Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001360                                                              17    2528
NP_001129971                                                           17    2528
NP_722545                                                              17    2528
NP_001193774                                                           17    2528
NP_001193772                                                           17    2528
NP_001193771                                                           17    2528
NP_001074024                                                           17    2528
NP_001074023                                                           17    2528
XP_006723227                                                           17    2528
XP_005253554                                                           17    2528
XP_005253552                                                           17    2528
XP_005253550                                                           17    2528
XP_005248319                                                           17    2528
NP_112579                                                              17    2528
NP_775819                                                              17    3301
XP_005258685                                                           17    3301
NP_000349                                                              17    4312
NP_001128634                                                           17    4312
NP_000745                                                              17    4312
NP_001128633                                                           17    4312
NP_060338                                                              17    4312
NP_573403                                                              17    4312
NP_001265358                                                           17    4312
NP_877496                                                              17    4312
NP_612354                                                              17    4312
XP_005277341                                                           17    4312
XP_006726208                                                           17    4312
XP_005277339                                                           17    4312
XP_006726356                                                           17    4312
XP_006726355                                                           17    4312
XP_006726320                                                           17    4312
XP_005277107                                                           17    4312
XP_005261286                                                           17    4312
XP_005260559                                                           17    4312
XP_005260558                                                           17    4312
XP_006723918                                                           17    4312
XP_005260557                                                           17    4312
XP_005260556                                                           17    4312
XP_005260555                                                           17    4312
XP_005260554                                                           17    4312
XP_006723917                                                           17    4312
XP_005260553                                                           17    4312
XP_005271664                                                           17    4312
XP_006718929                                                           17    4312
XP_005271663                                                           17    4312
XP_005271662                                                           17    4312
XP_005271661                                                           17    4312
XP_005271660                                                           17    4312
XP_006713882                                                           17    4312
XP_006713881                                                           17    4312
XP_005275805                                                           17    4312
NP_001265357                                                           17    4312
NP_001265356                                                           17    4312
NP_001265355                                                           17    4312
NP_056470                                                              16    5631
NP_001277190                                                           16    5631
NP_001096127                                                           16    5631
XP_006723622                                                           16    5631
XP_005260759                                                           16    5631
XP_006723621                                                           16    5631
NP_694972                                                              16    7355
NP_000148                                                              16    7355
NP_001165283                                                           16    7355
NP_001005742                                                           16    7355
NP_001165282                                                           16    7355
NP_001005741                                                           16    7355
NP_001272390                                                           16    7355
NP_006624                                                              16    7355
NP_001272391                                                           16    7355
NP_001272389                                                           16    7355
NP_001073379                                                           16    7355
NP_001135741                                                           16    7355
NP_000812                                                              16    7355
NP_003464                                                              16    7355
NP_443159                                                              16    7355
NP_998768                                                              16    7355
NP_958934                                                              16    7355
NP_061903                                                              16    7355
NP_001182457                                                           16    7355
XP_006726274                                                           16    7355
XP_006719697                                                           16    7355
XP_006719696                                                           16    7355
XP_006719695                                                           16    7355
XP_005269238                                                           16    7355
XP_005252660                                                           16    7355
XP_006715993                                                           16    7355
XP_006715992                                                           16    7355
XP_005250338                                                           16    7355
XP_005248601                                                           16    7355
XP_005248471                                                           16    7355
XP_005248470                                                           16    7355
XP_006714585                                                           16    7355
XP_005248468                                                           16    7355
XP_005248467                                                           16    7355
XP_005248466                                                           16    7355
XP_005264316                                                           16    7355
XP_006711333                                                           16    7355
NP_002776                                                              16    7355
NP_005536                                                              16    7355
NP_066296                                                              16    7355
NP_005468                                                              15    9605
NP_619639                                                              15    9605
NP_733842                                                              15    9605
NP_065948                                                              15    9605
NP_001243474                                                           15    9605
NP_115822                                                              15    9605
NP_001001414                                                           15    9605
NP_001185                                                              15    9605
NP_066550                                                              15    9605
XP_005276805                                                           15    9605
XP_006719898                                                           15    9605
XP_006714785                                                           15    9605
XP_006714535                                                           15    9605
XP_005245431                                                           15    9605
XP_005245939                                                           15    9605
>NP_001360
          Length = 4624

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    RSLLLNHW 9
            R LLLN W
Sbjct: 3539 RDLLLNDW 3546
>NP_001129971
          Length = 924

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS+LLNH
Sbjct: 805 RSILLNH 811
>NP_722545
          Length = 326

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TRSLLLNHW 9
          T SLL N+W
Sbjct: 30 TTSLLSNYW 38
>NP_001193774
          Length = 275

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TRSLLLNHW 9
          T SLL N+W
Sbjct: 30 TTSLLSNYW 38
>NP_001193772
          Length = 298

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TRSLLLNHW 9
          T SLL N+W
Sbjct: 30 TTSLLSNYW 38
>NP_001193771
          Length = 339

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TRSLLLNHW 9
          T SLL N+W
Sbjct: 43 TTSLLSNYW 51
>NP_001074024
          Length = 362

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TRSLLLNHW 9
          T SLL N+W
Sbjct: 43 TTSLLSNYW 51
>NP_001074023
          Length = 321

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TRSLLLNHW 9
          T SLL N+W
Sbjct: 43 TTSLLSNYW 51
>XP_006723227
          Length = 868

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS+LLNH
Sbjct: 749 RSILLNH 755
>XP_005253554
          Length = 298

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TRSLLLNHW 9
          T SLL N+W
Sbjct: 43 TTSLLSNYW 51
>XP_005253552
          Length = 345

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TRSLLLNHW 9
          T SLL N+W
Sbjct: 43 TTSLLSNYW 51
>XP_005253550
          Length = 386

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TRSLLLNHW 9
          T SLL N+W
Sbjct: 43 TTSLLSNYW 51
>XP_005248319
          Length = 4609

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    RSLLLNHW 9
            R LLLN W
Sbjct: 3524 RDLLLNDW 3531
>NP_112579
          Length = 285

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TRSLLLNHW 9
          T SLL N+W
Sbjct: 30 TTSLLSNYW 38
>NP_775819
          Length = 421

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TRSLLLNHW 9
           TRS L  HW
Sbjct: 337 TRSGLYQHW 345
>XP_005258685
          Length = 413

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TRSLLLNHW 9
           TRS L  HW
Sbjct: 329 TRSGLYQHW 337
>NP_000349
          Length = 683

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   TRSLLLNH 8
           TR+LL NH
Sbjct: 431 TRNLLRNH 438
>NP_001128634
          Length = 271

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  LLLNHW 9
          LLL HW
Sbjct: 24 LLLRHW 29
>NP_000745
          Length = 271

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  LLLNHW 9
          LLL HW
Sbjct: 24 LLLRHW 29
>NP_001128633
          Length = 271

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  LLLNHW 9
          LLL HW
Sbjct: 24 LLLRHW 29
>NP_060338
          Length = 705

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RSL++NH
Sbjct: 374 RSLIINH 380
>NP_573403
          Length = 720

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS++LNH
Sbjct: 264 RSIILNH 270
>NP_001265358
          Length = 478

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 307 LLLQHW 312
>NP_877496
          Length = 720

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS++LNH
Sbjct: 264 RSIILNH 270
>NP_612354
          Length = 1242

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4    LLLNHW 9
            LLL HW
Sbjct: 1221 LLLRHW 1226
>XP_005277341
          Length = 437

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 319 LLLQHW 324
>XP_006726208
          Length = 489

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 318 LLLQHW 323
>XP_005277339
          Length = 490

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 319 LLLQHW 324
>XP_006726356
          Length = 489

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 318 LLLQHW 323
>XP_006726355
          Length = 490

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 319 LLLQHW 324
>XP_006726320
          Length = 489

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 318 LLLQHW 323
>XP_005277107
          Length = 490

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 319 LLLQHW 324
>XP_005261286
          Length = 271

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  LLLNHW 9
          LLL HW
Sbjct: 24 LLLRHW 29
>XP_005260559
          Length = 537

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  RSLLLNH 8
          RS++LNH
Sbjct: 81 RSIILNH 87
>XP_005260558
          Length = 537

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  RSLLLNH 8
          RS++LNH
Sbjct: 81 RSIILNH 87
>XP_006723918
          Length = 632

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS++LNH
Sbjct: 176 RSIILNH 182
>XP_005260557
          Length = 632

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS++LNH
Sbjct: 176 RSIILNH 182
>XP_005260556
          Length = 632

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS++LNH
Sbjct: 176 RSIILNH 182
>XP_005260555
          Length = 632

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS++LNH
Sbjct: 176 RSIILNH 182
>XP_005260554
          Length = 632

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS++LNH
Sbjct: 176 RSIILNH 182
>XP_006723917
          Length = 720

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS++LNH
Sbjct: 264 RSIILNH 270
>XP_005260553
          Length = 720

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS++LNH
Sbjct: 264 RSIILNH 270
>XP_005271664
          Length = 732

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RSL++NH
Sbjct: 374 RSLIINH 380
>XP_006718929
          Length = 756

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RSL++NH
Sbjct: 374 RSLIINH 380
>XP_005271663
          Length = 774

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RSL++NH
Sbjct: 374 RSLIINH 380
>XP_005271662
          Length = 777

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RSL++NH
Sbjct: 374 RSLIINH 380
>XP_005271661
          Length = 777

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RSL++NH
Sbjct: 374 RSLIINH 380
>XP_005271660
          Length = 777

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RSL++NH
Sbjct: 374 RSLIINH 380
>XP_006713882
          Length = 1242

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4    LLLNHW 9
            LLL HW
Sbjct: 1221 LLLRHW 1226
>XP_006713881
          Length = 1024

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4    LLLNHW 9
            LLL HW
Sbjct: 1003 LLLRHW 1008
>XP_005275805
          Length = 309

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  TRSLLLNHW 9
          TRS L N W
Sbjct: 86 TRSCLRNFW 94
>NP_001265357
          Length = 448

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 278 LLLQHW 283
>NP_001265356
          Length = 447

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 278 LLLQHW 283
>NP_001265355
          Length = 448

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 278 LLLQHW 283
>NP_056470
          Length = 751

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RSLLLNHW 9
           RSL  +HW
Sbjct: 669 RSLTRHHW 676
>NP_001277190
          Length = 751

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RSLLLNHW 9
           RSL  +HW
Sbjct: 669 RSLTRHHW 676
>NP_001096127
          Length = 936

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RSLLLNH 8
           RS+L+NH
Sbjct: 818 RSILVNH 824
>XP_006723622
          Length = 471

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RSLLLNHW 9
           RSL  +HW
Sbjct: 389 RSLTRHHW 396
>XP_005260759
          Length = 719

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RSLLLNHW 9
           RSL  +HW
Sbjct: 637 RSLTRHHW 644
>XP_006723621
          Length = 751

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RSLLLNHW 9
           RSL  +HW
Sbjct: 669 RSLTRHHW 676
>NP_694972
          Length = 1330

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RSLLLNHW 9
           +SLLL+ W
Sbjct: 536 KSLLLSKW 543
>NP_000148
          Length = 536

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 325 LLLPHW 330
>NP_001165283
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 276 LLLPHW 281
>NP_001005742
          Length = 536

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 325 LLLPHW 330
>NP_001165282
          Length = 449

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 238 LLLPHW 243
>NP_001005741
          Length = 536

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 325 LLLPHW 330
>NP_001272390
          Length = 1071

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   TRSLLLNH 8
           T SLLL H
Sbjct: 714 THSLLLEH 721
>NP_006624
          Length = 1575

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLLL H
Sbjct: 1218 THSLLLEH 1225
>NP_001272391
          Length = 1071

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   TRSLLLNH 8
           T SLLL H
Sbjct: 714 THSLLLEH 721
>NP_001272389
          Length = 1525

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLLL H
Sbjct: 1168 THSLLLEH 1175
>NP_001073379
          Length = 1722

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLL NH
Sbjct: 1320 TNSLLRNH 1327
>NP_001135741
          Length = 701

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   SLLLNHW 9
           SLL+ HW
Sbjct: 194 SLLVVHW 200
>NP_000812
          Length = 758

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   SLLLNHW 9
           SLL+ HW
Sbjct: 251 SLLVVHW 257
>NP_003464
          Length = 540

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   TRSLLLNH 8
           T SLL NH
Sbjct: 201 TSSLLTNH 208
>NP_443159
          Length = 560

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TRSLLLNHW 9
           TRS  LN W
Sbjct: 513 TRSAGLNKW 521
>NP_998768
          Length = 425

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   RSLLLNH 8
           RSLLL H
Sbjct: 185 RSLLLGH 191
>NP_958934
          Length = 428

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   RSLLLNH 8
           RSL LNH
Sbjct: 149 RSLQLNH 155
>NP_061903
          Length = 1369

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLLN W
Sbjct: 613 LLLNEW 618
>NP_001182457
          Length = 382

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   RSLLLNH 8
           RSL LNH
Sbjct: 145 RSLQLNH 151
>XP_006726274
          Length = 536

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 325 LLLPHW 330
>XP_006719697
          Length = 1658

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLL NH
Sbjct: 1256 TNSLLRNH 1263
>XP_006719696
          Length = 1696

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLL NH
Sbjct: 1256 TNSLLRNH 1263
>XP_006719695
          Length = 1696

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLL NH
Sbjct: 1256 TNSLLRNH 1263
>XP_005269238
          Length = 1696

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLL NH
Sbjct: 1256 TNSLLRNH 1263
>XP_005252660
          Length = 490

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   TRSLLLNH 8
           T SLL NH
Sbjct: 151 TSSLLTNH 158
>XP_006715993
          Length = 330

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  RSLLLNH 8
          RSLLL H
Sbjct: 90 RSLLLGH 96
>XP_006715992
          Length = 387

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   RSLLLNH 8
           RSLLL H
Sbjct: 147 RSLLLGH 153
>XP_005250338
          Length = 418

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   RSLLLNH 8
           RSLLL H
Sbjct: 178 RSLLLGH 184
>XP_005248601
          Length = 899

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLLN W
Sbjct: 613 LLLNEW 618
>XP_005248471
          Length = 1128

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   TRSLLLNH 8
           T SLLL H
Sbjct: 771 THSLLLEH 778
>XP_005248470
          Length = 1518

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLLL H
Sbjct: 1161 THSLLLEH 1168
>XP_006714585
          Length = 1525

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLLL H
Sbjct: 1168 THSLLLEH 1175
>XP_005248468
          Length = 1548

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLLL H
Sbjct: 1191 THSLLLEH 1198
>XP_005248467
          Length = 1548

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLLL H
Sbjct: 1191 THSLLLEH 1198
>XP_005248466
          Length = 1565

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    TRSLLLNH 8
            T SLLL H
Sbjct: 1208 THSLLLEH 1215
>XP_005264316
          Length = 756

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   SLLLNHW 9
           SLL+ HW
Sbjct: 251 SLLVVHW 257
>XP_006711333
          Length = 536

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 325 LLLPHW 330
>NP_002776
          Length = 335

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  SLLLNHW 9
          +LLLN W
Sbjct: 22 ALLLNFW 28
>NP_005536
          Length = 428

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   RSLLLNH 8
           RSL LNH
Sbjct: 149 RSLQLNH 155
>NP_066296
          Length = 428

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  SLLLNHW 9
          +LLLN W
Sbjct: 22 ALLLNFW 28
>NP_005468
          Length = 1203

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 426 LLLCHW 431
>NP_619639
          Length = 4074

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    TRSLLLNHW 9
            T SLLL H+
Sbjct: 2439 TDSLLLGHF 2447
>NP_733842
          Length = 3396

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    TRSLLLNHW 9
            T SLLL H+
Sbjct: 2439 TDSLLLGHF 2447
>NP_065948
          Length = 774

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 259 LLLCHW 264
>NP_001243474
          Length = 1140

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  LLLNHW 9
          LLL HW
Sbjct: 14 LLLCHW 19
>NP_115822
          Length = 1140

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  LLLNHW 9
          LLL HW
Sbjct: 14 LLLCHW 19
>NP_001001414
          Length = 275

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 2  RSLLLNHW 9
          R LLL  W
Sbjct: 70 RQLLLEEW 77
>NP_001185
          Length = 889

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 375 LLLCHW 380
>NP_066550
          Length = 890

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 306 LLLCHW 311
>XP_005276805
          Length = 416

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 259 LLLCHW 264
>XP_006719898
          Length = 763

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RSLLLNHW 9
           RSL L+ W
Sbjct: 755 RSLFLSKW 762
>XP_006714785
          Length = 1109

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  LLLNHW 9
          LLL HW
Sbjct: 14 LLLCHW 19
>XP_006714535
          Length = 613

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  LLLNHW 9
          LLL HW
Sbjct: 29 LLLCHW 34
>XP_005245431
          Length = 416

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLL HW
Sbjct: 259 LLLCHW 264
>XP_005245939
          Length = 343

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   LLLNHW 9
           LLLN W
Sbjct: 336 LLLNSW 341
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.327    0.133    0.505 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 523,977
Number of extensions: 1048
Number of successful extensions: 115
Number of sequences better than 10000.0: 115
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 115
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.1 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package