Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_997639 17 4312 NP_002017 17 4312 NP_997643 17 4312 NP_997647 17 4312 NP_997641 17 4312 NP_006827 17 4312 XP_005246474 17 4312 XP_005246473 17 4312 XP_005246472 17 4312 XP_005246471 17 4312 XP_005246470 17 4312 XP_005246469 17 4312 XP_005246468 17 4312 XP_005246467 17 4312 XP_005246466 17 4312 XP_005246465 17 4312 XP_005246464 17 4312 XP_005246463 17 4312 XP_005246462 17 4312 XP_005246461 17 4312 XP_005246460 17 4312 XP_005246459 17 4312 XP_005246458 17 4312 XP_005246457 17 4312 XP_005246456 17 4312 XP_005246455 17 4312 XP_005246454 17 4312 NP_006874 16 5631 NP_000442 16 5631 NP_078966 16 7355 NP_001184060 16 7355 NP_005520 16 7355 NP_115287 16 7355 NP_002472 16 7355 NP_115286 16 7355 XP_005245262 16 7355 XP_005245259 16 7355 XP_006711402 16 7355 XP_005245258 16 7355 XP_005245257 16 7355 XP_005245256 16 7355 XP_006710661 16 7355 XP_005245920 16 7355 XP_006710660 16 7355 XP_006710659 16 7355 XP_006710658 16 7355 XP_006710657 16 7355 NP_001073964 15 9605 NP_001159635 15 9605 NP_001159632 15 9605 NP_001159634 15 9605 NP_001159633 15 9605 NP_001135760 15 9605 NP_006058 15 9605 XP_006716111 15 9605 XP_006716110 15 9605 XP_005250542 15 9605 XP_006716109 15 9605 XP_006715861 15 9605 XP_006715860 15 9605 NP_060120 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 TMTSR AEG Sbjct: 1025 TMTSRGAEG 1033>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 TMTSR AEG Sbjct: 1025 TMTSRGAEG 1033>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 TMTSR AEG Sbjct: 1025 TMTSRGAEG 1033>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 TMTSR AEG Sbjct: 1025 TMTSRGAEG 1033>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 TMTSR AEG Sbjct: 1025 TMTSRGAEG 1033>NP_997639 Length = 2176 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1708 TLTSRPAQG 1716>NP_002017 Length = 2355 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1798 TLTSRPAQG 1806>NP_997643 Length = 2330 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1798 TLTSRPAQG 1806>NP_997647 Length = 2477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1889 TLTSRPAQG 1897>NP_997641 Length = 2296 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1708 TLTSRPAQG 1716>NP_006827 Length = 2671 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSRV +G Sbjct: 958 TITSRVGKG 966>XP_005246474 Length = 2240 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1708 TLTSRPAQG 1716>XP_005246473 Length = 2246 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1708 TLTSRPAQG 1716>XP_005246472 Length = 2265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1708 TLTSRPAQG 1716>XP_005246471 Length = 2266 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1798 TLTSRPAQG 1806>XP_005246470 Length = 2267 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1799 TLTSRPAQG 1807>XP_005246469 Length = 2271 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1708 TLTSRPAQG 1716>XP_005246468 Length = 2273 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1799 TLTSRPAQG 1807>XP_005246467 Length = 2337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1799 TLTSRPAQG 1807>XP_005246466 Length = 2361 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1798 TLTSRPAQG 1806>XP_005246465 Length = 2362 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1799 TLTSRPAQG 1807>XP_005246464 Length = 2363 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1889 TLTSRPAQG 1897>XP_005246463 Length = 2386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1798 TLTSRPAQG 1806>XP_005246462 Length = 2387 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1799 TLTSRPAQG 1807>XP_005246461 Length = 2392 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1798 TLTSRPAQG 1806>XP_005246460 Length = 2393 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1799 TLTSRPAQG 1807>XP_005246459 Length = 2421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1889 TLTSRPAQG 1897>XP_005246458 Length = 2427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1889 TLTSRPAQG 1897>XP_005246457 Length = 2446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1889 TLTSRPAQG 1897>XP_005246456 Length = 2452 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1889 TLTSRPAQG 1897>XP_005246455 Length = 2458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1889 TLTSRPAQG 1897>XP_005246454 Length = 2483 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMTSRVAEG 9 T+TSR A+G Sbjct: 1889 TLTSRPAQG 1897>NP_006874 Length = 225 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSRVAEG 9 T+RVAEG Sbjct: 87 TARVAEG 93>NP_000442 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSRVAEG 9 T+RVAEG Sbjct: 87 TARVAEG 93>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 6488 TLTSRVPE 6495>NP_001184060 Length = 186 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 73 TLTSRVEE 80>NP_005520 Length = 4391 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSRVAEG 9 +SRVAEG Sbjct: 2835 SSRVAEG 2841>NP_115287 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 95 TLTSRVEE 102>NP_002472 Length = 982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 869 TLTSRVEE 876>NP_115286 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 95 TLTSRVEE 102>XP_005245262 Length = 891 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 762 TLTSRVEE 769>XP_005245259 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 869 TLTSRVEE 876>XP_006711402 Length = 1042 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 930 TLTSRVEE 937>XP_005245258 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 930 TLTSRVEE 937>XP_005245257 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 930 TLTSRVEE 937>XP_005245256 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMTSRVAE 8 T+TSRV E Sbjct: 930 TLTSRVEE 937>XP_006710661 Length = 4057 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSRVAEG 9 +SRVAEG Sbjct: 3018 SSRVAEG 3024>XP_005245920 Length = 4392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSRVAEG 9 +SRVAEG Sbjct: 2836 SSRVAEG 2842>XP_006710660 Length = 4397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSRVAEG 9 +SRVAEG Sbjct: 2835 SSRVAEG 2841>XP_006710659 Length = 4556 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSRVAEG 9 +SRVAEG Sbjct: 2994 SSRVAEG 3000>XP_006710658 Length = 4563 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSRVAEG 9 +SRVAEG Sbjct: 3001 SSRVAEG 3007>XP_006710657 Length = 4579 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSRVAEG 9 +SRVAEG Sbjct: 3017 SSRVAEG 3023>NP_001073964 Length = 2968 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMTSRVAEG 9 T TSR A+G Sbjct: 2021 TKTSRCAKG 2029>NP_001159635 Length = 1090 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MTSRVAEG 9 MTS AEG Sbjct: 1079 MTSTTAEG 1086>NP_001159632 Length = 1374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MTSRVAEG 9 MTS AEG Sbjct: 1363 MTSTTAEG 1370>NP_001159634 Length = 1253 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MTSRVAEG 9 MTS AEG Sbjct: 1242 MTSTTAEG 1249>NP_001159633 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MTSRVAEG 9 MTS AEG Sbjct: 1285 MTSTTAEG 1292>NP_001135760 Length = 126 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MTSRVAEG 9 + SR+AEG Sbjct: 111 VASRIAEG 118>NP_006058 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MTSRVAEG 9 + SR+AEG Sbjct: 111 VASRIAEG 118>XP_006716111 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MTSRVAEG 9 MTS AEG Sbjct: 690 MTSTTAEG 697>XP_006716110 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MTSRVAEG 9 MTS AEG Sbjct: 1130 MTSTTAEG 1137>XP_005250542 Length = 1357 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MTSRVAEG 9 MTS AEG Sbjct: 1346 MTSTTAEG 1353>XP_006716109 Length = 1365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MTSRVAEG 9 MTS AEG Sbjct: 1354 MTSTTAEG 1361>XP_006715861 Length = 2189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMTSRVAEG 9 T TSR A+G Sbjct: 2021 TKTSRCAKG 2029>XP_006715860 Length = 2968 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMTSRVAEG 9 T TSR A+G Sbjct: 2021 TKTSRCAKG 2029>NP_060120 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MTSRVAEG 9 MTS AEG Sbjct: 1087 MTSTTAEG 1094Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.112 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 278,856 Number of extensions: 398 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |