Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_071328 17 3301 NP_058544 17 4312 NP_001189788 16 5631 NP_001123513 16 5631 NP_003020 16 5631 NP_001123512 16 5631 NP_892113 16 5631 XP_005259586 16 5631 XP_005245509 16 5631 XP_005245508 16 5631 XP_005245507 16 5631 XP_005245506 16 5631 NP_036567 16 5631 NP_001129947 16 7355 NP_001129946 16 7355 NP_848639 16 7355 NP_001768 16 7355 NP_942088 16 7355 XP_005258911 16 7355 XP_005258910 16 7355 XP_005247966 16 7355 XP_005247965 16 7355 XP_006711604 16 7355 NP_003990 15 9605 NP_036443 15 9605 XP_006717498 15 9605 XP_006717497 15 9605 XP_006714572 15 9605 XP_005248442 15 9605 XP_005248441 15 9605 NP_061993 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQTELTRES 9 TQTEL RES Sbjct: 1874 TQTELMRES 1882>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQTELTRES 9 TQTEL RES Sbjct: 1874 TQTELMRES 1882>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQTELTRES 9 TQTEL RES Sbjct: 1827 TQTELMRES 1835>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQTELTRES 9 TQTEL RES Sbjct: 1906 TQTELMRES 1914>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQTELTRES 9 TQTEL RES Sbjct: 1906 TQTELMRES 1914>NP_071328 Length = 904 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TQTELTRES 9 TQT TRES Sbjct: 687 TQTTCTRES 695>NP_058544 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 176 TRTQITREA 184>NP_001189788 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 28 TRTQVTREA 36>NP_001123513 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 73 TRTQVTREA 81>NP_003020 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 73 TRTQVTREA 81>NP_001123512 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 183 TRTQVTREA 191>NP_892113 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 183 TRTQVTREA 191>XP_005259586 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 17 TRTQVTREA 25>XP_005245509 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 73 TRTQVTREA 81>XP_005245508 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 73 TRTQVTREA 81>XP_005245507 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 183 TRTQVTREA 191>XP_005245506 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 183 TRTQVTREA 191>NP_036567 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQTELTRES 9 T+T++TRE+ Sbjct: 174 TRTQVTREA 182>NP_001129947 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQTELTRES 9 T E+TRES Sbjct: 41 TAKEMTRES 49>NP_001129946 Length = 290 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQTELTRES 9 T E+TRES Sbjct: 80 TAKEMTRES 88>NP_848639 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QTELTR 7 QTELTR Sbjct: 453 QTELTR 458>NP_001768 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TELTRE 8 TELTRE Sbjct: 117 TELTRE 122>NP_942088 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TELTRE 8 TELTRE Sbjct: 117 TELTRE 122>XP_005258911 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QTELTR 7 QTELTR Sbjct: 415 QTELTR 420>XP_005258910 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QTELTR 7 QTELTR Sbjct: 427 QTELTR 432>XP_005247966 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TELTRE 8 TELTRE Sbjct: 117 TELTRE 122>XP_005247965 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TELTRE 8 TELTRE Sbjct: 117 TELTRE 122>XP_006711604 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQTELTRES 9 T E+TRES Sbjct: 145 TAKEMTRES 153>NP_003990 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TQTELTR 7 T+TELT+ Sbjct: 828 TETELTK 834>NP_036443 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQTELTRES 9 T TEL+RE+ Sbjct: 190 TFTELSREN 198>XP_006717498 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQTELTRES 9 T TEL+RE+ Sbjct: 84 TFTELSREN 92>XP_006717497 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQTELTRES 9 T TEL+RE+ Sbjct: 190 TFTELSREN 198>XP_006714572 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TQTELTR 7 T+TELT+ Sbjct: 496 TETELTK 502>XP_005248442 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TQTELTR 7 T+TELT+ Sbjct: 829 TETELTK 835>XP_005248441 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TQTELTR 7 T+TELT+ Sbjct: 829 TETELTK 835>NP_061993 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQTELTRES 9 T+T L RES Sbjct: 406 TETPLDRES 414Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.288 0.101 0.228 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,204 Number of extensions: 667 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |