Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 869 NP_001263689 19 869 NP_001119584 19 869 NP_001119586 19 869 NP_001263625 19 869 NP_001119590 19 869 NP_001263690 19 869 NP_001119585 19 869 NP_001263624 19 869 NP_001119588 19 869 NP_001119587 19 869 NP_001119589 19 869 NP_660350 17 2528 NP_001361 17 2528 XP_006717758 17 2528 XP_006712019 17 2528 NP_059111 17 4312 NP_001244123 17 4312 NP_001244124 17 4312 NP_680474 17 4312 NP_079183 17 4312 NP_444256 16 5631 NP_444254 16 5631 NP_444253 16 5631 NP_444255 16 5631 NP_001013680 16 5631 NP_060009 16 5631 XP_006721125 16 5631 XP_005247551 16 5631 XP_005247550 16 5631 XP_006713712 16 5631 XP_005247549 16 5631 NP_060649 16 7355 NP_001273443 16 7355 NP_851997 16 7355 NP_597998 16 7355 NP_065928 16 7355 XP_005256527 16 7355 XP_005256489 16 7355 XP_006721497 16 7355 XP_006719172 16 7355 XP_006719171 16 7355 XP_005253481 16 7355 XP_006714302 16 7355 XP_005263127 16 7355 NP_061908 16 7355 NP_001245258 15 9605 NP_001153777 15 9605 NP_001245260 15 9605 NP_004282 15 9605 NP_079136 15 9605 NP_001243040 15 9605 NP_001243035 15 9605 NP_004249 15 9605 NP_001243038 15 9605 NP_001245259 15 9605 NP_818932 15 9605 NP_036288 15 9605 XP_005260382 15 9605 XP_005260381 15 9605 XP_006723804 15 9605 XP_005260380 15 9605 XP_006723803 15 9605 XP_005260379 15 9605 XP_005260378 15 9605 XP_005260377 15 9605 XP_006723802 15 9605 XP_005260376 15 9605 XP_006723801 15 9605 XP_006723800 15 9605 XP_006723799 15 9605 XP_006723798 15 9605 XP_006721335 15 9605 XP_006721334 15 9605>NP_000537 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 155 TRVRAMAIY 163>NP_001263689 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 116 TRVRAMAIY 124>NP_001119584 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 155 TRVRAMAIY 163>NP_001119586 Length = 341 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 155 TRVRAMAIY 163>NP_001263625 Length = 302 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 116 TRVRAMAIY 124>NP_001119590 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 116 TRVRAMAIY 124>NP_001263690 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 116 TRVRAMAIY 124>NP_001119585 Length = 346 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 155 TRVRAMAIY 163>NP_001263624 Length = 307 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 116 TRVRAMAIY 124>NP_001119588 Length = 209 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 23 TRVRAMAIY 31>NP_001119587 Length = 261 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 23 TRVRAMAIY 31>NP_001119589 Length = 214 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRAMDIY 9 TRVRAM IY Sbjct: 23 TRVRAMAIY 31>NP_660350 Length = 609 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRVRAMD 7 TR+RAMD Sbjct: 342 TRIRAMD 348>NP_001361 Length = 4158 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VRAMDIY 9 VRAMD+Y Sbjct: 2885 VRAMDLY 2891>XP_006717758 Length = 630 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRVRAMD 7 TR+RAMD Sbjct: 363 TRIRAMD 369>XP_006712019 Length = 4158 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VRAMDIY 9 VRAMD+Y Sbjct: 2885 VRAMDLY 2891>NP_059111 Length = 587 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRAMDIY 9 RVR +D+Y Sbjct: 360 RVRTVDVY 367>NP_001244123 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRAMDIY 9 RVR +D+Y Sbjct: 328 RVRTVDVY 335>NP_001244124 Length = 505 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRAMDIY 9 RVR +D+Y Sbjct: 278 RVRTVDVY 285>NP_680474 Length = 287 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRAMDIY 9 RVR +D+Y Sbjct: 209 RVRLLDVY 216>NP_079183 Length = 278 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRAMDIY 9 RVR +D+Y Sbjct: 200 RVRLLDVY 207>NP_444256 Length = 1794 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVRA+++Y Sbjct: 1334 RVRAINVY 1341>NP_444254 Length = 1845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVRA+++Y Sbjct: 1334 RVRAINVY 1341>NP_444253 Length = 1914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVRA+++Y Sbjct: 1403 RVRAINVY 1410>NP_444255 Length = 1863 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVRA+++Y Sbjct: 1403 RVRAINVY 1410>NP_001013680 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TRVRAMDI 8 TR+RA+D+ Sbjct: 115 TRLRALDL 122>NP_060009 Length = 4116 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRAMDIY 9 VRAM++Y Sbjct: 2888 VRAMEVY 2894>XP_006721125 Length = 4070 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRAMDIY 9 VRAM++Y Sbjct: 2842 VRAMEVY 2848>XP_005247551 Length = 1855 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVRA+++Y Sbjct: 1344 RVRAINVY 1351>XP_005247550 Length = 1856 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVRA+++Y Sbjct: 1413 RVRAINVY 1420>XP_006713712 Length = 1923 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVRA+++Y Sbjct: 1413 RVRAINVY 1420>XP_005247549 Length = 1924 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVRA+++Y Sbjct: 1413 RVRAINVY 1420>NP_060649 Length = 1270 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRAMDIY 9 VRA DIY Sbjct: 1243 VRAKDIY 1249>NP_001273443 Length = 1269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRAMDIY 9 VRA DIY Sbjct: 1242 VRAKDIY 1248>NP_851997 Length = 1278 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRAMDIY 9 VRA DIY Sbjct: 1251 VRAKDIY 1257>NP_597998 Length = 170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAMDIY 9 RAMD+Y Sbjct: 135 RAMDLY 140>NP_065928 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRAMDIY 9 VRAM++Y Sbjct: 3200 VRAMELY 3206>XP_005256527 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRAMDIY 9 VRAM++Y Sbjct: 3200 VRAMELY 3206>XP_005256489 Length = 136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAMDIY 9 RAMD+Y Sbjct: 101 RAMDLY 106>XP_006721497 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAMDIY 9 RAMD+Y Sbjct: 180 RAMDLY 185>XP_006719172 Length = 1270 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRAMDIY 9 VRA DIY Sbjct: 1243 VRAKDIY 1249>XP_006719171 Length = 1270 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRAMDIY 9 VRA DIY Sbjct: 1243 VRAKDIY 1249>XP_005253481 Length = 1277 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRAMDIY 9 VRA DIY Sbjct: 1250 VRAKDIY 1256>XP_006714302 Length = 916 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRVRAMD 7 TR+RA+D Sbjct: 601 TRIRAID 607>XP_005263127 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRVRAMD 7 TR+RA+D Sbjct: 601 TRIRAID 607>NP_061908 Length = 1135 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRVRAMD 7 TR+RA+D Sbjct: 601 TRIRAID 607>NP_001245258 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 719 TRVSAMD 725>NP_001153777 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVR++++Y Sbjct: 206 RVRSLELY 213>NP_001245260 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 645 TRVSAMD 651>NP_004282 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAMDIY 9 RA+DIY Sbjct: 36 RALDIY 41>NP_079136 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVR++++Y Sbjct: 182 RVRSLELY 189>NP_001243040 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRAMDIY 9 RVR+ D+Y Sbjct: 88 RVRSGDVY 95>NP_001243035 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRAMDIY 9 RVR+ D+Y Sbjct: 88 RVRSGDVY 95>NP_004249 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRAMDIY 9 RVR+ D+Y Sbjct: 88 RVRSGDVY 95>NP_001243038 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRAMDIY 9 RVR+ D+Y Sbjct: 88 RVRSGDVY 95>NP_001245259 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 539 TRVSAMD 545>NP_818932 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 645 TRVSAMD 651>NP_036288 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 719 TRVSAMD 725>XP_005260382 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 570 TRVSAMD 576>XP_005260381 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 582 TRVSAMD 588>XP_006723804 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 657 TRVSAMD 663>XP_005260380 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 707 TRVSAMD 713>XP_006723803 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 719 TRVSAMD 725>XP_005260379 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 706 TRVSAMD 712>XP_005260378 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 707 TRVSAMD 713>XP_005260377 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 707 TRVSAMD 713>XP_006723802 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 718 TRVSAMD 724>XP_005260376 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 719 TRVSAMD 725>XP_006723801 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 719 TRVSAMD 725>XP_006723800 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 719 TRVSAMD 725>XP_006723799 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 719 TRVSAMD 725>XP_006723798 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRVRAMD 7 TRV AMD Sbjct: 782 TRVSAMD 788>XP_006721335 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVR++++Y Sbjct: 209 RVRSLELY 216>XP_006721334 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RVRAMDIY 9 RVR++++Y Sbjct: 209 RVRSLELY 216Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.142 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 335,051 Number of extensions: 554 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |