Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001092757 16 5631 NP_000522 16 5631 NP_000512 16 5631 NP_056998 16 5631 NP_003310 16 5631 NP_001165763 16 5631 NP_597676 16 5631 NP_001243779 16 5631 NP_596869 16 5631 NP_054790 16 5631 XP_006723818 16 5631 XP_006723817 16 5631 XP_006723816 16 5631 XP_006723815 16 5631 XP_006723814 16 5631 XP_006723813 16 5631 XP_005260405 16 5631 XP_005255403 16 5631 XP_005246888 16 5631 XP_006712788 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 NP_001254479 16 5631 NP_597681 16 5631 NP_001265611 16 7355 NP_775299 16 7355 NP_003235 16 7355 NP_775303 16 7355 NP_775302 16 7355 NP_689957 16 7355 NP_060814 16 7355 NP_775301 16 7355 NP_001265615 16 7355 NP_777480 16 7355 NP_733796 16 7355 NP_001265613 16 7355 NP_775300 16 7355 XP_005258192 16 7355 XP_006717973 16 7355 NP_057629 16 7355 NP_060496 15 9605 NP_001438 15 9605 NP_689870 15 9605 NP_001273548 15 9605 NP_064537 15 9605 NP_001085 15 9605 NP_835258 15 9605 NP_055379 15 9605 NP_001273563 15 9605 NP_001273547 15 9605 NP_001273546 15 9605 NP_001273551 15 9605 NP_001273549 15 9605 XP_005258676 15 9605 XP_005274154 15 9605 XP_005263467 15 9605 XP_005249952 15 9605 XP_005249951 15 9605 XP_006714824 15 9605>NP_001092757 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 353 TSLVFP 358>NP_000522 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SLVFPE 7 SLVFPE Sbjct: 321 SLVFPE 326>NP_000512 Length = 556 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLVFPEIS 9 S+ FPE+S Sbjct: 248 SITFPELS 255>NP_056998 Length = 958 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 300 TSLVFP 305>NP_003310 Length = 26926 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 24586 TSLVFP 24591>NP_001165763 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 334 TSLVFP 339>NP_597676 Length = 27051 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 24711 TSLVFP 24716>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 32010 TSLVFP 32015>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 31083 TSLVFP 31088>NP_054790 Length = 2063 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV PE+S Sbjct: 1557 SSLVHPELS 1565>XP_006723818 Length = 1975 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV PE+S Sbjct: 1557 SSLVHPELS 1565>XP_006723817 Length = 2020 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV PE+S Sbjct: 1514 SSLVHPELS 1522>XP_006723816 Length = 2034 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV PE+S Sbjct: 1557 SSLVHPELS 1565>XP_006723815 Length = 2051 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV PE+S Sbjct: 1545 SSLVHPELS 1553>XP_006723814 Length = 2052 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV PE+S Sbjct: 1546 SSLVHPELS 1554>XP_006723813 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV PE+S Sbjct: 1557 SSLVHPELS 1565>XP_005260405 Length = 2063 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV PE+S Sbjct: 1557 SSLVHPELS 1565>XP_005255403 Length = 744 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 86 TSLVFP 91>XP_005246888 Length = 22663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 20323 TSLVFP 20328>XP_006712788 Length = 24022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 21682 TSLVFP 21687>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 31638 TSLVFP 31643>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 33144 TSLVFP 33149>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 33651 TSLVFP 33656>NP_597681 Length = 27118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSLVFP 6 TSLVFP Sbjct: 24778 TSLVFP 24783>NP_001265611 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 214 TSLMYPE 220>NP_775299 Length = 286 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 225 TSLMYPE 231>NP_003235 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 211 TSLMYPE 217>NP_775303 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 191 TSLMYPE 197>NP_775302 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 191 TSLMYPE 197>NP_689957 Length = 2213 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVFPEI 8 LVFPE+ Sbjct: 1384 LVFPEV 1389>NP_060814 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSLVFPEI 8 TSL++P I Sbjct: 319 TSLIYPAI 326>NP_775301 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 191 TSLMYPE 197>NP_001265615 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 191 TSLMYPE 197>NP_777480 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 191 TSLMYPE 197>NP_733796 Length = 401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 340 TSLMYPE 346>NP_001265613 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 211 TSLMYPE 217>NP_775300 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 211 TSLMYPE 217>XP_005258192 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSLVFPE 7 TSL++PE Sbjct: 191 TSLMYPE 197>XP_006717973 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TSLVFPEI 8 TSL++P I Sbjct: 241 TSLIYPAI 248>NP_057629 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFPEIS 9 VFPE+S Sbjct: 164 VFPEVS 169>NP_060496 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TSLVFPE 7 TSLV PE Sbjct: 471 TSLVVPE 477>NP_001438 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TSLVFPE 7 TSLV PE Sbjct: 3874 TSLVVPE 3880>NP_689870 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 TSLV PE++ Sbjct: 29 TSLVEPEMT 37>NP_001273548 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVFPEI 8 LVFPE+ Sbjct: 34 LVFPEL 39>NP_064537 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVFPEI 8 LVFPE+ Sbjct: 134 LVFPEL 139>NP_001085 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLVFPEIS 9 SLVFP ++ Sbjct: 83 SLVFPAVT 90>NP_835258 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV+P+ S Sbjct: 335 SSLVYPDTS 343>NP_055379 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV+P+ S Sbjct: 340 SSLVYPDTS 348>NP_001273563 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVFPEI 8 LVFPE+ Sbjct: 134 LVFPEL 139>NP_001273547 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVFPEI 8 LVFPE+ Sbjct: 34 LVFPEL 39>NP_001273546 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVFPEI 8 LVFPE+ Sbjct: 34 LVFPEL 39>NP_001273551 Length = 136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVFPEI 8 LVFPE+ Sbjct: 28 LVFPEL 33>NP_001273549 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVFPEI 8 LVFPE+ Sbjct: 34 LVFPEL 39>XP_005258676 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 TSLV PE++ Sbjct: 29 TSLVEPEMT 37>XP_005274154 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TSLVFPE 7 TSLV PE Sbjct: 471 TSLVVPE 477>XP_005263467 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSLVFPEIS 9 +SLV+P+ S Sbjct: 324 SSLVYPDTS 332>XP_005249952 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LVFPEIS 9 LV PEIS Sbjct: 345 LVIPEIS 351>XP_005249951 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LVFPEIS 9 LV PEIS Sbjct: 345 LVIPEIS 351>XP_006714824 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TSLVFPE 7 TSLV PE Sbjct: 3874 TSLVVPE 3880Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.133 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 587,496 Number of extensions: 786 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |