Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_758519 17 2528 NP_000751 17 2528 NP_724781 17 2528 NP_001094811 17 2528 XP_005270552 17 2528 XP_005270550 17 2528 XP_005270549 17 2528 NP_789743 17 3301 NP_001005469 17 3301 NP_631958 17 4312 NP_631957 17 4312 NP_115884 17 4312 NP_001138932 17 4312 NP_001138931 17 4312 XP_006714116 17 4312 XP_006714115 17 4312 XP_005265840 17 4312 XP_006714114 17 4312 NP_001130010 16 5631 NP_061141 16 5631 XP_006726577 16 5631 XP_005255020 16 5631 XP_006709997 16 5631 NP_001001923 16 5631 NP_079523 16 5631 NP_001034764 16 5631 NP_004940 16 7355 NP_077740 16 7355 XP_005258263 16 7355 XP_006720777 16 7355 NP_001005278 16 7355 NP_001004457 16 7355 NP_001009899 15 9605 NP_055873 15 9605 NP_001009814 15 9605 NP_004807 15 9605 NP_001121080 15 9605 NP_055737 15 9605 NP_001028225 15 9605 NP_127497 15 9605 NP_542170 15 9605 NP_127500 15 9605 NP_127499 15 9605 NP_054730 15 9605 XP_005260667 15 9605 XP_005260668 15 9605 XP_006719855 15 9605 XP_006719853 15 9605 XP_005252366 15 9605 XP_005252365 15 9605 XP_005252364 15 9605 XP_005247723 15 9605 XP_005247266 15 9605 XP_005247265 15 9605 NP_002539 15 9605 NP_001005284 15 9605 NP_659198 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSMSTTLCL 9 TSMSTT CL Sbjct: 410 TSMSTTPCL 418>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSMSTTLCL 9 TSMSTT CL Sbjct: 205 TSMSTTPCL 213>NP_758519 Length = 783 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 TSMS LCL Sbjct: 211 TSMSPQLCL 219>NP_000751 Length = 836 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 TSMS LCL Sbjct: 211 TSMSPQLCL 219>NP_724781 Length = 863 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 TSMS LCL Sbjct: 211 TSMSPQLCL 219>NP_001094811 Length = 94 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SMSTTLCL 9 S STTLCL Sbjct: 39 SESTTLCL 46>XP_005270552 Length = 731 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 TSMS LCL Sbjct: 79 TSMSPQLCL 87>XP_005270550 Length = 835 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 TSMS LCL Sbjct: 211 TSMSPQLCL 219>XP_005270549 Length = 841 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 TSMS LCL Sbjct: 189 TSMSPQLCL 197>NP_789743 Length = 342 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMSTTLCL 9 S+STT CL Sbjct: 165 SLSTTACL 172>NP_001005469 Length = 314 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSMSTTLC 8 T+M+TT+C Sbjct: 132 TTMTTTVC 139>NP_631958 Length = 73 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTLCL 9 STTLCL Sbjct: 30 STTLCL 35>NP_631957 Length = 73 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTLCL 9 STTLCL Sbjct: 30 STTLCL 35>NP_115884 Length = 91 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTLCL 9 STTLCL Sbjct: 48 STTLCL 53>NP_001138932 Length = 112 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTLCL 9 STTLCL Sbjct: 48 STTLCL 53>NP_001138931 Length = 73 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTLCL 9 STTLCL Sbjct: 30 STTLCL 35>XP_006714116 Length = 108 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTLCL 9 STTLCL Sbjct: 45 STTLCL 50>XP_006714115 Length = 111 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTLCL 9 STTLCL Sbjct: 48 STTLCL 53>XP_005265840 Length = 111 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTLCL 9 STTLCL Sbjct: 68 STTLCL 73>XP_006714114 Length = 131 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTLCL 9 STTLCL Sbjct: 68 STTLCL 73>NP_001130010 Length = 1090 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSMSTTLC 8 T+M+T LC Sbjct: 420 TAMNTVLC 427>NP_061141 Length = 944 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSMSTTLC 8 TSM TLC Sbjct: 846 TSMRPTLC 853>XP_006726577 Length = 201 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SMSTTLCL 9 +++TTLCL Sbjct: 182 AVTTTLCL 189>XP_005255020 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSMSTTLC 8 TSM TLC Sbjct: 701 TSMRPTLC 708>XP_006709997 Length = 201 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SMSTTLCL 9 +++TTLCL Sbjct: 182 AVTTTLCL 189>NP_001001923 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 T+MS LCL Sbjct: 138 TAMSQRLCL 146>NP_079523 Length = 1059 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSMSTTLC 8 T+M+T LC Sbjct: 389 TAMNTVLC 396>NP_001034764 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSMSTTLC 8 TSM TLC Sbjct: 831 TSMRPTLC 838>NP_004940 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TSMSTTLC 8 TS+ TLC Sbjct: 662 TSLDVTLC 669>NP_077740 Length = 901 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TSMSTTLC 8 TS+ TLC Sbjct: 662 TSLDVTLC 669>XP_005258263 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TSMSTTLC 8 TS+ TLC Sbjct: 519 TSLDVTLC 526>XP_006720777 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MSTTLC 8 M+TTLC Sbjct: 1 MNTTLC 6>NP_001005278 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MSTTLC 8 M+TTLC Sbjct: 136 MTTTLC 141>NP_001004457 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSMSTTLC 8 TSMS LC Sbjct: 151 TSMSPQLC 158>NP_001009899 Length = 2245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 +SM+T CL Sbjct: 779 SSMNTVACL 787>NP_055873 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMSTTLC 8 S +TTLC Sbjct: 295 SFATTLC 301>NP_001009814 Length = 1039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMSTTLC 8 S +TTLC Sbjct: 295 SFATTLC 301>NP_004807 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SMSTTLCL 9 +++TT+CL Sbjct: 95 ALTTTVCL 102>NP_001121080 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SMSTTLCL 9 +++TT+CL Sbjct: 95 ALTTTVCL 102>NP_055737 Length = 1429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTLCL 9 +TTLCL Sbjct: 547 TTTLCL 552>NP_001028225 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTLCL 9 +TTLCL Sbjct: 547 TTTLCL 552>NP_127497 Length = 1473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTLCL 9 +TTLCL Sbjct: 547 TTTLCL 552>NP_542170 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TSMSTTLC 8 TS+ +T+C Sbjct: 196 TSLQSTMC 203>NP_127500 Length = 1399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTLCL 9 +TTLCL Sbjct: 547 TTTLCL 552>NP_127499 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTLCL 9 +TTLCL Sbjct: 547 TTTLCL 552>NP_054730 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTLCL 9 +TTLCL Sbjct: 328 TTTLCL 333>XP_005260667 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TSMSTTLC 8 TS+ +T+C Sbjct: 196 TSLQSTMC 203>XP_005260668 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TSMSTTLC 8 TS+ +T+C Sbjct: 196 TSLQSTMC 203>XP_006719855 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMSTTLC 8 S +TTLC Sbjct: 295 SFATTLC 301>XP_006719853 Length = 1809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMSTTLC 8 S +TTLC Sbjct: 199 SFATTLC 205>XP_005252366 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SMSTTLCL 9 +++TT+CL Sbjct: 95 ALTTTVCL 102>XP_005252365 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SMSTTLCL 9 +++TT+CL Sbjct: 167 ALTTTVCL 174>XP_005252364 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SMSTTLCL 9 +++TT+CL Sbjct: 248 ALTTTVCL 255>XP_005247723 Length = 1481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSMSTT 6 TSMSTT Sbjct: 582 TSMSTT 587>XP_005247266 Length = 2189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 +SM+T CL Sbjct: 723 SSMNTVACL 731>XP_005247265 Length = 2211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 +SM+T CL Sbjct: 745 SSMNTVACL 753>NP_002539 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TSMSTTLCL 9 T+MS LC+ Sbjct: 134 TAMSPKLCI 142>NP_001005284 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMSTTLC 8 +MST LC Sbjct: 150 TMSTALC 156>NP_659198 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTLCL 9 +TTLCL Sbjct: 328 TTTLCL 333Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.114 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,419 Number of extensions: 536 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |