Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_079410 17 4312 XP_005256233 17 4312 XP_005256232 17 4312 XP_005256231 17 4312 XP_005256229 17 4312 XP_005256228 17 4312 XP_005256227 17 4312 XP_006721346 17 4312 XP_005256226 17 4312 XP_006721345 17 4312 XP_006721344 17 4312 XP_006721343 17 4312 XP_005256225 17 4312 NP_055064 16 5631 NP_057430 16 5631 NP_997320 16 5631 NP_001271260 16 5631 NP_001271259 16 5631 XP_005253612 16 5631 XP_006715764 16 5631 XP_006715763 16 5631 XP_006715762 16 5631 XP_005249768 16 5631 XP_006715760 16 5631 XP_006715759 16 5631 XP_006715758 16 5631 XP_005249765 16 5631 XP_006715757 16 5631 XP_006715756 16 5631 XP_006715755 16 5631 NP_037416 16 5631 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_079390 15 9605 XP_006719673 15 9605 XP_005269218 15 9605 XP_005269217 15 9605 XP_006719672 15 9605 XP_005269215 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 155 TRVRAMAIY 163>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 116 TRVRAMAIY 124>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 155 TRVRAMAIY 163>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 155 TRVRAMAIY 163>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 116 TRVRAMAIY 124>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 116 TRVRAMAIY 124>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 116 TRVRAMAIY 124>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 155 TRVRAMAIY 163>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 116 TRVRAMAIY 124>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 23 TRVRAMAIY 31>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 23 TRVRAMAIY 31>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRFRAMAIY 9 TR RAMAIY Sbjct: 23 TRVRAMAIY 31>NP_079410 Length = 2881 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256233 Length = 2391 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1360 TKFRAMA 1366>XP_005256232 Length = 2424 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1393 TKFRAMA 1399>XP_005256231 Length = 2573 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256229 Length = 2881 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256228 Length = 2882 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256227 Length = 2897 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_006721346 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256226 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_006721345 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_006721344 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_006721343 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256225 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRFRAMA 7 T+FRAMA Sbjct: 1867 TKFRAMA 1873>NP_055064 Length = 410 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TRFRAMAI 8 +RFRA+A+ Sbjct: 308 SRFRALAV 315>NP_057430 Length = 367 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TRFRAMAI 8 +RFRA+A+ Sbjct: 308 SRFRALAV 315>NP_997320 Length = 4471 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFRAMAIY 9 R+R MA+Y Sbjct: 1132 RYRTMAMY 1139>NP_001271260 Length = 457 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>NP_001271259 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_005253612 Length = 4589 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFRAMAIY 9 R+R MA+Y Sbjct: 1250 RYRTMAMY 1257>XP_006715764 Length = 260 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_006715763 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_006715762 Length = 345 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_005249768 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_006715760 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_006715759 Length = 498 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_006715758 Length = 531 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_005249765 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_006715757 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_006715756 Length = 581 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>XP_006715755 Length = 588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>NP_037416 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFRAMAIY 9 TRF +AIY Sbjct: 25 TRFPGVAIY 33>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RFRAMAI 8 +FRAMAI Sbjct: 9178 QFRAMAI 9184>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RFRAMAI 8 +FRAMAI Sbjct: 9303 QFRAMAI 9309>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RFRAMAI 8 +FRAMAI Sbjct: 16602 QFRAMAI 16608>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RFRAMAI 8 +FRAMAI Sbjct: 15675 QFRAMAI 15681>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RFRAMAI 8 +FRAMAI Sbjct: 4915 QFRAMAI 4921>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RFRAMAI 8 +FRAMAI Sbjct: 6274 QFRAMAI 6280>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RFRAMAI 8 +FRAMAI Sbjct: 16230 QFRAMAI 16236>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RFRAMAI 8 +FRAMAI Sbjct: 17736 QFRAMAI 17742>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RFRAMAI 8 +FRAMAI Sbjct: 18243 QFRAMAI 18249>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RFRAMAI 8 +FRAMAI Sbjct: 9370 QFRAMAI 9376>NP_079390 Length = 2479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFRAMAIY 9 RF+ MAI+ Sbjct: 937 RFKEMAIF 944>XP_006719673 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFRAMAIY 9 RF+ MAI+ Sbjct: 455 RFKEMAIF 462>XP_005269218 Length = 2009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFRAMAIY 9 RF+ MAI+ Sbjct: 467 RFKEMAIF 474>XP_005269217 Length = 2353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFRAMAIY 9 RF+ MAI+ Sbjct: 968 RFKEMAIF 975>XP_006719672 Length = 2510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFRAMAIY 9 RF+ MAI+ Sbjct: 968 RFKEMAIF 975>XP_005269215 Length = 2510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFRAMAIY 9 RF+ MAI+ Sbjct: 968 RFKEMAIF 975Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.353 0.144 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 240,426 Number of extensions: 223 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |