Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 21 229 NP_005517 17 2528 XP_005272373 17 2528 XP_005272372 17 2528 XP_006713927 17 2528 NP_660334 17 2528 NP_149017 17 4312 NP_001239607 17 4312 NP_689914 17 4312 NP_001269042 17 4312 NP_001269041 17 4312 NP_001265536 17 4312 NP_001243779 17 4312 NP_596869 17 4312 NP_001265537 17 4312 NP_001265535 17 4312 NP_003926 17 4312 NP_001186 17 4312 XP_006724415 17 4312 XP_005261871 17 4312 XP_005261870 17 4312 XP_006724414 17 4312 XP_005261868 17 4312 XP_006724413 17 4312 XP_006724412 17 4312 XP_006720688 17 4312 XP_006720687 17 4312 XP_006720686 17 4312 XP_006712787 17 4312 XP_006712786 17 4312 NP_001155177 17 4312 NP_001254479 17 4312 NP_620687 16 5631 NP_005667 16 7355 NP_690595 16 7355 NP_001859 16 7355 NP_001191396 16 7355 NP_001191395 16 7355 NP_001191397 16 7355 NP_060149 16 7355 NP_001092902 16 7355 XP_005272736 16 7355 XP_005272735 16 7355 XP_005272734 16 7355 XP_005257534 16 7355 XP_005257533 16 7355 XP_005257532 16 7355 XP_005257531 16 7355 XP_005257530 16 7355 XP_005257529 16 7355 NP_079023 15 9605 NP_570720 15 9605 NP_001276041 15 9605 NP_258416 15 9605 NP_203134 15 9605 NP_203133 15 9605 NP_005705 15 9605 NP_702907 15 9605>NP_004295 Length = 1620 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TMMQSHGVS 9 TMM+SHGVS Sbjct: 750 TMMRSHGVS 758>NP_005517 Length = 529 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMMQSHGVS 9 TM+ SHG S Sbjct: 400 TMLSSHGFS 408>XP_005272373 Length = 517 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMMQSHGVS 9 TM+ SHG S Sbjct: 428 TMLSSHGFS 436>XP_005272372 Length = 557 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMMQSHGVS 9 TM+ SHG S Sbjct: 428 TMLSSHGFS 436>XP_006713927 Length = 765 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMMQSHGVS 9 +M+Q HGVS Sbjct: 657 SMIQPHGVS 665>NP_660334 Length = 765 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMMQSHGVS 9 +M+Q HGVS Sbjct: 657 SMIQPHGVS 665>NP_149017 Length = 519 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMMQSHG 7 +MMQ+HG Sbjct: 244 SMMQTHG 250>NP_001239607 Length = 347 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMMQSHG 7 +MMQ+HG Sbjct: 72 SMMQTHG 78>NP_689914 Length = 5058 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TMMQSHGVS 9 T +Q HGV+ Sbjct: 244 TFLQQHGVA 252>NP_001269042 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TMMQSHGV 8 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>NP_001269041 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TMMQSHGV 8 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>NP_001265536 Length = 554 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QSHGVS 9 QSHGVS Sbjct: 223 QSHGVS 228>NP_001243779 Length = 34350 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TMMQSHGVS 9 T +Q HG+S Sbjct: 5830 TAIQKHGIS 5838>NP_596869 Length = 33423 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TMMQSHGVS 9 T +Q HG+S Sbjct: 4903 TAIQKHGIS 4911>NP_001265537 Length = 526 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QSHGVS 9 QSHGVS Sbjct: 195 QSHGVS 200>NP_001265535 Length = 526 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QSHGVS 9 QSHGVS Sbjct: 195 QSHGVS 200>NP_003926 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TMMQSHGV 8 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>NP_001186 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QSHGVS 9 QSHGVS Sbjct: 334 QSHGVS 339>XP_006724415 Length = 707 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TMMQSHGV 8 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_005261871 Length = 708 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TMMQSHGV 8 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_005261870 Length = 726 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TMMQSHGV 8 T+M+ HG+ Sbjct: 365 TLMEKHGI 372>XP_006724414 Length = 730 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TMMQSHGV 8 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_005261868 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TMMQSHGV 8 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_006724413 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TMMQSHGV 8 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_006724412 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TMMQSHGV 8 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_006720688 Length = 496 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMMQSHG 7 +MMQ+HG Sbjct: 221 SMMQTHG 227>XP_006720687 Length = 504 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMMQSHG 7 +MMQ+HG Sbjct: 229 SMMQTHG 235>XP_006720686 Length = 507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMMQSHG 7 +MMQ+HG Sbjct: 232 SMMQTHG 238>XP_006712787 Length = 33978 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TMMQSHGVS 9 T +Q HG+S Sbjct: 5831 TAIQKHGIS 5839>XP_006712786 Length = 35484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TMMQSHGVS 9 T +Q HG+S Sbjct: 5831 TAIQKHGIS 5839>NP_001155177 Length = 540 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QSHGVS 9 QSHGVS Sbjct: 209 QSHGVS 214>NP_001254479 Length = 35991 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TMMQSHGVS 9 T +Q HG+S Sbjct: 6147 TAIQKHGIS 6155>NP_620687 Length = 1224 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MMQSHG 7 MMQ+HG Sbjct: 302 MMQNHG 307>NP_005667 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MQSHGV 8 +QSHGV Sbjct: 149 LQSHGV 154>NP_690595 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MQSHGV 8 +QSHGV Sbjct: 72 LQSHGV 77>NP_001859 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MQSHGVS 9 ++SHG+S Sbjct: 79 LESHGIS 85>NP_001191396 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MQSHGV 8 +QSHGV Sbjct: 149 LQSHGV 154>NP_001191395 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MQSHGV 8 +QSHGV Sbjct: 72 LQSHGV 77>NP_001191397 Length = 995 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MQSHGV 8 +QSHGV Sbjct: 214 LQSHGV 219>NP_060149 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMMQSHGVS 9 +++QSHG S Sbjct: 748 SVLQSHGPS 756>NP_001092902 Length = 928 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMMQSHGVS 9 +++QSHG S Sbjct: 763 SVLQSHGPS 771>XP_005272736 Length = 917 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MQSHGV 8 +QSHGV Sbjct: 137 LQSHGV 142>XP_005272735 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MQSHGV 8 +QSHGV Sbjct: 137 LQSHGV 142>XP_005272734 Length = 994 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MQSHGV 8 +QSHGV Sbjct: 214 LQSHGV 219>XP_005257534 Length = 831 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMMQSHGVS 9 +++QSHG S Sbjct: 763 SVLQSHGPS 771>XP_005257533 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMMQSHGVS 9 +++QSHG S Sbjct: 763 SVLQSHGPS 771>XP_005257532 Length = 928 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMMQSHGVS 9 +++QSHG S Sbjct: 748 SVLQSHGPS 756>XP_005257531 Length = 935 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMMQSHGVS 9 +++QSHG S Sbjct: 748 SVLQSHGPS 756>XP_005257530 Length = 943 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMMQSHGVS 9 +++QSHG S Sbjct: 763 SVLQSHGPS 771>XP_005257529 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMMQSHGVS 9 +++QSHG S Sbjct: 763 SVLQSHGPS 771>NP_079023 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TMMQSHG 7 +++QSHG Sbjct: 290 SLLQSHG 296>NP_570720 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 MQSHG 7 MQSHG Sbjct: 52 MQSHG 56>NP_001276041 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 MQSHG 7 MQSHG Sbjct: 70 MQSHG 74>NP_258416 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QSHGVS 9 Q+HGVS Sbjct: 74 QAHGVS 79>NP_203134 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QSHGVS 9 Q+HGVS Sbjct: 74 QAHGVS 79>NP_203133 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QSHGVS 9 Q+HGVS Sbjct: 74 QAHGVS 79>NP_005705 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QSHGVS 9 Q+HGVS Sbjct: 74 QAHGVS 79>NP_702907 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 MQSHG 7 MQSHG Sbjct: 70 MQSHG 74Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.112 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 510,172 Number of extensions: 579 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |