Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002083 17 3301 XP_006712841 17 3301 XP_006712840 17 3301 NP_006346 17 4312 XP_005248857 17 4312 XP_005248856 17 4312 NP_076951 16 5631 NP_114102 16 5631 NP_057624 16 5631 XP_005259182 16 5631 XP_005265535 16 5631 NP_072047 16 7355 NP_001276103 16 7355 NP_001276105 16 7355 NP_001276104 16 7355 NP_056993 16 7355 NP_036355 16 7355 NP_001155291 16 7355 NP_001123630 16 7355 NP_002283 16 7355 NP_857596 16 7355 XP_005273859 16 7355 XP_005265184 16 7355 XP_005246634 16 7355 XP_006712600 16 7355 XP_005246632 16 7355 XP_006712599 16 7355 XP_005246629 16 7355 XP_005246626 16 7355 NP_001125 15 9605 NP_689829 15 9605 NP_852004 15 9605 NP_001193795 15 9605 NP_000556 15 9605 NP_001244289 15 9605 NP_001167448 15 9605 NP_060110 15 9605 NP_958784 15 9605 NP_981949 15 9605 NP_631895 15 9605 NP_001244290 15 9605 NP_004028 15 9605 NP_005986 15 9605 XP_005251036 15 9605 XP_006715203 15 9605 XP_006715202 15 9605 XP_006715201 15 9605 XP_006715200 15 9605 XP_005249275 15 9605 XP_006715199 15 9605 XP_006713671 15 9605 XP_005245197 15 9605 XP_005245196 15 9605 XP_006711362 15 9605 XP_006711361 15 9605 XP_006710639 15 9605 XP_005270809 15 9605>NP_002083 Length = 480 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TRRYAQESQ 9 TR Y+QES+ Sbjct: 114 TRSYSQESK 122>XP_006712841 Length = 1696 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TRRYAQES 8 TRR++QES Sbjct: 28 TRRHSQES 35>XP_006712840 Length = 1725 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TRRYAQES 8 TRR++QES Sbjct: 28 TRRHSQES 35>NP_006346 Length = 465 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRRYAQESQ 9 TR Y QE+Q Sbjct: 315 TRGYTQENQ 323>XP_005248857 Length = 465 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRRYAQESQ 9 TR Y QE+Q Sbjct: 315 TRGYTQENQ 323>XP_005248856 Length = 465 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRRYAQESQ 9 TR Y QE+Q Sbjct: 315 TRGYTQENQ 323>NP_076951 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YAQESQ 9 YAQESQ Sbjct: 491 YAQESQ 496>NP_114102 Length = 275 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRRYAQE 7 T+RYA+E Sbjct: 201 TKRYAEE 207>NP_057624 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRYAQESQ 9 RRY ESQ Sbjct: 59 RRYGAESQ 66>XP_005259182 Length = 275 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRRYAQE 7 T+RYA+E Sbjct: 201 TKRYAEE 207>XP_005265535 Length = 470 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YAQESQ 9 YAQESQ Sbjct: 460 YAQESQ 465>NP_072047 Length = 723 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRRYAQES 8 TRRYA+ S Sbjct: 510 TRRYAEFS 517>NP_001276103 Length = 656 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRRYAQES 8 TRRYA+ S Sbjct: 443 TRRYAEFS 450>NP_001276105 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRRYAQES 8 TRRYA+ S Sbjct: 321 TRRYAEFS 328>NP_001276104 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRRYAQES 8 TRRYA+ S Sbjct: 385 TRRYAEFS 392>NP_056993 Length = 2371 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRYAQES 8 R YAQES Sbjct: 730 RTYAQES 736>NP_036355 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RRYAQ+ + Sbjct: 739 RRYAQQKR 746>NP_001155291 Length = 1136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RRYAQ+ + Sbjct: 739 RRYAQQKR 746>NP_001123630 Length = 1136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RRYAQ+ + Sbjct: 739 RRYAQQKR 746>NP_002283 Length = 1798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRRYAQESQ 9 TRR A E+Q Sbjct: 1480 TRRQASEAQ 1488>NP_857596 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRRYAQESQ 9 T RYA +SQ Sbjct: 491 TGRYAYQSQ 499>XP_005273859 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRRYAQESQ 9 T RYA +SQ Sbjct: 491 TGRYAYQSQ 499>XP_005265184 Length = 1798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRRYAQESQ 9 TRR A E+Q Sbjct: 1480 TRRQASEAQ 1488>XP_005246634 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RRYAQ+ + Sbjct: 759 RRYAQQKR 766>XP_006712600 Length = 1127 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RRYAQ+ + Sbjct: 759 RRYAQQKR 766>XP_005246632 Length = 1127 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RRYAQ+ + Sbjct: 759 RRYAQQKR 766>XP_006712599 Length = 1136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RRYAQ+ + Sbjct: 739 RRYAQQKR 746>XP_005246629 Length = 1136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RRYAQ+ + Sbjct: 739 RRYAQQKR 746>XP_005246626 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RRYAQ+ + Sbjct: 759 RRYAQQKR 766>NP_001125 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 ++Y QESQ Sbjct: 402 QKYIQESQ 409>NP_689829 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 T+RY QE Sbjct: 215 TKRYMQE 221>NP_852004 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RYAQESQ 9 +Y+QESQ Sbjct: 166 QYSQESQ 172>NP_001193795 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RYAQESQ 9 +Y+QESQ Sbjct: 166 QYSQESQ 172>NP_000556 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RYAQESQ 9 +Y+QESQ Sbjct: 166 QYSQESQ 172>NP_001244289 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TRRY Q+ Sbjct: 266 TRRYLQQ 272>NP_001167448 Length = 1365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TR+Y QE Sbjct: 667 TRKYLQE 673>NP_060110 Length = 1371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TR+Y QE Sbjct: 667 TRKYLQE 673>NP_958784 Length = 4547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RR+AQ+ Q Sbjct: 30 RRWAQDEQ 37>NP_981949 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TRRY Q+ Sbjct: 147 TRRYLQQ 153>NP_631895 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TRRY Q+ Sbjct: 185 TRRYLQQ 191>NP_001244290 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TRRY Q+ Sbjct: 148 TRRYLQQ 154>NP_004028 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TRRY Q+ Sbjct: 266 TRRYLQQ 272>NP_005986 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRRYAQES 8 + RYAQE+ Sbjct: 207 SERYAQEN 214>XP_005251036 Length = 4552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRYAQESQ 9 RR+AQ+ Q Sbjct: 30 RRWAQDEQ 37>XP_006715203 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TR+Y QE Sbjct: 671 TRKYLQE 677>XP_006715202 Length = 966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TR+Y QE Sbjct: 671 TRKYLQE 677>XP_006715201 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TR+Y QE Sbjct: 671 TRKYLQE 677>XP_006715200 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TR+Y QE Sbjct: 671 TRKYLQE 677>XP_005249275 Length = 1421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TR+Y QE Sbjct: 667 TRKYLQE 673>XP_006715199 Length = 1425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TR+Y QE Sbjct: 671 TRKYLQE 677>XP_006713671 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 T+RY QE Sbjct: 68 TKRYMQE 74>XP_005245197 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RYAQESQ 9 +Y+QESQ Sbjct: 166 QYSQESQ 172>XP_005245196 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RYAQESQ 9 +Y+QESQ Sbjct: 166 QYSQESQ 172>XP_006711362 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RYAQESQ 9 +Y+QESQ Sbjct: 166 QYSQESQ 172>XP_006711361 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RYAQESQ 9 +Y+QESQ Sbjct: 166 QYSQESQ 172>XP_006710639 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TRRY Q+ Sbjct: 266 TRRYLQQ 272>XP_005270809 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRRYAQE 7 TRRY Q+ Sbjct: 191 TRRYLQQ 197Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.111 0.278 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 500,937 Number of extensions: 922 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |