Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_055623                                                              18    1482
XP_005247106                                                           18    1482
NP_000419                                                              17    3301
NP_005304                                                              17    3301
NP_005108                                                              17    3301
NP_000619                                                              17    3301
XP_005273250                                                           17    4312
XP_006711517                                                           17    4312
NP_001269607                                                           16    5631
NP_001269606                                                           16    5631
NP_000457                                                              16    5631
NP_955376                                                              16    5631
NP_115597                                                              16    5631
XP_005260633                                                           16    5631
XP_005260631                                                           16    5631
XP_005260630                                                           16    5631
XP_005250490                                                           16    5631
XP_005250486                                                           16    5631
NP_008919                                                              16    7355
NP_114091                                                              16    7355
NP_001902                                                              16    7355
NP_619639                                                              16    7355
NP_733842                                                              16    7355
NP_001265354                                                           16    7355
NP_055423                                                              16    7355
NP_001274739                                                           16    7355
NP_001265352                                                           16    7355
NP_775885                                                              16    7355
NP_443124                                                              16    7355
NP_005481                                                              16    7355
NP_001028200                                                           16    7355
NP_001004060                                                           16    7355
NP_001268661                                                           16    7355
NP_001004067                                                           16    7355
XP_005276585                                                           16    7355
XP_006725258                                                           16    7355
XP_005259529                                                           16    7355
XP_006722665                                                           16    7355
XP_005259524                                                           16    7355
XP_005256139                                                           16    7355
XP_005256138                                                           16    7355
XP_005256137                                                           16    7355
XP_370934                                                              16    7355
XP_006721059                                                           16    7355
XP_005255375                                                           16    7355
XP_005272600                                                           16    7355
XP_006710673                                                           16    7355
XP_006710672                                                           16    7355
XP_006710314                                                           16    7355
XP_001716413                                                           16    7355
NP_001070248                                                           16    7355
NP_055102                                                              16    7355
NP_002040                                                              15    9605
NP_056162                                                              15    9605
NP_065799                                                              15    9605
NP_003743                                                              15    9605
NP_060527                                                              15    9605
NP_001254503                                                           15    9605
NP_001273407                                                           15    9605
NP_001032897                                                           15    9605
NP_079469                                                              15    9605
NP_055864                                                              15    9605
NP_001186071                                                           15    9605
NP_001271337                                                           15    9605
NP_001271336                                                           15    9605
NP_001271335                                                           15    9605
NP_060776                                                              15    9605
NP_001093131                                                           15    9605
NP_060334                                                              15    9605
XP_005257594                                                           15    9605
XP_006722050                                                           15    9605
XP_005255658                                                           15    9605
XP_005255592                                                           15    9605
XP_006718983                                                           15    9605
XP_006718982                                                           15    9605
XP_006718981                                                           15    9605
XP_006718980                                                           15    9605
XP_006718979                                                           15    9605
XP_006716666                                                           15    9605
XP_006716665                                                           15    9605
XP_006713312                                                           15    9605
XP_006712777                                                           15    9605
NP_115828                                                              15    9605
NP_001139500                                                           15    9605
NP_079280                                                              15    9605
NP_839943                                                              15    9605
>NP_055623
          Length = 1054

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           RIRG LPL
Sbjct: 796 RIRGLLPL 803
>XP_005247106
          Length = 1054

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           RIRG LPL
Sbjct: 796 RIRGLLPL 803
>NP_000419
          Length = 1821

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  RGFLPL 9
          RGFLPL
Sbjct: 19 RGFLPL 24
>NP_005304
          Length = 505

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TRIRGFLPL 9
          TR++G +PL
Sbjct: 72 TRLKGIVPL 80
>NP_005108
          Length = 216

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   RGFLPL 9
           RGFLPL
Sbjct: 157 RGFLPL 162
>NP_000619
          Length = 325

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RIRGFLP 8
           ++RGFLP
Sbjct: 190 QVRGFLP 196
>XP_005273250
          Length = 149

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   TRIRGFL 7
           TRI+GFL
Sbjct: 121 TRIQGFL 127
>XP_006711517
          Length = 149

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   TRIRGFL 7
           TRI+GFL
Sbjct: 121 TRIQGFL 127
>NP_001269607
          Length = 1075

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           +RGFLP
Sbjct: 610 LRGFLP 615
>NP_001269606
          Length = 1226

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           +RGFLP
Sbjct: 761 LRGFLP 766
>NP_000457
          Length = 1283

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           +RGFLP
Sbjct: 818 LRGFLP 823
>NP_955376
          Length = 160

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  TRIRGFL 7
          TRI+GF+
Sbjct: 32 TRIKGFI 38
>NP_115597
          Length = 2715

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    IRGFLP 8
            +RGFLP
Sbjct: 2416 LRGFLP 2421
>XP_005260633
          Length = 1364

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    IRGFLP 8
            +RGFLP
Sbjct: 1065 LRGFLP 1070
>XP_005260631
          Length = 2667

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    IRGFLP 8
            +RGFLP
Sbjct: 2368 LRGFLP 2373
>XP_005260630
          Length = 2693

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    IRGFLP 8
            +RGFLP
Sbjct: 2394 LRGFLP 2399
>XP_005250490
          Length = 700

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           +RGFLP
Sbjct: 235 LRGFLP 240
>XP_005250486
          Length = 1243

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           +RGFLP
Sbjct: 778 LRGFLP 783
>NP_008919
          Length = 967

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   RIRGFLPL 9
           RIR F PL
Sbjct: 810 RIRSFSPL 817
>NP_114091
          Length = 721

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           IRG+LP
Sbjct: 314 IRGYLP 319
>NP_001902
          Length = 255

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   TRIRGFLP 8
           TR+  FLP
Sbjct: 229 TRVSSFLP 236
>NP_619639
          Length = 4074

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    TRIRGFL 7
            TRI GFL
Sbjct: 3142 TRISGFL 3148
>NP_733842
          Length = 3396

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    TRIRGFL 7
            TRI GFL
Sbjct: 3142 TRISGFL 3148
>NP_001265354
          Length = 1774

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  RIRGFLP 8
          R+RGF P
Sbjct: 30 RLRGFWP 36
>NP_055423
          Length = 1253

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    TRIRGFL 7
            TRIR FL
Sbjct: 1098 TRIRSFL 1104
>NP_001274739
          Length = 1253

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    TRIRGFL 7
            TRIR FL
Sbjct: 1098 TRIRSFL 1104
>NP_001265352
          Length = 306

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  RIRGFLP 8
          R+RGF P
Sbjct: 30 RLRGFWP 36
>NP_775885
          Length = 1222

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    RIRGFLP 8
            R+RG LP
Sbjct: 1004 RLRGLLP 1010
>NP_443124
          Length = 2459

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RIRGFLP 8
           R+RGF P
Sbjct: 715 RLRGFWP 721
>NP_005481
          Length = 576

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RIRGFLP 8
           R+RGF P
Sbjct: 521 RLRGFRP 527
>NP_001028200
          Length = 822

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   TRIRGFL 7
           TRIR FL
Sbjct: 667 TRIRSFL 673
>NP_001004060
          Length = 1267

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    RIRGFLP 8
            R+RG LP
Sbjct: 1004 RLRGLLP 1010
>NP_001268661
          Length = 723

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           R+RG LP+
Sbjct: 169 RLRGHLPV 176
>NP_001004067
          Length = 1222

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    RIRGFLP 8
            R+RG LP
Sbjct: 1004 RLRGLLP 1010
>XP_005276585
          Length = 741

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   RGFLPL 9
           RGF+PL
Sbjct: 729 RGFVPL 734
>XP_006725258
          Length = 1267

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    RIRGFLP 8
            R+RG LP
Sbjct: 1004 RLRGLLP 1010
>XP_005259529
          Length = 483

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RIRGFLP 8
           R+RGF P
Sbjct: 428 RLRGFRP 434
>XP_006722665
          Length = 485

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RIRGFLP 8
           R+RGF P
Sbjct: 430 RLRGFRP 436
>XP_005259524
          Length = 605

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RIRGFLP 8
           R+RGF P
Sbjct: 550 RLRGFRP 556
>XP_005256139
          Length = 509

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           IRG+LP
Sbjct: 314 IRGYLP 319
>XP_005256138
          Length = 510

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           IRG+LP
Sbjct: 314 IRGYLP 319
>XP_005256137
          Length = 721

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           IRG+LP
Sbjct: 314 IRGYLP 319
>XP_370934
          Length = 741

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   RGFLPL 9
           RGF+PL
Sbjct: 729 RGFVPL 734
>XP_006721059
          Length = 294

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  RIRGFLP 8
          R+RG LP
Sbjct: 76 RLRGLLP 82
>XP_005255375
          Length = 1267

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    RIRGFLP 8
            R+RG LP
Sbjct: 1004 RLRGLLP 1010
>XP_005272600
          Length = 1253

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    TRIRGFL 7
            TRIR FL
Sbjct: 1098 TRIRSFL 1104
>XP_006710673
          Length = 1420

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  RIRGFL 7
          R+RGFL
Sbjct: 91 RVRGFL 96
>XP_006710672
          Length = 1563

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  RIRGFL 7
          R+RGFL
Sbjct: 91 RVRGFL 96
>XP_006710314
          Length = 193

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  RIRGFLP 8
          R+RG LP
Sbjct: 76 RLRGLLP 82
>XP_001716413
          Length = 764

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   RGFLPL 9
           RGF+PL
Sbjct: 752 RGFVPL 757
>NP_001070248
          Length = 991

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RIRGFLP 8
           R+RGF P
Sbjct: 715 RLRGFWP 721
>NP_055102
          Length = 1222

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    RIRGFLP 8
            R+RG LP
Sbjct: 1004 RLRGLLP 1010
>NP_002040
          Length = 413

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           ++RG LPL
Sbjct: 189 KLRGTLPL 196
>NP_056162
          Length = 1052

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   RGFLPL 9
           +GFLPL
Sbjct: 928 QGFLPL 933
>NP_065799
          Length = 1204

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   IRGFLPL 9
           I GFLP+
Sbjct: 548 ITGFLPI 554
>NP_003743
          Length = 913

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           R+RG +PL
Sbjct: 303 RVRGGVPL 310
>NP_060527
          Length = 289

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   IRGFLPL 9
           I GF+PL
Sbjct: 266 ISGFIPL 272
>NP_001254503
          Length = 913

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           R+RG +PL
Sbjct: 303 RVRGGVPL 310
>NP_001273407
          Length = 903

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           R+RG +PL
Sbjct: 293 RVRGGVPL 300
>NP_001032897
          Length = 913

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           R+RG +PL
Sbjct: 303 RVRGGVPL 310
>NP_079469
          Length = 369

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           ++RG LPL
Sbjct: 177 KVRGGLPL 184
>NP_055864
          Length = 914

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           +RGF+P
Sbjct: 550 LRGFMP 555
>NP_001186071
          Length = 913

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           R+RG +PL
Sbjct: 303 RVRGGVPL 310
>NP_001271337
          Length = 157

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3   IRGFLPL 9
           ++GF+PL
Sbjct: 138 LQGFIPL 144
>NP_001271336
          Length = 203

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3   IRGFLPL 9
           ++GF+PL
Sbjct: 184 LQGFIPL 190
>NP_001271335
          Length = 249

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3   IRGFLPL 9
           ++GF+PL
Sbjct: 230 LQGFIPL 236
>NP_060776
          Length = 233

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3   IRGFLPL 9
           ++GF+PL
Sbjct: 214 LQGFIPL 220
>NP_001093131
          Length = 914

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           R+RG +PL
Sbjct: 304 RVRGGVPL 311
>NP_060334
          Length = 995

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRIRGFLPL 9
           +R+RG+L +
Sbjct: 640 SRVRGYLEM 648
>XP_005257594
          Length = 1166

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   IRGFLPL 9
           I GFLP+
Sbjct: 510 ITGFLPI 516
>XP_006722050
          Length = 1196

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   IRGFLPL 9
           I GFLP+
Sbjct: 540 ITGFLPI 546
>XP_005255658
          Length = 470

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           ++RG LPL
Sbjct: 278 KVRGGLPL 285
>XP_005255592
          Length = 914

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RIRGFLPL 9
           R+RG +PL
Sbjct: 304 RVRGGVPL 311
>XP_006718983
          Length = 702

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TRIRGFLPL 9
           T IRG LP+
Sbjct: 224 TGIRGELPI 232
>XP_006718982
          Length = 727

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TRIRGFLPL 9
           T IRG LP+
Sbjct: 224 TGIRGELPI 232
>XP_006718981
          Length = 763

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TRIRGFLPL 9
           T IRG LP+
Sbjct: 224 TGIRGELPI 232
>XP_006718980
          Length = 779

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TRIRGFLPL 9
           T IRG LP+
Sbjct: 224 TGIRGELPI 232
>XP_006718979
          Length = 844

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TRIRGFLPL 9
           T IRG LP+
Sbjct: 224 TGIRGELPI 232
>XP_006716666
          Length = 886

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRIRGFLPL 9
           +R+RG+L +
Sbjct: 531 SRVRGYLEM 539
>XP_006716665
          Length = 943

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRIRGFLPL 9
           +R+RG+L +
Sbjct: 588 SRVRGYLEM 596
>XP_006713312
          Length = 233

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3   IRGFLPL 9
           ++GF+PL
Sbjct: 214 LQGFIPL 220
>XP_006712777
          Length = 703

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IRGFLP 8
           +RGF+P
Sbjct: 339 LRGFMP 344
>NP_115828
          Length = 628

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RIRGFLPL 9
           R+R  LPL
Sbjct: 342 RVRSLLPL 349
>NP_001139500
          Length = 628

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RIRGFLPL 9
           R+R  LPL
Sbjct: 342 RVRSLLPL 349
>NP_079280
          Length = 951

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TRIRGFLPL 9
           T IRG LP+
Sbjct: 224 TGIRGELPI 232
>NP_839943
          Length = 1631

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RIRGFL 7
           R+RGFL
Sbjct: 740 RLRGFL 745
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.342    0.164    0.518 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 531,291
Number of extensions: 1046
Number of successful extensions: 86
Number of sequences better than 10000.0: 86
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 86
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.4 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package