Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 390 XP_005262424 20 390 NP_001138537 18 1135 NP_997374 18 1135 NP_001265596 16 5631 NP_057361 16 5631 NP_899050 16 5631 NP_001265597 16 5631 NP_001265595 16 5631 XP_005252323 16 5631 XP_005252322 16 5631 XP_005252321 16 5631 XP_005252320 16 5631 NP_001092272 16 5631 NP_115547 16 5631 NP_006246 16 7355 NP_660337 16 7355 XP_006720926 16 7355 XP_006720925 16 7355 XP_006720924 16 7355 XP_006720923 16 7355 XP_005255218 16 7355 XP_005255217 16 7355 NP_008969 15 9605 NP_001157281 15 9605 NP_001157145 15 9605 NP_689561 15 9605 NP_001157283 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_001135797 15 9605 NP_001135796 15 9605 NP_003044 15 9605 NP_001129163 15 9605 XP_006713055 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_722576 Length = 3080 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSSNRVGVH 9 TSSN VGVH Sbjct: 1344 TSSNTVGVH 1352>XP_005262424 Length = 2875 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSSNRVGVH 9 TSSN VGVH Sbjct: 1139 TSSNTVGVH 1147>NP_001138537 Length = 900 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSSNRVGVH 9 +SSN VGVH Sbjct: 34 SSSNTVGVH 42>NP_997374 Length = 677 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSSNRVGVH 9 +SSN VGVH Sbjct: 34 SSSNTVGVH 42>NP_001265596 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSSNRVGV 8 +SSN++GV Sbjct: 186 SSSNKIGV 193>NP_057361 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSSNRVGV 8 +SSN++GV Sbjct: 186 SSSNKIGV 193>NP_899050 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSSNRVGV 8 +SSN++GV Sbjct: 186 SSSNKIGV 193>NP_001265597 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSSNRVGV 8 +SSN++GV Sbjct: 186 SSSNKIGV 193>NP_001265595 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSSNRVGV 8 +SSN++GV Sbjct: 186 SSSNKIGV 193>XP_005252323 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSN +GV Sbjct: 558 TSSNNLGV 565>XP_005252322 Length = 690 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSN +GV Sbjct: 629 TSSNNLGV 636>XP_005252321 Length = 696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSN +GV Sbjct: 619 TSSNNLGV 626>XP_005252320 Length = 706 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSN +GV Sbjct: 645 TSSNNLGV 652>NP_001092272 Length = 722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSN +GV Sbjct: 645 TSSNNLGV 652>NP_115547 Length = 706 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSN +GV Sbjct: 629 TSSNNLGV 636>NP_006246 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SSNRVGV 8 SSNR+G+ Sbjct: 346 SSNRLGI 352>NP_660337 Length = 1748 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSNRV V Sbjct: 904 TSSNRVVV 911>XP_006720926 Length = 1383 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSNRV V Sbjct: 905 TSSNRVVV 912>XP_006720925 Length = 1674 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSNRV V Sbjct: 905 TSSNRVVV 912>XP_006720924 Length = 1679 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSNRV V Sbjct: 833 TSSNRVVV 840>XP_006720923 Length = 1738 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSNRV V Sbjct: 905 TSSNRVVV 912>XP_005255218 Length = 1750 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSNRV V Sbjct: 904 TSSNRVVV 911>XP_005255217 Length = 1751 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 TSSNRV V Sbjct: 905 TSSNRVVV 912>NP_008969 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SNRVGVH 9 SN+VG H Sbjct: 867 SNKVGSH 873>NP_001157281 Length = 1941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 T SN++GV Sbjct: 1886 TVSNKIGV 1893>NP_001157145 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 T SN++GV Sbjct: 683 TVSNKIGV 690>NP_689561 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 T SN++GV Sbjct: 835 TVSNKIGV 842>NP_001157283 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSSNRVGV 8 T SN++GV Sbjct: 659 TVSNKIGV 666>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSSNRVG 7 T+SNR+G Sbjct: 8981 TASNRLG 8987>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSSNRVG 7 T+SNR+G Sbjct: 9106 TASNRLG 9112>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSSNRVG 7 T+SNR+G Sbjct: 16405 TASNRLG 16411>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSSNRVG 7 T+SNR+G Sbjct: 15478 TASNRLG 15484>NP_001135797 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 SNRVGVH 9 +NR+G H Sbjct: 161 TNRIGYH 167>NP_001135796 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 SNRVGVH 9 +NR+G H Sbjct: 161 TNRIGYH 167>NP_003044 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 SNRVGVH 9 +NR+G H Sbjct: 161 TNRIGYH 167>NP_001129163 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 SNRVGVH 9 +NR+G H Sbjct: 161 TNRIGYH 167>XP_006713055 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSSNRVGV 8 TSS R GV Sbjct: 123 TSSTRTGV 130>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSSNRVG 7 T+SNR+G Sbjct: 4718 TASNRLG 4724>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSSNRVG 7 T+SNR+G Sbjct: 6077 TASNRLG 6083>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSSNRVG 7 T+SNR+G Sbjct: 16033 TASNRLG 16039>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSSNRVG 7 T+SNR+G Sbjct: 17539 TASNRLG 17545>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSSNRVG 7 T+SNR+G Sbjct: 18046 TASNRLG 18052>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSSNRVG 7 T+SNR+G Sbjct: 9173 TASNRLG 9179Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.118 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,965 Number of extensions: 539 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |