Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 19 869 NP_009297 19 869 NP_071349 17 4312 XP_005257625 17 4312 XP_005257624 17 4312 NP_036221 16 5631 XP_006711818 16 5631 XP_006711817 16 5631 NP_004870 16 7355 NP_001277064 16 7355 NP_001077422 16 7355 NP_071348 16 7355 XP_005271879 16 7355 XP_006712132 16 7355 XP_006712131 16 7355 XP_006712130 16 7355 XP_006712129 16 7355 XP_006712128 16 7355 XP_006712127 16 7355 XP_006712126 16 7355 XP_006712125 16 7355 XP_006712124 16 7355 NP_001191827 15 9605 NP_612470 15 9605 NP_005848 15 9605>NP_005148 Length = 1130 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSLFSALIK 9 T+LFSALIK Sbjct: 597 TNLFSALIK 605>NP_009297 Length = 1149 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSLFSALIK 9 T+LFSALIK Sbjct: 616 TNLFSALIK 624>NP_071349 Length = 1292 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LFSALIK 9 LFSALIK Sbjct: 984 LFSALIK 990>XP_005257625 Length = 1268 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LFSALIK 9 LFSALIK Sbjct: 960 LFSALIK 966>XP_005257624 Length = 1293 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LFSALIK 9 LFSALIK Sbjct: 985 LFSALIK 991>NP_036221 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TSLFSALIK 9 TSLFS++++ Sbjct: 249 TSLFSSILR 257>XP_006711818 Length = 559 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TSLFSALIK 9 TSLFS++++ Sbjct: 70 TSLFSSILR 78>XP_006711817 Length = 559 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TSLFSALIK 9 TSLFS++++ Sbjct: 70 TSLFSSILR 78>NP_004870 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TSLFSAL 7 TS+FSAL Sbjct: 123 TSIFSAL 129>NP_001277064 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TSLFSAL 7 TS+FSAL Sbjct: 109 TSIFSAL 115>NP_001077422 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 1254 TLLFSALI 1261>NP_071348 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 1254 TLLFSALI 1261>XP_005271879 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLFSALI 8 SLFSAL+ Sbjct: 10 SLFSALV 16>XP_006712132 Length = 1136 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 437 TLLFSALI 444>XP_006712131 Length = 1453 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 1254 TLLFSALI 1261>XP_006712130 Length = 1831 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 1132 TLLFSALI 1139>XP_006712129 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 1133 TLLFSALI 1140>XP_006712128 Length = 1879 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 1254 TLLFSALI 1261>XP_006712127 Length = 1909 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 1254 TLLFSALI 1261>XP_006712126 Length = 1913 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 1214 TLLFSALI 1221>XP_006712125 Length = 1952 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 1253 TLLFSALI 1260>XP_006712124 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TSLFSALI 8 T LFSALI Sbjct: 1254 TLLFSALI 1261>NP_001191827 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLFSALI 8 SLFSAL+ Sbjct: 149 SLFSALL 155>NP_612470 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLFSALI 8 SLFSAL+ Sbjct: 175 SLFSALL 181>NP_005848 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LFSALIK 9 L+SALIK Sbjct: 431 LYSALIK 437Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.132 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 312,293 Number of extensions: 545 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |