Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 299 XP_005262424 20 299 NP_001244904 17 3301 NP_001244905 17 3301 NP_001124490 17 3301 NP_001124489 17 3301 NP_001124488 17 3301 NP_001124487 17 3301 NP_036259 17 3301 XP_005251950 17 3301 XP_006717103 17 3301 XP_006717102 17 3301 XP_005251949 17 3301 XP_005251948 17 3301 XP_005251947 17 3301 XP_006717101 17 3301 XP_005251946 17 3301 XP_005251945 17 3301 XP_005251944 17 3301 XP_005251943 17 3301 NP_001135916 16 7355 NP_001135915 16 7355 NP_037444 16 7355 NP_001093646 16 7355 NP_115830 16 7355 NP_079359 16 7355 NP_004188 16 7355 NP_003276 16 7355 XP_005259935 16 7355 XP_005259934 16 7355 XP_005259933 16 7355 XP_005259931 16 7355 XP_005259930 16 7355 XP_006717100 16 7355 XP_006717099 16 7355 NP_777596 15 9605 NP_001265367 15 9605 NP_001073141 15 9605 NP_001165783 15 9605 NP_001155000 15 9605 NP_002661 15 9605 NP_001138791 15 9605 XP_006719840 15 9605 XP_006713725 15 9605 XP_006713724 15 9605 XP_006713723 15 9605>NP_722576 Length = 3080 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TQIKSRDVS 9 TQIKSRD+S Sbjct: 2291 TQIKSRDIS 2299>XP_005262424 Length = 2875 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TQIKSRDVS 9 TQIKSRD+S Sbjct: 2086 TQIKSRDIS 2094>NP_001244904 Length = 954 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 821 QVRSRDIS 828>NP_001244905 Length = 797 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 664 QVRSRDIS 671>NP_001124490 Length = 818 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 685 QVRSRDIS 692>NP_001124489 Length = 837 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 704 QVRSRDIS 711>NP_001124488 Length = 898 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 765 QVRSRDIS 772>NP_001124487 Length = 842 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 709 QVRSRDIS 716>NP_036259 Length = 898 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 765 QVRSRDIS 772>XP_005251950 Length = 850 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 717 QVRSRDIS 724>XP_006717103 Length = 900 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 767 QVRSRDIS 774>XP_006717102 Length = 901 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 768 QVRSRDIS 775>XP_005251949 Length = 908 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 775 QVRSRDIS 782>XP_005251948 Length = 913 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 780 QVRSRDIS 787>XP_005251947 Length = 924 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 791 QVRSRDIS 798>XP_006717101 Length = 932 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 799 QVRSRDIS 806>XP_005251946 Length = 939 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 806 QVRSRDIS 813>XP_005251945 Length = 969 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 836 QVRSRDIS 843>XP_005251944 Length = 990 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 857 QVRSRDIS 864>XP_005251943 Length = 995 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 Q++SRD+S Sbjct: 862 QVRSRDIS 869>NP_001135916 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQIKSRDVS 9 T +KS+DV+ Sbjct: 121 TDVKSQDVA 129>NP_001135915 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQIKSRDVS 9 T +KS+DV+ Sbjct: 121 TDVKSQDVA 129>NP_037444 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSRDV 8 TQ++ RDV Sbjct: 633 TQLRERDV 640>NP_001093646 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSRDV 8 TQ++ RDV Sbjct: 631 TQLRERDV 638>NP_115830 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKSRDVS 9 IKSRD+S Sbjct: 106 IKSRDMS 112>NP_079359 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQIKSRDVS 9 T +KS+DV+ Sbjct: 121 TDVKSQDVA 129>NP_004188 Length = 364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKSRDVS 9 IKSRD+S Sbjct: 106 IKSRDMS 112>NP_003276 Length = 1358 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TQIKSRDVS 9 TQI RDVS Sbjct: 508 TQILVRDVS 516>XP_005259935 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSRDV 8 TQ++ RDV Sbjct: 560 TQLRERDV 567>XP_005259934 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSRDV 8 TQ++ RDV Sbjct: 560 TQLRERDV 567>XP_005259933 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSRDV 8 TQ++ RDV Sbjct: 560 TQLRERDV 567>XP_005259931 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSRDV 8 TQ++ RDV Sbjct: 630 TQLRERDV 637>XP_005259930 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSRDV 8 TQ++ RDV Sbjct: 632 TQLRERDV 639>XP_006717100 Length = 961 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 +++SRD+S Sbjct: 828 EVRSRDIS 835>XP_006717099 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 +++SRD+S Sbjct: 854 EVRSRDIS 861>NP_777596 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKSRDVS 9 ++SRDVS Sbjct: 656 VRSRDVS 662>NP_001265367 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSRDVS 9 TQI S D+S Sbjct: 11 TQILSSDIS 19>NP_001073141 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSRDVS 9 TQI S D+S Sbjct: 11 TQILSSDIS 19>NP_001165783 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 ++KS+D+S Sbjct: 82 ELKSKDIS 89>NP_001155000 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TQIKSRDVS 9 TQ+K D+S Sbjct: 651 TQLKELDIS 659>NP_002661 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 ++KS+D+S Sbjct: 82 ELKSKDIS 89>NP_001138791 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 ++KS+D+S Sbjct: 82 ELKSKDIS 89>XP_006719840 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSRDVS 9 TQI S D+S Sbjct: 11 TQILSSDIS 19>XP_006713725 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 ++KS+D+S Sbjct: 82 ELKSKDIS 89>XP_006713724 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 ++KS+D+S Sbjct: 82 ELKSKDIS 89>XP_006713723 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QIKSRDVS 9 ++KS+D+S Sbjct: 82 ELKSKDIS 89Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.116 0.270 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,937 Number of extensions: 543 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |