Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_689549 17 2528 NP_872409 17 2528 XP_006718595 17 2528 NP_002200 17 3301 NP_001107852 17 3301 XP_006721107 17 3301 XP_005255370 17 3301 NP_004372 17 4312 NP_001129625 17 4312 NP_653295 17 4312 XP_005258622 17 4312 NP_004854 16 5631 NP_001186162 16 7355 NP_001129490 16 7355 NP_001278092 16 7355 NP_000111 16 7355 NP_085079 16 7355 NP_000755 16 7355 XP_006716983 16 7355 XP_005248043 16 7355 XP_006713958 16 7355 NP_065824 16 7355 NP_001106832 16 7355 NP_073577 15 9605 NP_001106710 15 9605 NP_852003 15 9605 NP_938010 15 9605 NP_938009 15 9605 NP_115583 15 9605 NP_001275763 15 9605 NP_149079 15 9605 NP_997698 15 9605 NP_001257697 15 9605 NP_689909 15 9605 NP_653286 15 9605 NP_005188 15 9605 NP_001597 15 9605 XP_006723099 15 9605 XP_006722983 15 9605 XP_006717059 15 9605 XP_006715999 15 9605 XP_006715998 15 9605 XP_006715997 15 9605 XP_006711058 15 9605 XP_006711057 15 9605 XP_005270670 15 9605 XP_005270669 15 9605 XP_006710506 15 9605 XP_005270668 15 9605 XP_005270667 15 9605 XP_005270666 15 9605 NP_001078940 15 9605>NP_689549 Length = 1066 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFFKRNLM 9 T FFK NL+ Sbjct: 1049 TNFFKMNLL 1057>NP_872409 Length = 389 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RFFKRNLM 9 RFFK+N++ Sbjct: 210 RFFKQNIL 217>XP_006718595 Length = 505 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RFFKRNLM 9 RFFK+N++ Sbjct: 210 RFFKQNIL 217>NP_002200 Length = 1170 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFKRNL 8 FFKRNL Sbjct: 1116 FFKRNL 1121>NP_001107852 Length = 1086 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFKRNL 8 FFKRNL Sbjct: 1032 FFKRNL 1037>XP_006721107 Length = 1087 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFKRNL 8 FFKRNL Sbjct: 1033 FFKRNL 1038>XP_005255370 Length = 1169 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFKRNL 8 FFKRNL Sbjct: 1115 FFKRNL 1120>NP_004372 Length = 703 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFFKRNLM 9 TRFF NL+ Sbjct: 14 TRFFTDNLL 22>NP_001129625 Length = 700 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRFFKRNLM 9 TRFF NL+ Sbjct: 14 TRFFTDNLL 22>NP_653295 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RFFKRNLM 9 R FK+NLM Sbjct: 197 RSFKKNLM 204>XP_005258622 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RFFKRNLM 9 R FK+NLM Sbjct: 253 RSFKKNLM 260>NP_004854 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRFFKRNL 8 TR+F+R L Sbjct: 446 TRYFRRRL 453>NP_001186162 Length = 120 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FFKRNL 8 F+KRNL Sbjct: 97 FYKRNL 102>NP_001129490 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFFKRNL 8 RF+K NL Sbjct: 372 RFYKENL 378>NP_001278092 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFFKRNL 8 RF+K NL Sbjct: 372 RFYKENL 378>NP_000111 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFFKRNL 8 RF+K NL Sbjct: 372 RFYKENL 378>NP_085079 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRFFKRNLM 9 T F+ +NLM Sbjct: 233 TEFYLKNLM 241>NP_000755 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRFFKRNLM 9 T F+ +NLM Sbjct: 284 TEFYLKNLM 292>XP_006716983 Length = 173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FFKRNL 8 F+KRNL Sbjct: 150 FYKRNL 155>XP_005248043 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRFFKRNLM 9 + FF RNL+ Sbjct: 236 SNFFARNLL 244>XP_006713958 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRFFKRNLM 9 + FF RNL+ Sbjct: 236 SNFFARNLL 244>NP_065824 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRFFKRNLM 9 + FF RNL+ Sbjct: 236 SNFFARNLL 244>NP_001106832 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRFFKRNLM 9 + FF RNL+ Sbjct: 236 SNFFARNLL 244>NP_073577 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 432 TRFFNRD 438>NP_001106710 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 432 TRFFNRD 438>NP_852003 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 29 TRFFNRD 35>NP_938010 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 49 TRFFNRD 55>NP_938009 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 423 TRFFNRD 429>NP_115583 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 +RF KRN Sbjct: 48 SRFLKRN 54>NP_001275763 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 +RF KRN Sbjct: 48 SRFLKRN 54>NP_149079 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RFFKRNLM 9 +FF +N+M Sbjct: 615 KFFNQNIM 622>NP_997698 Length = 2466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 RFFKRN 7 RFF RN Sbjct: 2328 RFFNRN 2333>NP_001257697 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RFFKRNLM 9 +FF +N+M Sbjct: 520 KFFNQNIM 527>NP_689909 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 423 TRFFNRD 429>NP_653286 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 FFKRN 7 FFKRN Sbjct: 248 FFKRN 252>NP_005188 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 FFKRN 7 FFKRN Sbjct: 239 FFKRN 243>NP_001597 Length = 2436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 RFFKRN 7 RFF RN Sbjct: 2298 RFFNRN 2303>XP_006723099 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 FFKRN 7 FFKRN Sbjct: 248 FFKRN 252>XP_006722983 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 +RF KRN Sbjct: 48 SRFLKRN 54>XP_006717059 Length = 2435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 RFFKRN 7 RFF RN Sbjct: 2297 RFFNRN 2302>XP_006715999 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 432 TRFFNRD 438>XP_006715998 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 425 TRFFNRD 431>XP_006715997 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 432 TRFFNRD 438>XP_006711058 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RFFKRNLM 9 +FF +N+M Sbjct: 309 KFFNQNIM 316>XP_006711057 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RFFKRNLM 9 +FF +N+M Sbjct: 616 KFFNQNIM 623>XP_005270670 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 423 TRFFNRD 429>XP_005270669 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 423 TRFFNRD 429>XP_006710506 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 494 TRFFNRD 500>XP_005270668 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 494 TRFFNRD 500>XP_005270667 Length = 1280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 494 TRFFNRD 500>XP_005270666 Length = 1281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRFFKRN 7 TRFF R+ Sbjct: 494 TRFFNRD 500>NP_001078940 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 FFKRN 7 FFKRN Sbjct: 239 FFKRN 243Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.352 0.150 0.454 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,211 Number of extensions: 823 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |