Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_114119 17 4312 XP_006713840 17 4312 XP_006713839 17 4312 NP_006022 16 5631 NP_001238774 16 5631 NP_003295 16 5631 XP_005261187 16 5631 XP_005261186 16 5631 XP_005261185 16 5631 XP_005261184 16 5631 XP_005261183 16 5631 XP_005261182 16 5631 XP_005261181 16 5631 XP_005247797 16 5631 XP_005247796 16 5631 XP_005247795 16 5631 NP_005041 16 7355 NP_002415 16 7355 NP_057311 16 7355 NP_055098 16 7355 NP_001269679 16 7355 NP_001269680 16 7355 NP_060935 16 7355 XP_005268003 16 7355 XP_005268006 16 7355 XP_005267999 16 7355 XP_005267997 16 7355 XP_005267998 16 7355 XP_005267996 16 7355 XP_005267995 16 7355 XP_006720286 16 7355 XP_005267993 16 7355 XP_006718904 16 7355 XP_005251567 16 7355 XP_006711439 16 7355 XP_006711438 16 7355 XP_006711437 16 7355 NP_001035364 15 9605 NP_899234 15 9605>NP_114119 Length = 886 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NQREFMSK 9 N+REF+S+ Sbjct: 92 NEREFISR 99>XP_006713840 Length = 817 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NQREFMSK 9 N+REF+S+ Sbjct: 92 NEREFISR 99>XP_006713839 Length = 874 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NQREFMSK 9 N+REF+S+ Sbjct: 92 NEREFISR 99>NP_006022 Length = 3336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NQREFMSK 9 NQR+FM + Sbjct: 1476 NQRQFMDE 1483>NP_001238774 Length = 793 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NQREFMSK 9 NQ+EF+S+ Sbjct: 317 NQKEFVSQ 324>NP_003295 Length = 759 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NQREFMSK 9 NQ+EF+S+ Sbjct: 283 NQKEFVSQ 290>XP_005261187 Length = 2706 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NQREFMSK 9 NQR+FM + Sbjct: 1487 NQRQFMDE 1494>XP_005261186 Length = 3139 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NQREFMSK 9 NQR+FM + Sbjct: 1358 NQRQFMDE 1365>XP_005261185 Length = 3229 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NQREFMSK 9 NQR+FM + Sbjct: 1369 NQRQFMDE 1376>XP_005261184 Length = 3258 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NQREFMSK 9 NQR+FM + Sbjct: 1487 NQRQFMDE 1494>XP_005261183 Length = 3268 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NQREFMSK 9 NQR+FM + Sbjct: 1487 NQRQFMDE 1494>XP_005261182 Length = 3346 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NQREFMSK 9 NQR+FM + Sbjct: 1487 NQRQFMDE 1494>XP_005261181 Length = 3347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NQREFMSK 9 NQR+FM + Sbjct: 1487 NQRQFMDE 1494>XP_005247797 Length = 539 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NQREFMSK 9 NQ+EF+S+ Sbjct: 317 NQKEFVSQ 324>XP_005247796 Length = 661 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NQREFMSK 9 NQ+EF+S+ Sbjct: 185 NQKEFVSQ 192>XP_005247795 Length = 695 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NQREFMSK 9 NQ+EF+S+ Sbjct: 219 NQKEFVSQ 226>NP_005041 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QREFMSK 9 QRE MSK Sbjct: 260 QRELMSK 266>NP_002415 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NQREFM 7 NQR+FM Sbjct: 400 NQRQFM 405>NP_057311 Length = 1405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNQREF 6 TNQR+F Sbjct: 1293 TNQRDF 1298>NP_055098 Length = 1254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNQREF 6 TNQR+F Sbjct: 1142 TNQRDF 1147>NP_001269679 Length = 883 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNQREF 6 TNQR+F Sbjct: 771 TNQRDF 776>NP_001269680 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNQREF 6 TNQR+F Sbjct: 579 TNQRDF 584>NP_060935 Length = 147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NQREFM 7 NQ+EFM Sbjct: 15 NQKEFM 20>XP_005268003 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QREFMSK 9 QRE MSK Sbjct: 101 QRELMSK 107>XP_005268006 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QREFMSK 9 QRE MSK Sbjct: 101 QRELMSK 107>XP_005267999 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QREFMSK 9 QRE MSK Sbjct: 122 QRELMSK 128>XP_005267997 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QREFMSK 9 QRE MSK Sbjct: 122 QRELMSK 128>XP_005267998 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QREFMSK 9 QRE MSK Sbjct: 122 QRELMSK 128>XP_005267996 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QREFMSK 9 QRE MSK Sbjct: 122 QRELMSK 128>XP_005267995 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QREFMSK 9 QRE MSK Sbjct: 260 QRELMSK 266>XP_006720286 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QREFMSK 9 QRE MSK Sbjct: 173 QRELMSK 179>XP_005267993 Length = 528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QREFMSK 9 QRE MSK Sbjct: 260 QRELMSK 266>XP_006718904 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NQREFM 7 NQR+FM Sbjct: 377 NQRQFM 382>XP_005251567 Length = 147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NQREFM 7 NQ+EFM Sbjct: 15 NQKEFM 20>XP_006711439 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNQREF 6 TNQR+F Sbjct: 1098 TNQRDF 1103>XP_006711438 Length = 1217 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNQREF 6 TNQR+F Sbjct: 1105 TNQRDF 1110>XP_006711437 Length = 1247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TNQREF 6 TNQR+F Sbjct: 1135 TNQRDF 1140>NP_001035364 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TNQREFMS 8 TN EFMS Sbjct: 444 TNMVEFMS 451>NP_899234 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NQREFMS 8 N RE+MS Sbjct: 131 NSREYMS 137Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.116 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 450,402 Number of extensions: 657 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |