Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_001623 17 3301 XP_005246496 17 3301 NP_112603 17 3301 NP_001245258 17 4312 NP_001245260 17 4312 NP_001245259 17 4312 NP_818932 17 4312 NP_036288 17 4312 XP_005260382 17 4312 XP_005260381 17 4312 XP_006723804 17 4312 XP_005260380 17 4312 XP_006723803 17 4312 XP_005260379 17 4312 XP_005260378 17 4312 XP_005260377 17 4312 XP_006723802 17 4312 XP_005260376 17 4312 XP_006723801 17 4312 XP_006723800 17 4312 XP_006723799 17 4312 XP_006723798 17 4312 NP_001026850 16 5631 NP_004341 16 5631 NP_078966 16 5631 NP_001230925 16 5631 NP_001185761 16 5631 NP_001027 16 5631 NP_001185763 16 5631 NP_055459 16 5631 NP_001010854 16 5631 XP_006726410 16 5631 XP_005267424 16 5631 XP_006720122 16 5631 XP_006720121 16 5631 XP_006711719 16 5631 XP_006711718 16 5631 XP_006711717 16 5631 XP_006711716 16 5631 XP_006711715 16 5631 XP_006711714 16 5631 XP_006711713 16 5631 XP_006711712 16 5631 XP_006711711 16 5631 XP_006711710 16 5631 XP_006711709 16 5631 XP_005277503 16 5631 XP_005273038 16 5631 XP_006711708 16 5631 XP_005277500 16 5631 XP_006711707 16 5631 XP_005277499 16 5631 XP_006711706 16 5631 XP_006711705 16 5631 XP_006711164 16 5631 XP_005246081 16 5631 XP_006710143 16 5631 XP_006710142 16 5631 XP_006710141 16 5631 NP_543146 16 5631 NP_620063 16 7355 NP_001092805 15 9605 NP_055574 15 9605 NP_851320 15 9605 XP_006716479 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMSLSTTDH 9 TMS STTDH Sbjct: 2130 TMSPSTTDH 2138>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMSLSTTDH 9 TMS STTDH Sbjct: 1925 TMSPSTTDH 1933>NP_001623 Length = 535 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+SL T DH Sbjct: 372 TLSLVTADH 380>XP_005246496 Length = 550 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+SL T DH Sbjct: 387 TLSLVTADH 395>NP_112603 Length = 532 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+SL T DH Sbjct: 369 TLSLVTADH 377>NP_001245258 Length = 880 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 801 TLSTSTTTH 809>NP_001245260 Length = 779 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 700 TLSTSTTTH 708>NP_001245259 Length = 701 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 622 TLSTSTTTH 630>NP_818932 Length = 779 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 700 TLSTSTTTH 708>NP_036288 Length = 881 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 802 TLSTSTTTH 810>XP_005260382 Length = 732 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 653 TLSTSTTTH 661>XP_005260381 Length = 744 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 665 TLSTSTTTH 673>XP_006723804 Length = 819 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 740 TLSTSTTTH 748>XP_005260380 Length = 841 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 762 TLSTSTTTH 770>XP_006723803 Length = 853 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 774 TLSTSTTTH 782>XP_005260379 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 788 TLSTSTTTH 796>XP_005260378 Length = 868 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 789 TLSTSTTTH 797>XP_005260377 Length = 869 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 790 TLSTSTTTH 798>XP_006723802 Length = 880 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 801 TLSTSTTTH 809>XP_005260376 Length = 880 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 801 TLSTSTTTH 809>XP_006723801 Length = 881 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 802 TLSTSTTTH 810>XP_006723800 Length = 881 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 802 TLSTSTTTH 810>XP_006723799 Length = 881 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 802 TLSTSTTTH 810>XP_006723798 Length = 916 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T+S STT H Sbjct: 837 TLSTSTTTH 845>NP_001026850 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLSTTDH 9 SLSTT H Sbjct: 232 SLSTTSH 238>NP_004341 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLSTTDH 9 SLSTT H Sbjct: 218 SLSTTSH 224>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLSTTDH 9 SLSTT H Sbjct: 7745 SLSTTSH 7751>NP_001230925 Length = 4865 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TMSLSTTD 8 T+SLSTT+ Sbjct: 2401 TVSLSTTE 2408>NP_001185761 Length = 2240 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1501 TSKLSTKDH 1509>NP_001027 Length = 4870 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TMSLSTTD 8 T+SLSTT+ Sbjct: 2401 TVSLSTTE 2408>NP_001185763 Length = 2362 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1545 TSKLSTKDH 1553>NP_055459 Length = 2346 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1545 TSKLSTKDH 1553>NP_001010854 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLSTTDH 9 SLS TDH Sbjct: 509 SLSPTDH 515>XP_006726410 Length = 2087 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1348 TSKLSTKDH 1356>XP_005267424 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLSTTDH 9 SLS TDH Sbjct: 251 SLSPTDH 257>XP_006720122 Length = 820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLSTTDH 9 SLS TDH Sbjct: 415 SLSPTDH 421>XP_006720121 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLSTTDH 9 SLS TDH Sbjct: 517 SLSPTDH 523>XP_006711719 Length = 2302 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1501 TSKLSTKDH 1509>XP_006711718 Length = 1436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 552 TSKLSTKDH 560>XP_006711717 Length = 2385 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1501 TSKLSTKDH 1509>XP_006711716 Length = 2411 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1610 TSKLSTKDH 1618>XP_006711715 Length = 2428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1544 TSKLSTKDH 1552>XP_006711714 Length = 2429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1545 TSKLSTKDH 1553>XP_006711713 Length = 2432 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1548 TSKLSTKDH 1556>XP_006711712 Length = 2473 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1708 TSKLSTKDH 1716>XP_006711711 Length = 2482 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1598 TSKLSTKDH 1606>XP_006711710 Length = 2494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1610 TSKLSTKDH 1618>XP_006711709 Length = 2495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1611 TSKLSTKDH 1619>XP_005277503 Length = 2498 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1708 TSKLSTKDH 1716>XP_005273038 Length = 2509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1708 TSKLSTKDH 1716>XP_006711708 Length = 2512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1708 TSKLSTKDH 1716>XP_005277500 Length = 2525 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1708 TSKLSTKDH 1716>XP_006711707 Length = 2553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1708 TSKLSTKDH 1716>XP_005277499 Length = 2561 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1708 TSKLSTKDH 1716>XP_006711706 Length = 2591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1707 TSKLSTKDH 1715>XP_006711705 Length = 2592 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1708 TSKLSTKDH 1716>XP_006711164 Length = 2087 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 1348 TSKLSTKDH 1356>XP_005246081 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLSTTDH 9 SLSTT H Sbjct: 232 SLSTTSH 238>XP_006710143 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 387 TSKLSTKDH 395>XP_006710142 Length = 671 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 496 TSKLSTKDH 504>XP_006710141 Length = 672 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSLSTTDH 9 T LST DH Sbjct: 497 TSKLSTKDH 505>NP_543146 Length = 1393 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMSLSTTDH 9 T LST+DH Sbjct: 38 TGELSTSDH 46>NP_620063 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLSTTDH 9 SLSTT H Sbjct: 56 SLSTTHH 62>NP_001092805 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MSLSTTD 8 MSLST D Sbjct: 308 MSLSTAD 314>NP_055574 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MSLSTTD 8 MSLST D Sbjct: 308 MSLSTAD 314>NP_851320 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TMSLSTTDH 9 TM+++ T+H Sbjct: 101 TMTMNQTEH 109>XP_006716479 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MSLSTTD 8 MSLST D Sbjct: 308 MSLSTAD 314Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.105 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 353,267 Number of extensions: 446 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |