Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 299 NP_000170 20 299 NP_001268422 20 299 NP_001268423 20 299 XP_005264328 20 299 NP_001269470 18 1135 NP_003167 18 1135 NP_001269471 18 1135 XP_005271213 18 1135 XP_005271212 18 1135 XP_005271211 18 1135 XP_006710922 18 1135 NP_065385 17 3301 NP_055568 16 7355 NP_055959 16 7355 NP_689450 16 7355 XP_006726562 16 7355 XP_005276411 16 7355 XP_005276410 16 7355 XP_006726561 16 7355 XP_005276409 16 7355 XP_005276408 16 7355 XP_005276407 16 7355 XP_006726559 16 7355 XP_005276406 16 7355 XP_006726558 16 7355 XP_006724974 16 7355 XP_005257319 16 7355 XP_005257318 16 7355 XP_005257317 16 7355 XP_005255915 16 7355 XP_005271906 16 7355 XP_006718144 16 7355 XP_005271905 16 7355 XP_005271904 16 7355 XP_005271903 16 7355 XP_006716964 16 7355 XP_006716963 16 7355 XP_006716962 16 7355 XP_006716961 16 7355 NP_037455 16 7355 NP_037473 15 9605 NP_653081 15 9605 NP_055650 15 9605 NP_002431 15 9605 NP_001138590 15 9605 XP_005257785 15 9605 XP_006718300 15 9605 XP_006718299 15 9605 XP_005252990 15 9605 NP_004305 15 9605 NP_006811 15 9605 NP_115510 15 9605>NP_001268421 Length = 1230 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MSGESTFF 9 MSGESTFF Sbjct: 1054 MSGESTFF 1061>NP_000170 Length = 1360 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MSGESTFF 9 MSGESTFF Sbjct: 1184 MSGESTFF 1191>NP_001268422 Length = 1058 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MSGESTFF 9 MSGESTFF Sbjct: 882 MSGESTFF 889>NP_001268423 Length = 1058 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MSGESTFF 9 MSGESTFF Sbjct: 882 MSGESTFF 889>XP_005264328 Length = 1261 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MSGESTFF 9 MSGESTFF Sbjct: 1085 MSGESTFF 1092>NP_001269470 Length = 976 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMSGESTFF 9 T+ G+STFF Sbjct: 27 TLGGDSTFF 35>NP_003167 Length = 976 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMSGESTFF 9 T+ G+STFF Sbjct: 27 TLGGDSTFF 35>NP_001269471 Length = 951 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMSGESTFF 9 T+ G+STFF Sbjct: 27 TLGGDSTFF 35>XP_005271213 Length = 921 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMSGESTFF 9 T+ G+STFF Sbjct: 27 TLGGDSTFF 35>XP_005271212 Length = 958 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMSGESTFF 9 T+ G+STFF Sbjct: 27 TLGGDSTFF 35>XP_005271211 Length = 973 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMSGESTFF 9 T+ G+STFF Sbjct: 27 TLGGDSTFF 35>XP_006710922 Length = 976 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMSGESTFF 9 T+ G+STFF Sbjct: 27 TLGGDSTFF 35>NP_065385 Length = 731 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TMSGESTFF 9 TM GE T F Sbjct: 55 TMDGEGTLF 63>NP_055568 Length = 1282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 843 GESTYF 848>NP_055959 Length = 949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSGESTF 8 +SG+STF Sbjct: 864 LSGQSTF 870>NP_689450 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MSGESTFF 9 + G+STFF Sbjct: 82 LPGKSTFF 89>XP_006726562 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_005276411 Length = 150 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_005276410 Length = 155 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_006726561 Length = 156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_005276409 Length = 172 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_005276408 Length = 178 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_005276407 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_006726559 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_005276406 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_006726558 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_006724974 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 76 GESTYF 81>XP_005257319 Length = 262 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MSGESTFF 9 + G+STFF Sbjct: 74 LPGKSTFF 81>XP_005257318 Length = 262 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MSGESTFF 9 + G+STFF Sbjct: 74 LPGKSTFF 81>XP_005257317 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MSGESTFF 9 + G+STFF Sbjct: 82 LPGKSTFF 89>XP_005255915 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSGESTF 8 +SG+STF Sbjct: 1001 LSGQSTF 1007>XP_005271906 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 843 GESTYF 848>XP_006718144 Length = 886 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 843 GESTYF 848>XP_005271905 Length = 1219 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 843 GESTYF 848>XP_005271904 Length = 1219 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 780 GESTYF 785>XP_005271903 Length = 1282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 843 GESTYF 848>XP_006716964 Length = 155 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_006716963 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_006716962 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>XP_006716961 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 GEST+F Sbjct: 9 GESTYF 14>NP_037455 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MSGESTFF 9 + G+STFF Sbjct: 82 LPGKSTFF 89>NP_037473 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GESTFF 9 G+STFF Sbjct: 34 GKSTFF 39>NP_653081 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MSGESTFF 9 M+GE FF Sbjct: 1 MNGEEEFF 8>NP_055650 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MSGESTFF 9 M+GE FF Sbjct: 1 MNGEEEFF 8>NP_002431 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSGESTF 8 MSG+ST+ Sbjct: 683 MSGKSTY 689>NP_001138590 Length = 1211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TMSGESTF 8 T+ G+STF Sbjct: 1056 TVDGKSTF 1063>XP_005257785 Length = 1887 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMSGEST 7 T+SG+ST Sbjct: 258 TLSGDST 264>XP_006718300 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 GESTFF 9 GE TFF Sbjct: 174 GEDTFF 179>XP_006718299 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 GESTFF 9 GE TFF Sbjct: 214 GEDTFF 219>XP_005252990 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 GESTFF 9 GE TFF Sbjct: 214 GEDTFF 219>NP_004305 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 GESTFF 9 GE TFF Sbjct: 214 GEDTFF 219>NP_006811 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SGESTFF 9 SG+S+FF Sbjct: 208 SGKSSFF 214>NP_115510 Length = 1663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMSGEST 7 T+SG+ST Sbjct: 92 TLSGDST 98Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.125 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 639,222 Number of extensions: 1041 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |