Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_958441 20 390 NP_958439 20 390 NP_005219 20 390 NP_001009609 17 3301 NP_001184033 17 4312 NP_005924 17 4312 XP_006718903 17 4312 XP_006718902 17 4312 NP_001269667 16 5631 NP_001269668 16 5631 NP_001269670 16 5631 NP_038476 16 5631 NP_110385 16 5631 NP_001002010 16 5631 NP_872589 16 5631 XP_006724269 16 5631 XP_006724268 16 5631 XP_006724267 16 5631 XP_006724266 16 5631 XP_005261522 16 5631 NP_149020 16 7355 XP_006724673 16 7355 XP_005271892 16 7355 XP_005271890 16 7355 XP_006718077 16 7355 XP_006718076 16 7355 NP_114412 16 7355 NP_005436 15 9605 NP_067077 15 9605 NP_005692 15 9605 NP_001036053 15 9605 NP_001036046 15 9605 NP_079461 15 9605 NP_079272 15 9605 NP_006505 15 9605 NP_005722 15 9605 NP_690601 15 9605 XP_006721874 15 9605 XP_006721873 15 9605 XP_005257260 15 9605 XP_005257258 15 9605 XP_006721872 15 9605 XP_006721871 15 9605 XP_006721870 15 9605 XP_006721869 15 9605 XP_006718114 15 9605 XP_006718113 15 9605 XP_006718112 15 9605 XP_006718111 15 9605 XP_006718110 15 9605 XP_006713858 15 9605 XP_005265428 15 9605>NP_958441 Length = 705 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSGEKTKII 9 TSG+KTKII Sbjct: 483 TSGQKTKII 491>NP_958439 Length = 628 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSGEKTKII 9 TSG+KTKII Sbjct: 483 TSGQKTKII 491>NP_005219 Length = 1210 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSGEKTKII 9 TSG+KTKII Sbjct: 483 TSGQKTKII 491>NP_001009609 Length = 141 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TSGEKTK 7 T+GEKTK Sbjct: 8 TNGEKTK 14>NP_001184033 Length = 3972 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GEKTKII 9 GEKTK++ Sbjct: 2308 GEKTKVL 2314>NP_005924 Length = 3969 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GEKTKII 9 GEKTK++ Sbjct: 2305 GEKTKVL 2311>XP_006718903 Length = 2673 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GEKTKII 9 GEKTK++ Sbjct: 1009 GEKTKVL 1015>XP_006718902 Length = 2964 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GEKTKII 9 GEKTK++ Sbjct: 1300 GEKTKVL 1306>NP_001269667 Length = 750 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 SGEK K++ Sbjct: 181 SGEKLKVV 188>NP_001269668 Length = 915 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 SGEK K++ Sbjct: 346 SGEKLKVV 353>NP_001269670 Length = 659 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 SGEK K++ Sbjct: 88 SGEKLKVV 95>NP_038476 Length = 1556 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSGEKTKII 9 T GEK KI+ Sbjct: 609 TPGEKMKIL 617>NP_110385 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 SGEK K++ Sbjct: 346 SGEKLKVV 353>NP_001002010 Length = 336 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 +G KTKII Sbjct: 42 TGRKTKII 49>NP_872589 Length = 1524 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSGEKTKII 9 T GEK KI+ Sbjct: 577 TPGEKMKIL 585>XP_006724269 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 SGEK K++ Sbjct: 69 SGEKLKVV 76>XP_006724268 Length = 742 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 SGEK K++ Sbjct: 173 SGEKLKVV 180>XP_006724267 Length = 743 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 SGEK K++ Sbjct: 173 SGEKLKVV 180>XP_006724266 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 SGEK K++ Sbjct: 308 SGEKLKVV 315>XP_005261522 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 SGEK K++ Sbjct: 346 SGEKLKVV 353>NP_149020 Length = 1395 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSGEKTKII 9 TSGEK+ I+ Sbjct: 407 TSGEKSLIM 415Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSGEKTKI 8 TSGEK+ I Sbjct: 513 TSGEKSLI 520>XP_006724673 Length = 1396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSGEKTKII 9 TSGEK+ I+ Sbjct: 407 TSGEKSLIM 415Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSGEKTKI 8 TSGEK+ I Sbjct: 513 TSGEKSLI 520>XP_005271892 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SGEKTKI 8 SGE+TK+ Sbjct: 165 SGERTKL 171>XP_005271890 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SGEKTKI 8 SGE+TK+ Sbjct: 254 SGERTKL 260>XP_006718077 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SGEKTKI 8 SGE+TK+ Sbjct: 258 SGERTKL 264>XP_006718076 Length = 363 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SGEKTKI 8 SGE+TK+ Sbjct: 269 SGERTKL 275>NP_114412 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SGEKTKI 8 SGE+TK+ Sbjct: 227 SGERTKL 233>NP_005436 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSGEKTK 7 TSGEK++ Sbjct: 248 TSGEKSR 254>NP_067077 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EKTKII 9 EKTKII Sbjct: 212 EKTKII 217>NP_005692 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GEKTKI 8 GEKTK+ Sbjct: 219 GEKTKL 224>NP_001036053 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GEKTKI 8 GEKTK+ Sbjct: 219 GEKTKL 224>NP_001036046 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GEKTKI 8 GEKTK+ Sbjct: 219 GEKTKL 224>NP_079461 Length = 1990 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEKTKII 9 GEKTK + Sbjct: 777 GEKTKFL 783>NP_079272 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 S EKTKI+ Sbjct: 335 SKEKTKIL 342>NP_006505 Length = 1956 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 S EKTKI+ Sbjct: 1501 SEEKTKIL 1508>NP_005722 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SGEKTKII 9 +G+KTK++ Sbjct: 49 NGDKTKVM 56>NP_690601 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SGEKTKII 9 +G+KTK++ Sbjct: 49 NGDKTKVM 56>XP_006721874 Length = 1399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEKTKII 9 GEKTK + Sbjct: 851 GEKTKFL 857>XP_006721873 Length = 1409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEKTKII 9 GEKTK + Sbjct: 851 GEKTKFL 857>XP_005257260 Length = 1990 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEKTKII 9 GEKTK + Sbjct: 777 GEKTKFL 783>XP_005257258 Length = 2000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEKTKII 9 GEKTK + Sbjct: 777 GEKTKFL 783>XP_006721872 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEKTKII 9 GEKTK + Sbjct: 814 GEKTKFL 820>XP_006721871 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEKTKII 9 GEKTK + Sbjct: 814 GEKTKFL 820>XP_006721870 Length = 2064 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEKTKII 9 GEKTK + Sbjct: 851 GEKTKFL 857>XP_006721869 Length = 2074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEKTKII 9 GEKTK + Sbjct: 851 GEKTKFL 857>XP_006718114 Length = 1850 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSGEKTKII 9 +SGE+TK + Sbjct: 225 SSGEQTKAL 233>XP_006718113 Length = 1881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSGEKTKII 9 +SGE+TK + Sbjct: 225 SSGEQTKAL 233>XP_006718112 Length = 1889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSGEKTKII 9 +SGE+TK + Sbjct: 225 SSGEQTKAL 233>XP_006718111 Length = 1892 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSGEKTKII 9 +SGE+TK + Sbjct: 225 SSGEQTKAL 233>XP_006718110 Length = 1893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSGEKTKII 9 +SGE+TK + Sbjct: 225 SSGEQTKAL 233>XP_006713858 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 S EKTKI+ Sbjct: 296 SKEKTKIL 303>XP_005265428 Length = 1959 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGEKTKII 9 S EKTKI+ Sbjct: 1504 SEEKTKIL 1511Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.121 0.291 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 651,589 Number of extensions: 1048 Number of successful extensions: 54 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |