Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_659206 17 2528 NP_659205 17 2528 NP_006790 17 2528 NP_001137139 16 5631 NP_067034 16 5631 XP_006718569 16 5631 XP_005273977 16 5631 XP_006718568 16 5631 XP_005273975 16 5631 XP_006718566 16 5631 XP_006718565 16 5631 NP_940867 16 7355 NP_002652 16 7355 NP_001243725 16 7355 NP_054772 16 7355 NP_001248326 16 7355 NP_001248327 16 7355 NP_002551 16 7355 XP_006724697 16 7355 XP_006724696 16 7355 XP_006724695 16 7355 XP_006724694 16 7355 XP_006716820 16 7355 XP_006716819 16 7355 XP_006716818 16 7355 NP_002347 16 7355 NP_002267 15 9605 NP_060037 15 9605 NP_031370 15 9605 NP_001192225 15 9605 NP_438169 15 9605 NP_001073159 15 9605 NP_001273389 15 9605 NP_001273388 15 9605 NP_001273390 15 9605 NP_001190173 15 9605 NP_060363 15 9605 XP_005254323 15 9605 XP_005254322 15 9605 XP_006719953 15 9605 XP_005270067 15 9605 XP_005270066 15 9605 XP_005270065 15 9605 XP_006717338 15 9605 XP_006717337 15 9605 XP_006717336 15 9605 XP_006715560 15 9605 XP_006712108 15 9605 XP_005264472 15 9605 XP_005264470 15 9605 XP_005264469 15 9605>NP_659206 Length = 300 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 +YSFRK I Sbjct: 210 KYSFRKDI 217>NP_659205 Length = 312 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 +YSFRK I Sbjct: 208 KYSFRKDI 215>NP_006790 Length = 314 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 +YSFRK I Sbjct: 210 KYSFRKDI 217>NP_001137139 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RYSFRKSI 9 RY F KSI Sbjct: 294 RYRFNKSI 301>NP_067034 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RYSFRKSI 9 RY F KSI Sbjct: 294 RYRFNKSI 301>XP_006718569 Length = 148 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RYSFRKS 8 RY FRKS Sbjct: 139 RYFFRKS 145>XP_005273977 Length = 176 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RYSFRKS 8 RY FRKS Sbjct: 167 RYFFRKS 173>XP_006718568 Length = 215 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RYSFRKS 8 RY FRKS Sbjct: 206 RYFFRKS 212>XP_005273975 Length = 254 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RYSFRKS 8 RY FRKS Sbjct: 245 RYFFRKS 251>XP_006718566 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RYSFRKS 8 RY FRKS Sbjct: 284 RYFFRKS 290>XP_006718565 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RYSFRKS 8 RY FRKS Sbjct: 284 RYFFRKS 290>NP_940867 Length = 1582 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 +YSF K+I Sbjct: 99 KYSFHKNI 106>NP_002652 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRYSFRKS 8 T +SFRKS Sbjct: 29 TVFSFRKS 36>NP_001243725 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYSFRK 7 RYSFR+ Sbjct: 289 RYSFRR 294>NP_054772 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YSFRKSI 9 YS++KSI Sbjct: 319 YSYKKSI 325>NP_001248326 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYSFRK 7 RYSFR+ Sbjct: 246 RYSFRR 251>NP_001248327 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYSFRK 7 RYSFR+ Sbjct: 273 RYSFRR 278>NP_002551 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYSFRK 7 RYSFR+ Sbjct: 273 RYSFRR 278>XP_006724697 Length = 1526 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 +YSF K+I Sbjct: 99 KYSFHKNI 106>XP_006724696 Length = 1534 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 +YSF K+I Sbjct: 99 KYSFHKNI 106>XP_006724695 Length = 1574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 +YSF K+I Sbjct: 99 KYSFHKNI 106>XP_006724694 Length = 1582 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 +YSF K+I Sbjct: 99 KYSFHKNI 106>XP_006716820 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYSFRK 7 RYSF+K Sbjct: 83 RYSFKK 88>XP_006716819 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYSFRK 7 RYSF+K Sbjct: 83 RYSFKK 88>XP_006716818 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYSFRK 7 RYSF+K Sbjct: 83 RYSFKK 88>NP_002347 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RYSFRKS 8 R+SF+KS Sbjct: 157 RFSFKKS 163>NP_002267 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRYSFRKS 8 T YS+R+S Sbjct: 2 TSYSYRQS 9>NP_060037 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRYSFRKS 8 +RY FRK+ Sbjct: 277 SRYIFRKA 284>NP_031370 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RYSFRKSI 9 RYSFR I Sbjct: 585 RYSFRLHI 592>NP_001192225 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RYSFRKSI 9 RYSFR I Sbjct: 70 RYSFRLHI 77>NP_438169 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 R+SFRK + Sbjct: 37 RHSFRKHL 44>NP_001073159 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 R+SFRK + Sbjct: 37 RHSFRKHL 44>NP_001273389 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 R+SFRK + Sbjct: 37 RHSFRKHL 44>NP_001273388 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 R+SFRK + Sbjct: 37 RHSFRKHL 44>NP_001273390 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 R+SFRK + Sbjct: 37 RHSFRKHL 44>NP_001190173 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TRYSFR 6 TRY FR Sbjct: 184 TRYEFR 189>NP_060363 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TRYSFR 6 TRY FR Sbjct: 184 TRYEFR 189>XP_005254323 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 RYSFRK 7 RY FRK Sbjct: 389 RYEFRK 394>XP_005254322 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 RYSFRK 7 RY FRK Sbjct: 392 RYEFRK 397>XP_006719953 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYSFRKSI 9 R+SFRK + Sbjct: 37 RHSFRKHL 44>XP_005270067 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TRYSFR 6 TRY FR Sbjct: 184 TRYEFR 189>XP_005270066 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TRYSFR 6 TRY FR Sbjct: 184 TRYEFR 189>XP_005270065 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TRYSFR 6 TRY FR Sbjct: 184 TRYEFR 189>XP_006717338 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RYSFRKSI 9 RYSFR I Sbjct: 548 RYSFRLHI 555>XP_006717337 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RYSFRKSI 9 RYSFR I Sbjct: 556 RYSFRLHI 563>XP_006717336 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RYSFRKSI 9 RYSFR I Sbjct: 612 RYSFRLHI 619>XP_006715560 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 RYSFRK 7 RY FRK Sbjct: 159 RYKFRK 164>XP_006712108 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRYSFRKS 8 +RY FRK+ Sbjct: 83 SRYIFRKA 90>XP_005264472 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRYSFRKS 8 +RY FRK+ Sbjct: 180 SRYIFRKA 187>XP_005264470 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRYSFRKS 8 +RY FRK+ Sbjct: 180 SRYIFRKA 187>XP_005264469 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRYSFRKS 8 +RY FRK+ Sbjct: 180 SRYIFRKA 187Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.134 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 487,249 Number of extensions: 922 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |