Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_001005324 17 2528 NP_758519 17 3301 NP_000751 17 3301 NP_724781 17 3301 XP_005270552 17 3301 XP_005270550 17 3301 XP_005270549 17 3301 NP_064581 17 4312 NP_060497 16 5631 XP_005252552 16 5631 XP_006717527 16 5631 XP_006717526 16 5631 XP_005252551 16 5631 XP_006717525 16 5631 XP_006717524 16 5631 XP_005252547 16 5631 XP_005252546 16 5631 XP_006717523 16 5631 XP_006717522 16 5631 XP_006717521 16 5631 XP_006717520 16 5631 NP_060901 16 7355 NP_612455 16 7355 NP_004000 15 9605 NP_003997 15 9605 NP_000100 15 9605 NP_852111 15 9605 NP_000136 15 9605 NP_001012773 15 9605 NP_848611 15 9605 XP_005262186 15 9605 XP_006724538 15 9605 XP_006724537 15 9605 XP_006724536 15 9605 XP_006724535 15 9605 XP_006724534 15 9605 XP_006724533 15 9605 XP_006724532 15 9605 XP_006724531 15 9605 XP_005267190 15 9605 XP_005267189 15 9605 XP_005267187 15 9605 XP_005267185 15 9605 XP_005267184 15 9605 NP_009055 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 155 TRVRAMAIY 163>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 116 TRVRAMAIY 124>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 155 TRVRAMAIY 163>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 155 TRVRAMAIY 163>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 116 TRVRAMAIY 124>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 116 TRVRAMAIY 124>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 116 TRVRAMAIY 124>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 155 TRVRAMAIY 163>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 116 TRVRAMAIY 124>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 23 TRVRAMAIY 31>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 23 TRVRAMAIY 31>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVHAMAIY 9 TRV AMAIY Sbjct: 23 TRVRAMAIY 31>NP_001005324 Length = 309 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRVHAMAIY 9 TRVH A+Y Sbjct: 193 TRVHKTALY 201>NP_758519 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRVHAMA 7 TR+HAMA Sbjct: 433 TRLHAMA 439>NP_000751 Length = 836 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRVHAMA 7 TR+HAMA Sbjct: 433 TRLHAMA 439>NP_724781 Length = 863 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRVHAMA 7 TR+HAMA Sbjct: 433 TRLHAMA 439>XP_005270552 Length = 731 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRVHAMA 7 TR+HAMA Sbjct: 301 TRLHAMA 307>XP_005270550 Length = 835 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRVHAMA 7 TR+HAMA Sbjct: 433 TRLHAMA 439>XP_005270549 Length = 841 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRVHAMA 7 TR+HAMA Sbjct: 411 TRLHAMA 417>NP_064581 Length = 855 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 HAMAIY 9 HAMA+Y Sbjct: 611 HAMAVY 616>NP_060497 Length = 1039 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 696 TRLHSLALH 704>XP_005252552 Length = 701 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 347 TRLHSLALH 355>XP_006717527 Length = 721 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 367 TRLHSLALH 375>XP_006717526 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 399 TRLHSLALH 407>XP_005252551 Length = 902 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 548 TRLHSLALH 556>XP_006717525 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 708 TRLHSLALH 716>XP_006717524 Length = 1072 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 729 TRLHSLALH 737>XP_005252547 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 724 TRLHSLALH 732>XP_005252546 Length = 1083 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 729 TRLHSLALH 737>XP_006717523 Length = 1095 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 741 TRLHSLALH 749>XP_006717522 Length = 1098 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 744 TRLHSLALH 752>XP_006717521 Length = 1099 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 756 TRLHSLALH 764>XP_006717520 Length = 1110 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TRVHAMAIY 9 TR+H++A++ Sbjct: 756 TRLHSLALH 764>NP_060901 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRVHAMAIY 9 T+ HA+ IY Sbjct: 75 TKKHAIGIY 83>NP_612455 Length = 234 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VHAMAIY 9 +HAMA Y Sbjct: 135 LHAMAFY 141>NP_004000 Length = 3681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 65 TRVHAL 70>NP_003997 Length = 3685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 69 TRVHAL 74>NP_000100 Length = 3677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 61 TRVHAL 66>NP_852111 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TRVHAMAIY 9 TR+H++ Y Sbjct: 202 TRIHSLPSY 210>NP_000136 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TRVHAMAIY 9 TR+H++ Y Sbjct: 228 TRIHSLPSY 236>NP_001012773 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RVHAMAI 8 ++HAMA+ Sbjct: 56 QIHAMAV 62>NP_848611 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RVHAMAI 8 RVH MA+ Sbjct: 447 RVHGMAL 453>XP_005262186 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RVHAMAI 8 ++HAMA+ Sbjct: 56 QIHAMAV 62>XP_006724538 Length = 3575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 69 TRVHAL 74>XP_006724537 Length = 3593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 69 TRVHAL 74>XP_006724536 Length = 3657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 69 TRVHAL 74>XP_006724535 Length = 3660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 69 TRVHAL 74>XP_006724534 Length = 3668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 69 TRVHAL 74>XP_006724533 Length = 3690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 69 TRVHAL 74>XP_006724532 Length = 3695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 61 TRVHAL 66>XP_006724531 Length = 3703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 69 TRVHAL 74>XP_005267190 Length = 3424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 76 TRVHAL 81>XP_005267189 Length = 3425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 90 TRVHAL 95>XP_005267187 Length = 3433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 85 TRVHAL 90>XP_005267185 Length = 3437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 90 TRVHAL 95>XP_005267184 Length = 3438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 90 TRVHAL 95>NP_009055 Length = 3433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRVHAM 6 TRVHA+ Sbjct: 85 TRVHAL 90Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.133 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,193 Number of extensions: 340 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |