Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 390 NP_036462 20 390 NP_001243397 20 390 XP_005269721 20 390 NP_001127951 17 3301 NP_036586 17 3301 NP_060573 17 3301 NP_001010927 17 3301 XP_005271048 17 3301 NP_057412 16 5631 NP_005676 16 5631 NP_001186136 16 5631 XP_006726511 16 5631 XP_006716291 16 5631 XP_006716247 16 5631 XP_005250778 16 5631 XP_006716246 16 5631 XP_005250777 16 5631 XP_006716245 16 5631 XP_006710245 16 5631 NP_001116212 16 7355 NP_001116214 16 7355 NP_000116 16 7355 NP_001116213 16 7355 NP_001278159 16 7355 NP_001278170 16 7355 NP_001121902 16 7355 NP_056509 16 7355 NP_001121901 16 7355 NP_078926 16 7355 NP_064544 16 7355 NP_001241878 16 7355 XP_005250038 16 7355 XP_005250037 16 7355 XP_006715437 16 7355 XP_006714339 16 7355 XP_006714338 16 7355 NP_996816 15 9605 NP_000923 15 9605 NP_203748 15 9605 NP_001265441 15 9605 NP_001265440 15 9605 NP_004635 15 9605 NP_835260 15 9605 XP_006720769 15 9605 XP_006720768 15 9605 XP_006720767 15 9605 XP_005271772 15 9605 XP_005274109 15 9605 XP_006717206 15 9605 XP_005252108 15 9605 XP_006714523 15 9605 XP_005248329 15 9605 XP_005248328 15 9605 XP_006714522 15 9605 XP_006714521 15 9605 XP_006714520 15 9605 XP_005248327 15 9605 XP_005248326 15 9605 XP_006714519 15 9605 NP_001171812 15 9605 NP_005383 15 9605>NP_001243398 Length = 1781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSDEGSMSA 9 TSDEGSM+A Sbjct: 357 TSDEGSMNA 365>NP_036462 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSDEGSMSA 9 TSDEGSM+A Sbjct: 357 TSDEGSMNA 365>NP_001243397 Length = 1890 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSDEGSMSA 9 TSDEGSM+A Sbjct: 357 TSDEGSMNA 365>XP_005269721 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TSDEGSMSA 9 TSDEGSM+A Sbjct: 357 TSDEGSMNA 365>NP_001127951 Length = 858 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 +SDEGS SA Sbjct: 241 SSDEGSPSA 249>NP_036586 Length = 1701 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SDEGSMSA 9 SDEGS+S+ Sbjct: 1518 SDEGSLSS 1525>NP_060573 Length = 858 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 +SDEGS SA Sbjct: 241 SSDEGSPSA 249>NP_001010927 Length = 626 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SDEGSMSA 9 SDEGS+S+ Sbjct: 443 SDEGSLSS 450>XP_005271048 Length = 858 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 +SDEGS SA Sbjct: 241 SSDEGSPSA 249>NP_057412 Length = 959 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SDEGSMS 8 SD+GSMS Sbjct: 471 SDKGSMS 477>NP_005676 Length = 944 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SDEGSMS 8 SD+GSMS Sbjct: 471 SDKGSMS 477>NP_001186136 Length = 976 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SDEGSMS 8 SD+GSMS Sbjct: 503 SDKGSMS 509>XP_006726511 Length = 531 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 TSDEG+ S+ Sbjct: 286 TSDEGAPSS 294>XP_006716291 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 TSDEG+ S+ Sbjct: 286 TSDEGAPSS 294>XP_006716247 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SDEGSMS 8 SD+GSMS Sbjct: 150 SDKGSMS 156>XP_005250778 Length = 805 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SDEGSMS 8 SD+GSMS Sbjct: 471 SDKGSMS 477>XP_006716246 Length = 960 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SDEGSMS 8 SD+GSMS Sbjct: 471 SDKGSMS 477>XP_005250777 Length = 960 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SDEGSMS 8 SD+GSMS Sbjct: 471 SDKGSMS 477>XP_006716245 Length = 960 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SDEGSMS 8 SD+GSMS Sbjct: 471 SDKGSMS 477>XP_006710245 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 TSDEG+ S+ Sbjct: 286 TSDEGAPSS 294>NP_001116212 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSDEGSMS 8 T+D+GSM+ Sbjct: 168 TNDKGSMA 175>NP_001116214 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSDEGSMS 8 T+D+GSM+ Sbjct: 168 TNDKGSMA 175>NP_000116 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSDEGSMS 8 T+D+GSM+ Sbjct: 168 TNDKGSMA 175>NP_001116213 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSDEGSMS 8 T+D+GSM+ Sbjct: 168 TNDKGSMA 175>NP_001278159 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSDEGSMS 8 T+D+GSM+ Sbjct: 168 TNDKGSMA 175>NP_001278170 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSDEGSMS 8 T+D+GSM+ Sbjct: 168 TNDKGSMA 175>NP_001121902 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DEGSMSA 9 DEGSM A Sbjct: 1010 DEGSMPA 1016>NP_056509 Length = 831 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSDEGSMS 8 T+DEGS S Sbjct: 375 TNDEGSES 382>NP_001121901 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DEGSMSA 9 DEGSM A Sbjct: 1010 DEGSMPA 1016>NP_078926 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSDEGSMS 8 TS+EGS S Sbjct: 190 TSEEGSYS 197>NP_064544 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DEGSMSA 9 DEGSM A Sbjct: 1008 DEGSMPA 1014>NP_001241878 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DEGSMSA 9 DEGSM A Sbjct: 578 DEGSMPA 584>XP_005250038 Length = 831 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSDEGSMS 8 T+DEGS S Sbjct: 375 TNDEGSES 382>XP_005250037 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSDEGSMS 8 T+DEGS S Sbjct: 419 TNDEGSES 426>XP_006715437 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TSDEGSMS 8 T+D+GSM+ Sbjct: 168 TNDKGSMA 175>XP_006714339 Length = 795 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DEGSMSA 9 DEGSM A Sbjct: 777 DEGSMPA 783>XP_006714338 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DEGSMSA 9 DEGSM A Sbjct: 980 DEGSMPA 986>NP_996816 Length = 5202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 T+DEGS+ Sbjct: 4998 TTDEGSV 5004>NP_000923 Length = 1234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 T+DEG+ S+ Sbjct: 574 TTDEGTASS 582>NP_203748 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SDEGSMS 8 S EGSMS Sbjct: 627 SSEGSMS 633>NP_001265441 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 +SDEGS S+ Sbjct: 778 SSDEGSDSS 786>NP_001265440 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 +SDEGS S+ Sbjct: 727 SSDEGSDSS 735>NP_004635 Length = 1082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 +SDEGS S+ Sbjct: 759 SSDEGSDSS 767>NP_835260 Length = 2839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 TS+EGS+ Sbjct: 897 TSEEGSL 903>XP_006720769 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 +SDEGS S+ Sbjct: 715 SSDEGSDSS 723>XP_006720768 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 +SDEGS S+ Sbjct: 715 SSDEGSDSS 723>XP_006720767 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 +SDEGS S+ Sbjct: 729 SSDEGSDSS 737>XP_005271772 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SDEGSMS 8 S EGSMS Sbjct: 628 SSEGSMS 634>XP_005274109 Length = 1234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 T+DEG+ S+ Sbjct: 574 TTDEGTASS 582>XP_006717206 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 +SDEGS+ Sbjct: 699 SSDEGSL 705>XP_005252108 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 +SDEGS+ Sbjct: 734 SSDEGSL 740>XP_006714523 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 TS+EGS+ Sbjct: 566 TSEEGSL 572>XP_005248329 Length = 2699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 TS+EGS+ Sbjct: 723 TSEEGSL 729>XP_005248328 Length = 2699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 TS+EGS+ Sbjct: 723 TSEEGSL 729>XP_006714522 Length = 2719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 TS+EGS+ Sbjct: 897 TSEEGSL 903>XP_006714521 Length = 2781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 TS+EGS+ Sbjct: 805 TSEEGSL 811>XP_006714520 Length = 2802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 TS+EGS+ Sbjct: 826 TSEEGSL 832>XP_005248327 Length = 2839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 TS+EGS+ Sbjct: 897 TSEEGSL 903>XP_005248326 Length = 2873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 TS+EGS+ Sbjct: 897 TSEEGSL 903>XP_006714519 Length = 2873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 TS+EGS+ Sbjct: 897 TSEEGSL 903>NP_001171812 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSDEGSMSA 9 T+DEG+ S+ Sbjct: 507 TTDEGTASS 515>NP_005383 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TSDEGSM 7 +SDEGS+ Sbjct: 733 SSDEGSL 739Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.279 0.0962 0.222 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 635,409 Number of extensions: 780 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |