Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 390 NP_001091680 20 390 NP_001091679 20 390 XP_006713048 20 390 XP_005264943 20 390 NP_056082 17 4312 NP_005015 17 4312 XP_006719362 17 4312 NP_001275950 16 5631 NP_001275949 16 5631 NP_056980 16 5631 NP_659464 16 5631 NP_002171 16 5631 XP_005274034 16 5631 XP_005274033 16 5631 XP_005248961 16 5631 XP_005265273 16 5631 NP_001035203 16 7355 NP_074035 16 7355 NP_001035202 16 7355 NP_002465 16 7355 NP_001028774 16 7355 NP_071353 16 7355 XP_005257627 16 7355 NP_006408 16 7355 NP_056048 16 7355 NP_660288 15 9605 NP_005199 15 9605 NP_036433 15 9605 NP_116313 15 9605 NP_005656 15 9605 NP_001265219 15 9605 NP_001265216 15 9605 NP_001265213 15 9605 NP_060185 15 9605 NP_078920 15 9605 NP_001153416 15 9605 XP_005272515 15 9605 XP_005250782 15 9605 XP_006710953 15 9605 XP_005271239 15 9605 XP_006710952 15 9605 XP_006710951 15 9605 XP_006710950 15 9605 XP_006710949 15 9605 XP_006710948 15 9605 XP_006710947 15 9605 XP_005271237 15 9605 XP_005271236 15 9605>NP_001895 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TQADLMELE 9 TQADLMEL+ Sbjct: 3 TQADLMELD 11>NP_001091680 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TQADLMELE 9 TQADLMEL+ Sbjct: 3 TQADLMELD 11>NP_001091679 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TQADLMELE 9 TQADLMEL+ Sbjct: 3 TQADLMELD 11>XP_006713048 Length = 720 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TQADLMELE 9 TQADLMEL+ Sbjct: 3 TQADLMELD 11>XP_005264943 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TQADLMELE 9 TQADLMEL+ Sbjct: 3 TQADLMELD 11>NP_056082 Length = 1486 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TQADLMEL 8 TQA+L+EL Sbjct: 217 TQAELLEL 224>NP_005015 Length = 397 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQADLMEL 8 T AD+MEL Sbjct: 277 TSADMMEL 284>XP_006719362 Length = 1546 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TQADLMEL 8 TQA+L+EL Sbjct: 277 TQAELLEL 284>NP_001275950 Length = 758 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQADLMELE 9 T+A+L++LE Sbjct: 388 TEAELLQLE 396>NP_001275949 Length = 797 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQADLMELE 9 T+A+L++LE Sbjct: 388 TEAELLQLE 396>NP_056980 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QADLMELE 9 QA+LME E Sbjct: 175 QAELMEFE 182>NP_659464 Length = 814 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQADLMELE 9 T+A+L++LE Sbjct: 388 TEAELLQLE 396>NP_002171 Length = 993 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QADLMELE 9 Q DL+ELE Sbjct: 13 QLDLLELE 20>XP_005274034 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QADLMELE 9 Q DL+ELE Sbjct: 13 QLDLLELE 20>XP_005274033 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QADLMELE 9 Q DL+ELE Sbjct: 13 QLDLLELE 20>XP_005248961 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TQADLMELE 9 T+A+L++LE Sbjct: 388 TEAELLQLE 396>XP_005265273 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QADLMELE 9 QA+LME E Sbjct: 96 QAELMEFE 103>NP_001035203 Length = 1979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 +ADLM+L+ Sbjct: 1693 EADLMQLQ 1700>NP_074035 Length = 1938 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 +ADLM+L+ Sbjct: 1686 EADLMQLQ 1693>NP_001035202 Length = 1945 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 +ADLM+L+ Sbjct: 1693 EADLMQLQ 1700>NP_002465 Length = 1972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 +ADLM+L+ Sbjct: 1686 EADLMQLQ 1693>NP_001028774 Length = 1379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QADLMELE 9 QA+L ELE Sbjct: 1104 QAELQELE 1111>NP_071353 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TQADLMEL 8 TQA LMEL Sbjct: 706 TQAYLMEL 713>XP_005257627 Length = 1013 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TQADLMEL 8 TQA LMEL Sbjct: 538 TQAYLMEL 545>NP_006408 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELE 9 T+ DL+E+E Sbjct: 355 TKGDLIEIE 363>NP_056048 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QADLMELE 9 QA+L ELE Sbjct: 73 QAELQELE 80>NP_660288 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 316 QAELMQLD 323>NP_005199 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQADLMELE 9 TQA+ ELE Sbjct: 3 TQAEQQELE 11>NP_036433 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQADLMEL 8 TQA+LM L Sbjct: 599 TQAELMTL 606>NP_116313 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQADLMELE 9 TQADL+ E Sbjct: 3 TQADLVSQE 11>NP_005656 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 364 QAELMQLD 371>NP_001265219 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQADLMELE 9 TQADL+ E Sbjct: 3 TQADLVSQE 11>NP_001265216 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQADLMELE 9 TQADL+ E Sbjct: 3 TQADLVSQE 11>NP_001265213 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQADLMELE 9 TQADL+ E Sbjct: 3 TQADLVSQE 11>NP_060185 Length = 131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQADLMELE 9 TQADL+ E Sbjct: 3 TQADLVSQE 11>NP_078920 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QADLMEL 8 QAD MEL Sbjct: 591 QADAMEL 597>NP_001153416 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 316 QAELMQLD 323>XP_005272515 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 316 QAELMQLD 323>XP_005250782 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQADLMEL 8 TQA+LM L Sbjct: 599 TQAELMTL 606>XP_006710953 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 183 QAELMQLD 190>XP_005271239 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 275 QAELMQLD 282>XP_006710952 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 361 QAELMQLD 368>XP_006710951 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 361 QAELMQLD 368>XP_006710950 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 361 QAELMQLD 368>XP_006710949 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 361 QAELMQLD 368>XP_006710948 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 361 QAELMQLD 368>XP_006710947 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 361 QAELMQLD 368>XP_005271237 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 320 QAELMQLD 327>XP_005271236 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELE 9 QA+LM+L+ Sbjct: 361 QAELMQLD 368Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.121 0.287 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 479,262 Number of extensions: 950 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |