Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_001165783 17 3301 NP_002661 17 3301 NP_001138791 17 3301 XP_006713725 17 3301 XP_006713724 17 3301 XP_006713723 17 3301 NP_001265367 16 5631 NP_001073141 16 5631 NP_056023 16 5631 NP_001190985 16 5631 NP_001077094 16 5631 NP_078964 16 5631 NP_597719 16 5631 NP_001275511 16 5631 XP_006722380 16 5631 XP_005258153 16 5631 XP_005258152 16 5631 XP_005258151 16 5631 XP_005258150 16 5631 XP_005258149 16 5631 XP_006719840 16 5631 XP_005252650 16 5631 XP_006717569 16 5631 XP_006717568 16 5631 XP_006717567 16 5631 XP_006713569 16 5631 NP_066267 16 7355 NP_001155000 16 7355 NP_001005191 16 7355 NP_059129 16 7355 XP_006717852 16 7355 XP_006717851 16 7355 XP_006717850 16 7355 XP_006717849 16 7355 XP_006717848 16 7355 XP_006717847 16 7355 XP_006717846 16 7355 XP_006717845 16 7355 NP_000072 15 9605 NP_003391 15 9605 NP_001231611 15 9605 NP_055167 15 9605 XP_006719964 15 9605 XP_006719963 15 9605 XP_006719962 15 9605 XP_006719961 15 9605 XP_006719960 15 9605 XP_005266656 15 9605 XP_006712159 15 9605 XP_006712158 15 9605 XP_005264603 15 9605 XP_005264601 15 9605 XP_006712157 15 9605 XP_006711794 15 9605 XP_005273086 15 9605 XP_005273085 15 9605 XP_005273084 15 9605 NP_004285 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TQIKSKDIS 9 TQIKS+DIS Sbjct: 2291 TQIKSRDIS 2299>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TQIKSKDIS 9 TQIKS+DIS Sbjct: 2086 TQIKSRDIS 2094>NP_001165783 Length = 629 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QIKSKDIS 9 ++KSKDIS Sbjct: 82 ELKSKDIS 89>NP_002661 Length = 629 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QIKSKDIS 9 ++KSKDIS Sbjct: 82 ELKSKDIS 89>NP_001138791 Length = 629 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QIKSKDIS 9 ++KSKDIS Sbjct: 82 ELKSKDIS 89>XP_006713725 Length = 629 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QIKSKDIS 9 ++KSKDIS Sbjct: 82 ELKSKDIS 89>XP_006713724 Length = 629 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QIKSKDIS 9 ++KSKDIS Sbjct: 82 ELKSKDIS 89>XP_006713723 Length = 629 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QIKSKDIS 9 ++KSKDIS Sbjct: 82 ELKSKDIS 89>NP_001265367 Length = 1198 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 TQI S DIS Sbjct: 11 TQILSSDIS 19>NP_001073141 Length = 1198 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 TQI S DIS Sbjct: 11 TQILSSDIS 19>NP_056023 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 +QIK KDI Sbjct: 826 SQIKEKDI 833>NP_001190985 Length = 2039 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 +QIK KDI Sbjct: 803 SQIKEKDI 810>NP_001077094 Length = 2039 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 +QIK KDI Sbjct: 803 SQIKEKDI 810>NP_078964 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIKSKDIS 9 +IK KDIS Sbjct: 238 EIKKKDIS 245>NP_597719 Length = 770 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TQIKSKD 7 TQIK KD Sbjct: 569 TQIKEKD 575>NP_001275511 Length = 653 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TQIKSKD 7 TQIK KD Sbjct: 569 TQIKEKD 575>XP_006722380 Length = 1769 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 +QIK KDI Sbjct: 533 SQIKEKDI 540>XP_005258153 Length = 2037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 +QIK KDI Sbjct: 801 SQIKEKDI 808>XP_005258152 Length = 2060 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 +QIK KDI Sbjct: 824 SQIKEKDI 831>XP_005258151 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 +QIK KDI Sbjct: 826 SQIKEKDI 833>XP_005258150 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 +QIK KDI Sbjct: 826 SQIKEKDI 833>XP_005258149 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 +QIK KDI Sbjct: 826 SQIKEKDI 833>XP_006719840 Length = 1080 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 TQI S DIS Sbjct: 11 TQILSSDIS 19>XP_005252650 Length = 692 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIKSKDIS 9 +IK KDIS Sbjct: 238 EIKKKDIS 245>XP_006717569 Length = 1278 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIKSKDIS 9 +IK KDIS Sbjct: 824 EIKKKDIS 831>XP_006717568 Length = 1314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIKSKDIS 9 +IK KDIS Sbjct: 860 EIKKKDIS 867>XP_006717567 Length = 1385 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIKSKDIS 9 +IK KDIS Sbjct: 931 EIKKKDIS 938>XP_006713569 Length = 341 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TQIKSKD 7 TQIK KD Sbjct: 140 TQIKEKD 146>NP_066267 Length = 4377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 T KSKD+S Sbjct: 2726 THAKSKDMS 2734>NP_001155000 Length = 860 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 TQ+K DIS Sbjct: 651 TQLKELDIS 659>NP_001005191 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIKSKDIS 9 Q +SKDIS Sbjct: 86 QARSKDIS 93>NP_059129 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 TQI+ KD+ Sbjct: 288 TQIEGKDV 295>XP_006717852 Length = 3508 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 T KSKD+S Sbjct: 1857 THAKSKDMS 1865>XP_006717851 Length = 3513 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 T KSKD+S Sbjct: 1862 THAKSKDMS 1870>XP_006717850 Length = 4364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 T KSKD+S Sbjct: 2713 THAKSKDMS 2721>XP_006717849 Length = 4383 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 T KSKD+S Sbjct: 2732 THAKSKDMS 2740>XP_006717848 Length = 4392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 T KSKD+S Sbjct: 2741 THAKSKDMS 2749>XP_006717847 Length = 4395 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 T KSKD+S Sbjct: 2744 THAKSKDMS 2752>XP_006717846 Length = 4396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 T KSKD+S Sbjct: 2745 THAKSKDMS 2753>XP_006717845 Length = 4397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQIKSKDIS 9 T KSKD+S Sbjct: 2746 THAKSKDMS 2754>NP_000072 Length = 3801 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KSKDIS 9 KSKDIS Sbjct: 2879 KSKDIS 2884>NP_003391 Length = 1071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 TQ+KSK + Sbjct: 187 TQVKSKHL 194>NP_001231611 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSKDIS 9 QIK++D+S Sbjct: 46 QIKTEDLS 53>NP_055167 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QIKSKDIS 9 QIK++D+S Sbjct: 44 QIKTEDLS 51>XP_006719964 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQIKSKDIS 9 +QIK+K+I+ Sbjct: 340 SQIKNKEIA 348>XP_006719963 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQIKSKDIS 9 +QIK+K+I+ Sbjct: 340 SQIKNKEIA 348>XP_006719962 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQIKSKDIS 9 +QIK+K+I+ Sbjct: 340 SQIKNKEIA 348>XP_006719961 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQIKSKDIS 9 +QIK+K+I+ Sbjct: 340 SQIKNKEIA 348>XP_006719960 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQIKSKDIS 9 +QIK+K+I+ Sbjct: 340 SQIKNKEIA 348>XP_005266656 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQIKSKDIS 9 +QIK+K+I+ Sbjct: 340 SQIKNKEIA 348>XP_006712159 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 TQ+KSK + Sbjct: 20 TQVKSKHL 27>XP_006712158 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 TQ+KSK + Sbjct: 20 TQVKSKHL 27>XP_005264603 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 TQ+KSK + Sbjct: 56 TQVKSKHL 63>XP_005264601 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 TQ+KSK + Sbjct: 172 TQVKSKHL 179>XP_006712157 Length = 1071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TQIKSKDI 8 TQ+KSK + Sbjct: 187 TQVKSKHL 194>XP_006711794 Length = 3022 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KSKDIS 9 KSKDIS Sbjct: 2100 KSKDIS 2105>XP_005273086 Length = 3264 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KSKDIS 9 KSKDIS Sbjct: 2879 KSKDIS 2884>XP_005273085 Length = 3755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KSKDIS 9 KSKDIS Sbjct: 2833 KSKDIS 2838>XP_005273084 Length = 3801 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KSKDIS 9 KSKDIS Sbjct: 2879 KSKDIS 2884>NP_004285 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQIKSKDIS 9 +QIK+K+I+ Sbjct: 340 SQIKNKEIA 348Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.115 0.261 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 465,824 Number of extensions: 557 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |