Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1482 NP_001185763 18 1482 NP_055459 18 1482 NP_001002811 18 1482 NP_001002812 18 1482 XP_006711719 18 1482 XP_006711717 18 1482 XP_006711716 18 1482 XP_006711715 18 1482 XP_006711714 18 1482 XP_006711713 18 1482 XP_006711712 18 1482 XP_006711711 18 1482 XP_006711710 18 1482 XP_006711709 18 1482 XP_005277503 18 1482 XP_005273038 18 1482 XP_006711708 18 1482 XP_005277500 18 1482 XP_006711707 18 1482 XP_005277499 18 1482 XP_006711706 18 1482 XP_006711705 18 1482 NP_612355 17 3301 NP_001136028 17 3301 NP_036616 17 3301 NP_001136029 17 3301 NP_036617 17 3301 XP_006726657 17 3301 XP_006725285 17 3301 XP_005263588 17 3301 NP_001138344 16 5631 XP_005253936 16 5631 NP_851320 16 7355>NP_001185761 Length = 2240 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 897 TQEVLLLRE 905>NP_001185763 Length = 2362 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 831 TQEVLLLRE 839>NP_055459 Length = 2346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 831 TQEVLLLRE 839>NP_001002811 Length = 1132 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>NP_001002812 Length = 969 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 831 TQEVLLLRE 839>XP_006711719 Length = 2302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 897 TQEVLLLRE 905>XP_006711717 Length = 2385 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 897 TQEVLLLRE 905>XP_006711716 Length = 2411 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 897 TQEVLLLRE 905>XP_006711715 Length = 2428 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 831 TQEVLLLRE 839>XP_006711714 Length = 2429 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 831 TQEVLLLRE 839>XP_006711713 Length = 2432 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 834 TQEVLLLRE 842>XP_006711712 Length = 2473 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>XP_006711711 Length = 2482 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>XP_006711710 Length = 2494 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 897 TQEVLLLRE 905>XP_006711709 Length = 2495 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 897 TQEVLLLRE 905>XP_005277503 Length = 2498 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>XP_005273038 Length = 2509 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>XP_006711708 Length = 2512 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>XP_005277500 Length = 2525 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>XP_006711707 Length = 2553 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>XP_005277499 Length = 2561 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>XP_006711706 Length = 2591 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>XP_006711705 Length = 2592 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ VLLLRE Sbjct: 994 TQEVLLLRE 1002>NP_612355 Length = 634 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 QAVLLLRE 9 +AVLLLRE Sbjct: 139 EAVLLLRE 146>NP_001136028 Length = 725 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQA LLL+E Sbjct: 436 TQATLLLQE 444>NP_036616 Length = 724 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQA LLL+E Sbjct: 435 TQATLLLQE 443>NP_001136029 Length = 638 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQA LLL+E Sbjct: 349 TQATLLLQE 357>NP_036617 Length = 709 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQA LLL+E Sbjct: 420 TQATLLLQE 428>XP_006726657 Length = 633 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 QAVLLLRE 9 +AVLLLRE Sbjct: 139 EAVLLLRE 146>XP_006725285 Length = 633 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 QAVLLLRE 9 +AVLLLRE Sbjct: 139 EAVLLLRE 146>XP_005263588 Length = 667 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 QAVLLLRE 9 +AVLLLRE Sbjct: 139 EAVLLLRE 146>NP_001138344 Length = 308 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TQAVLLLRE 9 TQA L LRE Sbjct: 173 TQAALRLRE 181>XP_005253936 Length = 308 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TQAVLLLRE 9 TQA L LRE Sbjct: 173 TQAALRLRE 181>NP_851320 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TQAVLLLRE 9 TQ+VLLL E Sbjct: 297 TQSVLLLWE 305Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.137 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 343,142 Number of extensions: 403 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |