length = 894 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 396 TSSPYVSKS 404>XP_005274120 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 397 TSSPYVSKS 405>XP_005274119 Length = 924 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 370 TSSPYVSKS 378>XP_005274118 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 396 TSSPYVSKS 404>XP_005274117 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 397 TSSPYVSKS 405>XP_006718652 Length = 2196 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 370 TSSPYVSKS 378>XP_005274115 Length = 2222 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 396 TSSPYVSKS 404>XP_005274114 Length = 2223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSSTYISAS 9 TSS Y+S S Sbjct: 397 TSSPYVSKS 405>NP_001035194 Length = 4493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTYISAS 9 SSTY+++S Sbjct: 3584 SSTYVTSS 3591>NP_073577 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TYISAS 9 TYISAS Sbjct: 1171 TYISAS 1176>NP_001106710 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TYISAS 9 TYISAS Sbjct: 1144 TYISAS 1149>NP_006353 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STYISA 8 STYISA Sbjct: 335 STYISA 340>NP_005952 Length = 2439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSSTYISA 8 TSS+++SA Sbjct: 2161 TSSSFVSA 2168>XP_006718483 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STYISA 8 STYISA Sbjct: 335 STYISA 340>XP_006718482 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STYISA 8 STYISA Sbjct: 335 STYISA 340>XP_006718481 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STYISA 8 STYISA Sbjct: 335 STYISA 340>XP_006715999 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TYISAS 9 TYISAS Sbjct: 1143 TYISAS 1148>XP_006715998 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TYISAS 9 TYISAS Sbjct: 1164 TYISAS 1169>XP_006715997 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TYISAS 9 TYISAS Sbjct: 1170 TYISAS 1175Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.284 0.0911 0.201 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 316,994 Number of extensions: 298 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |