Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 20 390 XP_006717989 20 390 NP_055811 18 1935 XP_005247296 18 1935 XP_006713604 18 1935 XP_005247295 18 1935 NP_001124432 18 1935 NP_001276324 17 2528 NP_003313 17 2528 NP_813977 17 2528 NP_003311 17 2528 XP_006718366 17 2528 XP_005253166 17 2528 NP_004915 16 5631 NP_001093 16 5631 NP_001123477 16 5631 NP_001123476 16 5631 XP_005259339 16 5631 XP_005259338 16 5631 XP_006723469 16 5631 NP_001136068 16 7355 NP_000908 16 7355 NP_001136067 16 7355 NP_001017962 16 7355 NP_001161710 16 7355 NP_001161709 16 7355 NP_001161708 16 7355 NP_001265273 16 7355 NP_001094 16 7355 NP_001265272 16 7355 NP_006548 16 7355 NP_009298 16 7355 NP_870987 16 7355 NP_005149 16 7355 NP_001161711 16 7355 NP_001124337 16 7355 XP_005251411 16 7355 XP_005251409 16 7355 XP_005251408 16 7355 XP_006716780 16 7355 XP_005245145 16 7355 NP_001129472 16 7355 NP_000375 15 9605 NP_001245300 15 9605 NP_001095 15 9605 NP_001001331 15 9605 NP_065078 15 9605 XP_006718528 15 9605 XP_006713243 15 9605 XP_006713242 15 9605 XP_006713239 15 9605 XP_005265236 15 9605 XP_006713238 15 9605 XP_005265134 15 9605 XP_005265135 15 9605 XP_005265133 15 9605>NP_000305 Length = 403 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRDKKGVAI 9 TRDKKGV I Sbjct: 160 TRDKKGVTI 168>XP_006717989 Length = 388 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRDKKGVAI 9 TRDKKGV I Sbjct: 145 TRDKKGVTI 153>NP_055811 Length = 1655 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDKKGVAI 9 RDKKGV + Sbjct: 1486 RDKKGVTV 1493>XP_005247296 Length = 1673 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDKKGVAI 9 RDKKGV + Sbjct: 1504 RDKKGVTV 1511>XP_006713604 Length = 1685 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDKKGVAI 9 RDKKGV + Sbjct: 1516 RDKKGVTV 1523>XP_005247295 Length = 1705 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDKKGVAI 9 RDKKGV + Sbjct: 1536 RDKKGVTV 1543>NP_001124432 Length = 1693 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDKKGVAI 9 RDKKGV + Sbjct: 1524 RDKKGVTV 1531>NP_001276324 Length = 489 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRDKKGV 7 TRDKKG+ Sbjct: 257 TRDKKGM 263>NP_003313 Length = 542 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRDKKGV 7 TRDKKG+ Sbjct: 310 TRDKKGM 316>NP_813977 Length = 506 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRDKKGV 7 TRDKKG+ Sbjct: 270 TRDKKGM 276>NP_003311 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRDKKGV 7 TRDKKG+ Sbjct: 325 TRDKKGM 331>XP_006718366 Length = 451 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRDKKGV 7 TRDKKG+ Sbjct: 312 TRDKKGM 318>XP_005253166 Length = 548 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TRDKKGV 7 TRDKKG+ Sbjct: 312 TRDKKGM 318>NP_004915 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 TRD KG++ Sbjct: 756 TRDAKGIS 763>NP_001093 Length = 892 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 TRD KG++ Sbjct: 737 TRDAKGIS 744>NP_001123477 Length = 887 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 TRD KG++ Sbjct: 737 TRDAKGIS 744>NP_001123476 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 TRD KG++ Sbjct: 737 TRDAKGIS 744>XP_005259339 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 TRD KG++ Sbjct: 756 TRDAKGIS 763>XP_005259338 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 TRD KG++ Sbjct: 756 TRDAKGIS 763>XP_006723469 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 TRD KG++ Sbjct: 756 TRDAKGIS 763>NP_001136068 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRDKKGVAI 9 T KKGVA+ Sbjct: 272 TPKKKGVAV 280>NP_000908 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRDKKGVAI 9 T KKGVA+ Sbjct: 272 TPKKKGVAV 280>NP_001136067 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRDKKGVAI 9 T KKGVA+ Sbjct: 272 TPKKKGVAV 280>NP_001017962 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRDKKGVAI 9 T KKGVA+ Sbjct: 272 TPKKKGVAV 280>NP_001161710 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRDKKG 6 TRD+KG Sbjct: 624 TRDRKG 629>NP_001161709 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRDKKG 6 TRD+KG Sbjct: 645 TRDRKG 650>NP_001161708 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRDKKG 6 TRD+KG Sbjct: 624 TRDRKG 629>NP_001265273 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRDKKGV 7 TRD KG+ Sbjct: 536 TRDAKGI 542>NP_001094 Length = 894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRDKKGV 7 TRD KG+ Sbjct: 744 TRDAKGI 750>NP_001265272 Length = 894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRDKKGV 7 TRD KG+ Sbjct: 744 TRDAKGI 750>NP_006548 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 T DKKG++ Sbjct: 174 TEDKKGLS 181>NP_009298 Length = 1182 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRDKKG 6 TRD+KG Sbjct: 645 TRDRKG 650>NP_870987 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 T DKKG++ Sbjct: 174 TEDKKGLS 181>NP_005149 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRDKKG 6 TRD+KG Sbjct: 630 TRDRKG 635>NP_001161711 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRDKKG 6 TRD+KG Sbjct: 609 TRDRKG 614>NP_001124337 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 T DKKG++ Sbjct: 174 TEDKKGLS 181>XP_005251411 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 T DKKG++ Sbjct: 174 TEDKKGLS 181>XP_005251409 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 T DKKG++ Sbjct: 174 TEDKKGLS 181>XP_005251408 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 T DKKG++ Sbjct: 174 TEDKKGLS 181>XP_006716780 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 T DKKG++ Sbjct: 174 TEDKKGLS 181>XP_005245145 Length = 1146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRDKKG 6 TRD+KG Sbjct: 609 TRDRKG 614>NP_001129472 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRDKKG 6 TRD+KG Sbjct: 630 TRDRKG 635>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RDKKGVA 8 +DKKG++ Sbjct: 3992 KDKKGIS 3998>NP_001245300 Length = 944 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 TRD KG++ Sbjct: 794 TRDAKGLS 801>NP_001095 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRDKKGVA 8 TRD KG++ Sbjct: 751 TRDAKGLS 758>NP_001001331 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RDKKGV 7 +DKKGV Sbjct: 299 KDKKGV 304>NP_065078 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDKKGVAI 9 +DKK VAI Sbjct: 108 KDKKEVAI 115>XP_006718528 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TRDKKG 6 TRDK+G Sbjct: 146 TRDKQG 151>XP_006713243 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RDKKGV 7 +DKKGV Sbjct: 299 KDKKGV 304>XP_006713242 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RDKKGV 7 +DKKGV Sbjct: 299 KDKKGV 304>XP_006713239 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RDKKGV 7 +DKKGV Sbjct: 299 KDKKGV 304>XP_005265236 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RDKKGV 7 +DKKGV Sbjct: 299 KDKKGV 304>XP_006713238 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RDKKGV 7 +DKKGV Sbjct: 299 KDKKGV 304>XP_005265134 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDKKGVAI 9 +DKK VAI Sbjct: 108 KDKKEVAI 115>XP_005265135 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDKKGVAI 9 +DKK VAI Sbjct: 108 KDKKEVAI 115>XP_005265133 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDKKGVAI 9 +DKK VAI Sbjct: 108 KDKKEVAI 115Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.134 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 538,736 Number of extensions: 774 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |