Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_919047 20 509 XP_005250598 20 509 NP_443086 18 1935 NP_060862 17 3301 NP_705833 17 3301 XP_005263172 17 3301 XP_005247174 17 3301 XP_006718546 17 4312 NP_055992 17 4312 NP_055844 16 5631 NP_001139332 16 5631 NP_115766 16 5631 NP_001363 16 5631 XP_006721528 16 5631 NP_001139333 16 5631 NP_004653 16 5631 NP_000024 16 7355 NP_001265544 16 7355 NP_115796 16 7355 NP_001265542 16 7355 NP_002578 16 7355 XP_005268513 16 7355 XP_005268512 16 7355 XP_005268511 16 7355 XP_005268510 16 7355 XP_005268509 16 7355 NP_060420 15 9605 NP_612486 15 9605 NP_001073932 15 9605 NP_001368 15 9605 NP_001157281 15 9605 NP_653319 15 9605 NP_001269524 15 9605 NP_067004 15 9605 NP_001269518 15 9605 NP_001269519 15 9605 NP_001230271 15 9605 NP_001269523 15 9605 NP_001269520 15 9605 NP_542394 15 9605 NP_001074008 15 9605 NP_277045 15 9605 NP_001271332 15 9605 NP_079030 15 9605 XP_006725317 15 9605 XP_005257548 15 9605 XP_005256511 15 9605 XP_005254235 15 9605 XP_005254233 15 9605 XP_005254234 15 9605 XP_006718966 15 9605 XP_005248658 15 9605 XP_006713578 15 9605 XP_006712502 15 9605 XP_006712501 15 9605 XP_005245443 15 9605>NP_919047 Length = 520 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TNRTLLQRL 9 TNRTLLQ+L Sbjct: 346 TNRTLLQQL 354>XP_005250598 Length = 457 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TNRTLLQRL 9 TNRTLLQ+L Sbjct: 283 TNRTLLQQL 291>NP_443086 Length = 519 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 NRTLLQRL 9 NRTLLQ+L Sbjct: 343 NRTLLQQL 350>NP_060862 Length = 2104 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TNRTLLQRL 9 TNRTLL+++ Sbjct: 1775 TNRTLLKQV 1783>NP_705833 Length = 2970 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TNRTLLQR 8 +NRTL+QR Sbjct: 416 SNRTLVQR 423>XP_005263172 Length = 2104 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TNRTLLQRL 9 TNRTLL+++ Sbjct: 1775 TNRTLLKQV 1783>XP_005247174 Length = 2679 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TNRTLLQR 8 +NRTL+QR Sbjct: 125 SNRTLVQR 132>XP_006718546 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRT LQRL Sbjct: 187 NRTNLQRL 194>NP_055992 Length = 619 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRT LQRL Sbjct: 293 NRTNLQRL 300>NP_055844 Length = 1024 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 TNR LLQ L Sbjct: 239 TNRCLLQDL 247>NP_001139332 Length = 1024 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 TNR LLQ L Sbjct: 239 TNRCLLQDL 247>NP_115766 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRTL Q+L Sbjct: 152 NRTLTQKL 159>NP_001363 Length = 4486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 N+T LQRL Sbjct: 3844 NKTALQRL 3851>XP_006721528 Length = 3869 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 N+T LQRL Sbjct: 3844 NKTALQRL 3851>NP_001139333 Length = 1024 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 TNR LLQ L Sbjct: 239 TNRCLLQDL 247>NP_004653 Length = 798 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 N+T LQRL Sbjct: 156 NKTALQRL 163>NP_000024 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NRTLLQRL 9 NR LQRL Sbjct: 68 NRVFLQRL 75>NP_001265544 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRTLL+ L Sbjct: 439 NRTLLETL 446>NP_115796 Length = 1237 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRTLL+ L Sbjct: 818 NRTLLETL 825>NP_001265542 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRTLL+ L Sbjct: 834 NRTLLETL 841>NP_002578 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRTLL+ L Sbjct: 818 NRTLLETL 825>XP_005268513 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRTLL+ L Sbjct: 439 NRTLLETL 446>XP_005268512 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRTLL+ L Sbjct: 439 NRTLLETL 446>XP_005268511 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRTLL+ L Sbjct: 862 NRTLLETL 869>XP_005268510 Length = 1215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRTLL+ L Sbjct: 796 NRTLLETL 803>XP_005268509 Length = 1281 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRTLLQRL 9 NRTLL+ L Sbjct: 862 NRTLLETL 869>NP_060420 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 T TLLQ+L Sbjct: 560 TEATLLQKL 568>NP_612486 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RTLLQR 8 RTLLQR Sbjct: 677 RTLLQR 682>NP_001073932 Length = 4314 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TNRTLLQRL 9 T+R LLQ+L Sbjct: 2323 TSRHLLQKL 2331>NP_001368 Length = 4307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TNRTLLQRL 9 T+R LLQ+L Sbjct: 2323 TSRHLLQKL 2331>NP_001157281 Length = 1941 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RTLLQR 8 RTLLQR Sbjct: 88 RTLLQR 93>NP_653319 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TNRTLLQR 8 TN +L+QR Sbjct: 658 TNESLIQR 665>NP_001269524 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TNRTLLQ 7 TNRT+L+ Sbjct: 156 TNRTILK 162>NP_067004 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TNRTLLQ 7 TNRT+L+ Sbjct: 290 TNRTILK 296>NP_001269518 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TNRTLLQ 7 TNRT+L+ Sbjct: 159 TNRTILK 165>NP_001269519 Length = 228 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TNRTLLQ 7 TNRT+L+ Sbjct: 183 TNRTILK 189>NP_001230271 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 T TLLQ+L Sbjct: 560 TEATLLQKL 568>NP_001269523 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TNRTLLQ 7 TNRT+L+ Sbjct: 196 TNRTILK 202>NP_001269520 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TNRTLLQ 7 TNRT+L+ Sbjct: 143 TNRTILK 149>NP_542394 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TNRTLLQR 8 T RTLLQ+ Sbjct: 275 TYRTLLQK 282>NP_001074008 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 TNR L Q+L Sbjct: 870 TNRELRQKL 878>NP_277045 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 T+R L QRL Sbjct: 686 TSRLLFQRL 694>NP_001271332 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 +NR LLQ L Sbjct: 13 SNRVLLQAL 21>NP_079030 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 +NR LLQ L Sbjct: 13 SNRVLLQAL 21>XP_006725317 Length = 1745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RTLLQR 8 RTLLQR Sbjct: 88 RTLLQR 93>XP_005257548 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 T TLLQ+L Sbjct: 167 TEATLLQKL 175>XP_005256511 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RTLLQR 8 RTLLQR Sbjct: 88 RTLLQR 93>XP_005254235 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RTLLQR 8 RTLLQR Sbjct: 678 RTLLQR 683>XP_005254233 Length = 1228 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RTLLQR 8 RTLLQR Sbjct: 678 RTLLQR 683>XP_005254234 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RTLLQR 8 RTLLQR Sbjct: 678 RTLLQR 683>XP_006718966 Length = 4300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TNRTLLQRL 9 T+R LLQ+L Sbjct: 2323 TSRHLLQKL 2331>XP_005248658 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 +NR LLQ L Sbjct: 13 SNRVLLQAL 21>XP_006713578 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TNRTLLQR 8 TN +L+QR Sbjct: 658 TNESLIQR 665>XP_006712502 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 TNR L Q+L Sbjct: 357 TNRELRQKL 365>XP_006712501 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TNRTLLQRL 9 TNR L Q+L Sbjct: 849 TNRELRQKL 857>XP_005245443 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TNRTLLQ 7 TNRT+L+ Sbjct: 250 TNRTILK 256Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.136 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 438,174 Number of extensions: 837 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |