Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 18 1135 XP_006713721 18 1135 NP_056069 17 4312 XP_006716380 17 4312 XP_006716379 17 4312 XP_005273516 17 4312 XP_005273515 17 4312 NP_055633 16 5631 NP_038477 16 5631 NP_002855 16 5631 NP_997254 16 5631 XP_006719271 16 5631 XP_005268661 16 5631 XP_005268660 16 5631 XP_005268659 16 5631 XP_005268657 16 5631 XP_006719270 16 5631 XP_005268656 16 5631 XP_005268654 16 5631 XP_005268653 16 5631 XP_006718461 16 5631 XP_006718460 16 5631 XP_005252508 16 5631 XP_006717511 16 5631 XP_005252507 16 5631 XP_005270463 16 5631 XP_005270462 16 5631 XP_006710373 16 5631 XP_005270461 16 5631 NP_443724 16 5631 NP_001026 16 7355 NP_001191957 16 7355 NP_059136 16 7355 NP_116162 16 7355 NP_001193856 16 7355 XP_005269084 16 7355 XP_005269083 16 7355 XP_006715067 16 7355 XP_006713856 16 7355 XP_005269424 16 7355 XP_006713855 16 7355 XP_005269422 16 7355 XP_006713854 16 7355 XP_005269420 16 7355 XP_005269419 16 7355 XP_006711873 16 7355 XP_006711871 16 7355 XP_006711870 16 7355 XP_006711869 16 7355 XP_006711868 16 7355 XP_006711867 16 7355 XP_006711866 16 7355 XP_006711865 16 7355 NP_000072 15 9605 NP_112503 15 9605 NP_000094 15 9605 NP_689914 15 9605 XP_006724601 15 9605 XP_006720469 15 9605 XP_005254248 15 9605 XP_005254247 15 9605 XP_006711794 15 9605 XP_005273085 15 9605 XP_005273084 15 9605>NP_006209 Length = 1068 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRDRLSEIT 9 TRD LSEIT Sbjct: 536 TRDPLSEIT 544>XP_006713721 Length = 1068 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRDRLSEIT 9 TRD LSEIT Sbjct: 536 TRDPLSEIT 544>NP_056069 Length = 1826 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDRLSEIT 9 RDR SE+T Sbjct: 979 RDRWSEVT 986>XP_006716380 Length = 1762 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDRLSEIT 9 RDR SE+T Sbjct: 915 RDRWSEVT 922>XP_006716379 Length = 1762 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDRLSEIT 9 RDR SE+T Sbjct: 915 RDRWSEVT 922>XP_005273516 Length = 1762 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDRLSEIT 9 RDR SE+T Sbjct: 915 RDRWSEVT 922>XP_005273515 Length = 1805 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDRLSEIT 9 RDR SE+T Sbjct: 979 RDRWSEVT 986>NP_055633 Length = 1216 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TRDRLSEIT 9 ++DRLSE T Sbjct: 911 SQDRLSEAT 919>NP_038477 Length = 1905 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SEI Sbjct: 933 TRDNVSEI 940>NP_002855 Length = 1482 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TRDRLSEIT 9 T +R+SEIT Sbjct: 332 TANRISEIT 340>NP_997254 Length = 908 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DRLSEIT 9 DR+SEIT Sbjct: 548 DRVSEIT 554>XP_006719271 Length = 1555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SEI Sbjct: 952 TRDNVSEI 959>XP_005268661 Length = 1657 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SEI Sbjct: 685 TRDNVSEI 692>XP_005268660 Length = 1875 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SEI Sbjct: 903 TRDNVSEI 910>XP_005268659 Length = 1894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SEI Sbjct: 922 TRDNVSEI 929>XP_005268657 Length = 1903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SEI Sbjct: 931 TRDNVSEI 938>XP_006719270 Length = 1903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SEI Sbjct: 931 TRDNVSEI 938>XP_005268656 Length = 1903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SEI Sbjct: 931 TRDNVSEI 938>XP_005268654 Length = 1923 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SEI Sbjct: 952 TRDNVSEI 959>XP_005268653 Length = 1924 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SEI Sbjct: 952 TRDNVSEI 959>XP_006718461 Length = 1247 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TRDRLSEIT 9 ++DRLSE T Sbjct: 942 SQDRLSEAT 950>XP_006718460 Length = 1392 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TRDRLSEIT 9 ++DRLSE T Sbjct: 1087 SQDRLSEAT 1095>XP_005252508 Length = 908 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DRLSEIT 9 DR+SEIT Sbjct: 548 DRVSEIT 554>XP_006717511 Length = 908 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DRLSEIT 9 DR+SEIT Sbjct: 548 DRVSEIT 554>XP_005252507 Length = 908 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DRLSEIT 9 DR+SEIT Sbjct: 548 DRVSEIT 554>XP_005270463 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRDRLSEIT 9 TRD L E+T Sbjct: 19 TRDLLKELT 27>XP_005270462 Length = 460 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRDRLSEIT 9 TRD L E+T Sbjct: 19 TRDLLKELT 27>XP_006710373 Length = 460 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRDRLSEIT 9 TRD L E+T Sbjct: 19 TRDLLKELT 27>XP_005270461 Length = 460 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRDRLSEIT 9 TRD L E+T Sbjct: 19 TRDLLKELT 27>NP_443724 Length = 460 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRDRLSEIT 9 TRD L E+T Sbjct: 19 TRDLLKELT 27>NP_001026 Length = 4967 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDRLSEI 8 RDR+SE+ Sbjct: 4663 RDRISEL 4669>NP_001191957 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DRLSEIT 9 DRLSEI+ Sbjct: 645 DRLSEIS 651>NP_059136 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DRLSEIT 9 DRLSEI+ Sbjct: 680 DRLSEIS 686>NP_116162 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TRDRLSEI 8 +R+RLSEI Sbjct: 90 SRNRLSEI 97>NP_001193856 Length = 4707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DRLSEIT 9 DR+SE+T Sbjct: 1580 DRISELT 1586>XP_005269084 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DRLSEIT 9 DRLSEI+ Sbjct: 588 DRLSEIS 594>XP_005269083 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DRLSEIT 9 DRLSEI+ Sbjct: 690 DRLSEIS 696>XP_006715067 Length = 4707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DRLSEIT 9 DR+SE+T Sbjct: 1580 DRISELT 1586>XP_006713856 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TRDRLSEI 8 +R+RLSEI Sbjct: 90 SRNRLSEI 97>XP_005269424 Length = 743 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TRDRLSEI 8 +R+RLSEI Sbjct: 90 SRNRLSEI 97>XP_006713855 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TRDRLSEI 8 +R+RLSEI Sbjct: 90 SRNRLSEI 97>XP_005269422 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TRDRLSEI 8 +R+RLSEI Sbjct: 90 SRNRLSEI 97>XP_006713854 Length = 777 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TRDRLSEI 8 +R+RLSEI Sbjct: 90 SRNRLSEI 97>XP_005269420 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TRDRLSEI 8 +R+RLSEI Sbjct: 90 SRNRLSEI 97>XP_005269419 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TRDRLSEI 8 +R+RLSEI Sbjct: 90 SRNRLSEI 97>XP_006711873 Length = 4954 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDRLSEI 8 RDR+SE+ Sbjct: 4650 RDRISEL 4656>XP_006711871 Length = 4906 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDRLSEI 8 RDR+SE+ Sbjct: 4602 RDRISEL 4608>XP_006711870 Length = 4965 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDRLSEI 8 RDR+SE+ Sbjct: 4661 RDRISEL 4667>XP_006711869 Length = 4973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDRLSEI 8 RDR+SE+ Sbjct: 4669 RDRISEL 4675>XP_006711868 Length = 4975 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDRLSEI 8 RDR+SE+ Sbjct: 4671 RDRISEL 4677>XP_006711867 Length = 4977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDRLSEI 8 RDR+SE+ Sbjct: 4673 RDRISEL 4679>XP_006711866 Length = 4984 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDRLSEI 8 RDR+SE+ Sbjct: 4680 RDRISEL 4686>XP_006711865 Length = 4985 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDRLSEI 8 RDR+SE+ Sbjct: 4681 RDRISEL 4687>NP_000072 Length = 3801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TRDRLSEIT 9 TR+++ EIT Sbjct: 3448 TREQVKEIT 3456>NP_112503 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DRLSEIT 9 DRL E+T Sbjct: 173 DRLEEVT 179>NP_000094 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DRLSEIT 9 DRL E+T Sbjct: 173 DRLEEVT 179>NP_689914 Length = 5058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDRLSEI 8 TRD +SE+ Sbjct: 1935 TRDSISEL 1942>XP_006724601 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DRLSEI 8 DRLSEI Sbjct: 786 DRLSEI 791>XP_006720469 Length = 401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DRLSEIT 9 DRL E+T Sbjct: 71 DRLEEVT 77>XP_005254248 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DRLSEIT 9 DRL E+T Sbjct: 173 DRLEEVT 179>XP_005254247 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DRLSEIT 9 DRL E+T Sbjct: 173 DRLEEVT 179>XP_006711794 Length = 3022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TRDRLSEIT 9 TR+++ EIT Sbjct: 2669 TREQVKEIT 2677>XP_005273085 Length = 3755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TRDRLSEIT 9 TR+++ EIT Sbjct: 3402 TREQVKEIT 3410>XP_005273084 Length = 3801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TRDRLSEIT 9 TR+++ EIT Sbjct: 3448 TREQVKEIT 3456Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.128 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 405,769 Number of extensions: 676 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |