Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 175 NP_001075109 21 175 NP_001137252 18 1482 NP_057100 18 1482 XP_005257502 18 1482 XP_005257500 18 1482 NP_056155 17 4312 XP_005265063 17 4312 NP_149040 17 4312 NP_056506 16 5631 NP_055749 16 5631 NP_945319 16 5631 XP_006719984 16 5631 XP_006719983 16 5631 XP_006719982 16 5631 XP_006719981 16 5631 XP_006719980 16 5631 XP_005254089 16 5631 XP_006719979 16 5631 NP_002323 16 7355 NP_000785 16 7355 NP_783864 16 7355 NP_001121696 16 7355 NP_001017395 16 7355 XP_005262701 16 7355 XP_006713617 16 7355 XP_006713616 16 7355 XP_006713615 16 7355 XP_006713614 16 7355 XP_006713613 16 7355 XP_006713612 16 7355 XP_006713611 16 7355 XP_006713610 16 7355 XP_006713609 16 7355 XP_006713608 16 7355 XP_006713607 16 7355 XP_006713606 16 7355 XP_006713605 16 7355 NP_001138760 15 9605 NP_647480 15 9605 NP_001120914 15 9605 NP_525124 15 9605 NP_872363 15 9605 XP_005271570 15 9605 XP_005271569 15 9605 XP_006718878 15 9605 XP_005271568 15 9605 XP_006716241 15 9605 XP_005250769 15 9605 XP_005250768 15 9605 XP_005250767 15 9605 NP_001120913 15 9605>NP_008835 Length = 4128 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TNTMDMFVK 9 TNTMD+FVK Sbjct: 3999 TNTMDVFVK 4007>NP_001075109 Length = 4097 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TNTMDMFVK 9 TNTMD+FVK Sbjct: 3968 TNTMDVFVK 3976>NP_001137252 Length = 359 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 T TMD FVK Sbjct: 105 TGTMDAFVK 113>NP_057100 Length = 351 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 T TMD FVK Sbjct: 97 TGTMDAFVK 105>XP_005257502 Length = 336 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 T TMD FVK Sbjct: 82 TGTMDAFVK 90>XP_005257500 Length = 444 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 T TMD FVK Sbjct: 190 TGTMDAFVK 198>NP_056155 Length = 903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TNTMDMFV 8 T+TMD FV Sbjct: 517 TDTMDTFV 524>XP_005265063 Length = 903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TNTMDMFV 8 T+TMD FV Sbjct: 517 TDTMDTFV 524>NP_149040 Length = 475 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TMDMFV 8 TMDMFV Sbjct: 433 TMDMFV 438>NP_056506 Length = 1092 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TNTMDMFVK 9 TNT D+F++ Sbjct: 871 TNTEDLFLE 879>NP_055749 Length = 848 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 TN +MF+K Sbjct: 748 TNVPEMFIK 756>NP_945319 Length = 867 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 TN +MF+K Sbjct: 767 TNVPEMFIK 775>XP_006719984 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 TN +MF+K Sbjct: 494 TNVPEMFIK 502>XP_006719983 Length = 886 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 TN +MF+K Sbjct: 767 TNVPEMFIK 775>XP_006719982 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 TN +MF+K Sbjct: 775 TNVPEMFIK 783>XP_006719981 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 TN +MF+K Sbjct: 793 TNVPEMFIK 801>XP_006719980 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 TN +MF+K Sbjct: 813 TNVPEMFIK 821>XP_005254089 Length = 927 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 TN +MF+K Sbjct: 808 TNVPEMFIK 816>XP_006719979 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TNTMDMFVK 9 TN +MF+K Sbjct: 813 TNVPEMFIK 821>NP_002323 Length = 4544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TNTMDMF 7 +N MDMF Sbjct: 2093 SNNMDMF 2099>NP_000785 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TNTMDMFV 8 +NT D+FV Sbjct: 310 SNTFDVFV 317>NP_783864 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTMDMF 7 NTMD+F Sbjct: 312 NTMDIF 317>NP_001121696 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 335 TNTLDM 340>NP_001017395 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 449 TNTLDM 454>XP_005262701 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTMDMF 7 NTMD+F Sbjct: 312 NTMDIF 317>XP_006713617 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 259 TNTLDM 264>XP_006713616 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 266 TNTLDM 271>XP_006713615 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 276 TNTLDM 281>XP_006713614 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713613 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713612 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713611 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713610 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713609 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713608 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713607 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713606 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713605 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNTMDM 6 TNT+DM Sbjct: 449 TNTLDM 454>NP_001138760 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TNTMDMFV 8 T+T++MF+ Sbjct: 167 TSTLNMFI 174>NP_647480 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TNTMDMFV 8 T+T++MF+ Sbjct: 167 TSTLNMFI 174>NP_001120914 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTMDMFVK 9 N MD+F++ Sbjct: 228 NAMDIFIE 235>NP_525124 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTMDMFVK 9 N MD+F++ Sbjct: 228 NAMDIFIE 235>NP_872363 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NTMDMF 7 NT DMF Sbjct: 865 NTQDMF 870>XP_005271570 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NTMDMF 7 NT DMF Sbjct: 828 NTQDMF 833>XP_005271569 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NTMDMF 7 NT DMF Sbjct: 828 NTQDMF 833>XP_006718878 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NTMDMF 7 NT DMF Sbjct: 865 NTQDMF 870>XP_005271568 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NTMDMF 7 NT DMF Sbjct: 865 NTQDMF 870>XP_006716241 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTMDMFVK 9 N MD+F++ Sbjct: 228 NAMDIFIE 235>XP_005250769 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTMDMFVK 9 N MD+F++ Sbjct: 228 NAMDIFIE 235>XP_005250768 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTMDMFVK 9 N MD+F++ Sbjct: 228 NAMDIFIE 235>XP_005250767 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTMDMFVK 9 N MD+F++ Sbjct: 228 NAMDIFIE 235>NP_001120913 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTMDMFVK 9 N MD+F++ Sbjct: 228 NAMDIFIE 235Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.127 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 385,082 Number of extensions: 607 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |