Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 390 XP_005262424 20 390 NP_937762 17 2528 NP_001121189 17 2528 NP_055501 17 3301 XP_005259501 17 3301 NP_060224 17 4312 NP_055869 17 4312 NP_001006948 17 4312 XP_005268797 17 4312 XP_005268796 17 4312 XP_005268794 17 4312 XP_006715189 17 4312 XP_006715188 17 4312 NP_068370 16 5631 NP_001271457 16 5631 NP_001271456 16 5631 NP_060280 16 5631 NP_001271458 16 5631 XP_005255463 16 5631 XP_006720964 16 5631 XP_005255461 16 5631 XP_005255460 16 5631 XP_005255459 16 5631 NP_001230166 16 7355 XP_005251183 16 7355 NP_004654 15 9605 NP_001193765 15 9605 NP_065120 15 9605 NP_061748 15 9605 NP_001243657 15 9605 NP_001243656 15 9605 NP_001243655 15 9605 NP_001243654 15 9605 NP_060101 15 9605 NP_115270 15 9605 NP_006581 15 9605 XP_005259175 15 9605 XP_005259174 15 9605 XP_006723374 15 9605 XP_005259173 15 9605 XP_006723373 15 9605 XP_006723372 15 9605 XP_005259172 15 9605 XP_005259171 15 9605 XP_006723371 15 9605 XP_006711986 15 9605 XP_006711985 15 9605 NP_067008 15 9605 NP_004209 15 9605 NP_115269 15 9605 NP_003727 15 9605>NP_722576 Length = 3080 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TSRFTKNS 8 TSRFTKNS Sbjct: 376 TSRFTKNS 383>XP_005262424 Length = 2875 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TSRFTKNS 8 TSRFTKNS Sbjct: 171 TSRFTKNS 178>NP_937762 Length = 3333 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SRFTKNSA 9 SRF KNSA Sbjct: 1245 SRFCKNSA 1252>NP_001121189 Length = 3277 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SRFTKNSA 9 SRF KNSA Sbjct: 1245 SRFCKNSA 1252>NP_055501 Length = 1070 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 TSRFTK ++ Sbjct: 540 TSRFTKKAS 548>XP_005259501 Length = 1070 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 TSRFTK ++ Sbjct: 540 TSRFTKKAS 548>NP_060224 Length = 1440 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFTKN Sbjct: 14 SRFTKN 19>NP_055869 Length = 1464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFTKN Sbjct: 14 SRFTKN 19>NP_001006948 Length = 522 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFTKN Sbjct: 14 SRFTKN 19>XP_005268797 Length = 1384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFTKN Sbjct: 14 SRFTKN 19>XP_005268796 Length = 1403 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFTKN Sbjct: 14 SRFTKN 19>XP_005268794 Length = 1443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFTKN Sbjct: 14 SRFTKN 19>XP_006715189 Length = 1240 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFTKN Sbjct: 14 SRFTKN 19>XP_006715188 Length = 1400 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFTKN Sbjct: 14 SRFTKN 19>NP_068370 Length = 614 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSRFTK 6 TSRFTK Sbjct: 582 TSRFTK 587>NP_001271457 Length = 408 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FTKNSA 9 FTKNSA Sbjct: 381 FTKNSA 386>NP_001271456 Length = 697 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FTKNSA 9 FTKNSA Sbjct: 670 FTKNSA 675>NP_060280 Length = 485 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FTKNSA 9 FTKNSA Sbjct: 458 FTKNSA 463>NP_001271458 Length = 408 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FTKNSA 9 FTKNSA Sbjct: 381 FTKNSA 386>XP_005255463 Length = 485 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FTKNSA 9 FTKNSA Sbjct: 458 FTKNSA 463>XP_006720964 Length = 485 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FTKNSA 9 FTKNSA Sbjct: 458 FTKNSA 463>XP_005255461 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FTKNSA 9 FTKNSA Sbjct: 460 FTKNSA 465>XP_005255460 Length = 610 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FTKNSA 9 FTKNSA Sbjct: 583 FTKNSA 588>XP_005255459 Length = 624 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FTKNSA 9 FTKNSA Sbjct: 597 FTKNSA 602>NP_001230166 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSRFTKNS 8 TS+FT++S Sbjct: 12 TSKFTRSS 19>XP_005251183 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSRFTKNS 8 TS+FT++S Sbjct: 12 TSKFTRSS 19>NP_004654 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFT+N Sbjct: 29 SRFTRN 34>NP_001193765 Length = 155 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFT+N Sbjct: 29 SRFTRN 34>NP_065120 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFT+N Sbjct: 30 SRFTRN 35>NP_061748 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSRFTKNS 8 T +FT+NS Sbjct: 130 TPKFTQNS 137>NP_001243657 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RFTKNS 8 RFTKN+ Sbjct: 353 RFTKNN 358>NP_001243656 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RFTKNS 8 RFTKN+ Sbjct: 378 RFTKNN 383>NP_001243655 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RFTKNS 8 RFTKN+ Sbjct: 456 RFTKNN 461>NP_001243654 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RFTKNS 8 RFTKN+ Sbjct: 456 RFTKNN 461>NP_060101 Length = 1712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 +RFTKN Sbjct: 830 NRFTKN 835>NP_115270 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSRFTKNS 8 T +FT+NS Sbjct: 130 TPKFTQNS 137>NP_006581 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RFTKNS 8 RFTKN+ Sbjct: 456 RFTKNN 461>XP_005259175 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 T+R TK+SA Sbjct: 423 TTRTTKDSA 431>XP_005259174 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 T+R TK+SA Sbjct: 627 TTRTTKDSA 635>XP_006723374 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 T+R TK+SA Sbjct: 987 TTRTTKDSA 995>XP_005259173 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 T+R TK+SA Sbjct: 927 TTRTTKDSA 935>XP_006723373 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 T+R TK+SA Sbjct: 948 TTRTTKDSA 956>XP_006723372 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 T+R TK+SA Sbjct: 987 TTRTTKDSA 995>XP_005259172 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 T+R TK+SA Sbjct: 987 TTRTTKDSA 995>XP_005259171 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 T+R TK+SA Sbjct: 987 TTRTTKDSA 995>XP_006723371 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 T+R TK+SA Sbjct: 987 TTRTTKDSA 995>XP_006711986 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RFTKNS 8 RFTKN+ Sbjct: 187 RFTKNN 192>XP_006711985 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RFTKNS 8 RFTKN+ Sbjct: 187 RFTKNN 192>NP_067008 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSRFTKNSA 9 T+R TK+SA Sbjct: 987 TTRTTKDSA 995>NP_004209 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRFTKN 7 SRFT+N Sbjct: 29 SRFTRN 34>NP_115269 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSRFTKNS 8 T +FT+NS Sbjct: 130 TPKFTQNS 137>NP_003727 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSRFTKNS 8 T +FT+NS Sbjct: 130 TPKFTQNS 137Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.105 0.262 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 403,442 Number of extensions: 437 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |