Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001034553 16 5631 NP_055815 16 5631 NP_003310 16 5631 NP_597676 16 5631 NP_001243779 16 5631 NP_596869 16 5631 XP_005253400 16 5631 XP_005253399 16 5631 XP_006719121 16 5631 XP_005246888 16 5631 XP_006712788 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 NP_001254479 16 5631 NP_597681 16 5631 NP_005804 16 7355 NP_055392 16 7355 NP_056510 16 7355 XP_006724278 16 7355 XP_006724277 16 7355 XP_006724276 16 7355 XP_006724275 16 7355 XP_005261529 16 7355 XP_006724274 16 7355 XP_006724273 16 7355 XP_005261528 16 7355 XP_005261527 16 7355 XP_006715122 16 7355 XP_005249068 16 7355 XP_005249067 16 7355 XP_005264294 16 7355 NP_001245261 15 9605 NP_000146 15 9605 NP_006377 15 9605 NP_001091974 15 9605 NP_008832 15 9605 NP_001275707 15 9605 NP_004415 15 9605 NP_003250 15 9605 XP_006720921 15 9605 XP_006720920 15 9605 XP_005255213 15 9605 XP_005255212 15 9605 XP_005254461 15 9605 XP_006720603 15 9605 XP_006720602 15 9605>NP_001034553 Length = 1323 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TRETVTIAT 9 T ET+T+A+ Sbjct: 244 TNETITLAS 252>NP_055815 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRE VT+A Sbjct: 17 TRERVTVA 24>NP_003310 Length = 26926 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRET+T+ Sbjct: 21370 TRETITL 21376>NP_597676 Length = 27051 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRET+T+ Sbjct: 21495 TRETITL 21501>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRET+T+ Sbjct: 28794 TRETITL 28800>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRET+T+ Sbjct: 27867 TRETITL 27873>XP_005253400 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRE VT+A Sbjct: 17 TRERVTVA 24>XP_005253399 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRE VT+A Sbjct: 17 TRERVTVA 24>XP_006719121 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRE VT+A Sbjct: 17 TRERVTVA 24>XP_005246888 Length = 22663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRET+T+ Sbjct: 17107 TRETITL 17113>XP_006712788 Length = 24022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRET+T+ Sbjct: 18466 TRETITL 18472>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRET+T+ Sbjct: 28422 TRETITL 28428>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRET+T+ Sbjct: 29928 TRETITL 29934>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRET+T+ Sbjct: 30435 TRETITL 30441>NP_597681 Length = 27118 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRET+T+ Sbjct: 21562 TRETITL 21568>NP_005804 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRE+VTI Sbjct: 69 TRESVTI 75>NP_055392 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 27 TRETLTYA 34>NP_056510 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 28 TRETLTYA 35>XP_006724278 Length = 978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 64 TRETLTYA 71>XP_006724277 Length = 995 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 64 TRETLTYA 71>XP_006724276 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 27 TRETLTYA 34>XP_006724275 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 64 TRETLTYA 71>XP_005261529 Length = 1095 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 64 TRETLTYA 71>XP_006724274 Length = 1189 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 27 TRETLTYA 34>XP_006724273 Length = 1189 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 27 TRETLTYA 34>XP_005261528 Length = 1189 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 27 TRETLTYA 34>XP_005261527 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 64 TRETLTYA 71>XP_006715122 Length = 832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 28 TRETLTYA 35>XP_005249068 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 28 TRETLTYA 35>XP_005249067 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRETVTIA 8 TRET+T A Sbjct: 28 TRETLTYA 35>XP_005264294 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TRE+VTI Sbjct: 69 TRESVTI 75>NP_001245261 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RETVTIA 8 RET TIA Sbjct: 264 RETATIA 270>NP_000146 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RETVTIA 8 RET TIA Sbjct: 373 RETATIA 379>NP_006377 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRETVTIAT 9 TRE T+A+ Sbjct: 18 TREAATVAS 26>NP_001091974 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRETVTIAT 9 TRE T+A+ Sbjct: 18 TREAATVAS 26>NP_008832 Length = 2548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TR+TVT+ Sbjct: 472 TRKTVTV 478>NP_001275707 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETVTIAT 9 +T+TIAT Sbjct: 532 DTITIAT 538>NP_004415 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETVTIAT 9 +T+TIAT Sbjct: 709 DTITIAT 715>NP_003250 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TRETVTI 7 TRE VTI Sbjct: 313 TRENVTI 319>XP_006720921 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETVTIAT 9 +T+TIAT Sbjct: 708 DTITIAT 714>XP_006720920 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETVTIAT 9 +T+TIAT Sbjct: 710 DTITIAT 716>XP_005255213 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETVTIAT 9 +T+TIAT Sbjct: 761 DTITIAT 767>XP_005255212 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETVTIAT 9 +T+TIAT Sbjct: 762 DTITIAT 768>XP_005254461 Length = 2600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TR+TVT+ Sbjct: 453 TRKTVTV 459>XP_006720603 Length = 2619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TR+TVT+ Sbjct: 472 TRKTVTV 478>XP_006720602 Length = 2619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRETVTI 7 TR+TVT+ Sbjct: 472 TRKTVTV 478Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.113 0.267 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 338,714 Number of extensions: 434 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |