Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001121619 20 390 NP_000258 20 390 NP_001035957 20 390 XP_006721991 20 390 XP_006721990 20 390 XP_006721989 20 390 XP_005258041 20 390 XP_006721988 20 390 XP_006721987 20 390 XP_006721986 20 390 XP_005258040 20 390 XP_006721985 20 390 NP_004861 17 3301 XP_006721662 17 3301 XP_006721661 17 3301 XP_006721660 17 3301 NP_872303 17 4312 NP_000128 16 5631 XP_005263029 16 5631 NP_443728 16 7355 NP_001124435 16 7355 NP_056072 16 7355 XP_006713550 16 7355 XP_006711606 16 7355 XP_006711605 16 7355 NP_005183 15 9605 NP_001124323 15 9605 NP_001276089 15 9605 NP_005922 15 9605 NP_000238 15 9605 NP_073580 15 9605 NP_001276081 15 9605 NP_001161212 15 9605 NP_001170990 15 9605 NP_001276082 15 9605 NP_004514 15 9605 XP_006726158 15 9605 XP_006726065 15 9605 XP_005267315 15 9605 XP_005264439 15 9605 XP_005264438 15 9605 XP_005273286 15 9605 XP_005273285 15 9605 NP_060197 15 9605>NP_001121619 Length = 593 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>NP_000258 Length = 2818 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>NP_001035957 Length = 2839 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>XP_006721991 Length = 1632 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>XP_006721990 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>XP_006721989 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>XP_005258041 Length = 2836 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>XP_006721988 Length = 2846 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>XP_006721987 Length = 2849 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>XP_006721986 Length = 2854 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 146 TRLQELTVC 154>XP_005258040 Length = 2857 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>XP_006721985 Length = 2867 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TMLQELTVC 9 T LQELTVC Sbjct: 159 TRLQELTVC 167>NP_004861 Length = 247 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 MLQ +T+C Sbjct: 110 MLQTITIC 117>XP_006721662 Length = 192 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 MLQ +T+C Sbjct: 110 MLQTITIC 117>XP_006721661 Length = 259 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 MLQ +T+C Sbjct: 110 MLQTITIC 117>XP_006721660 Length = 260 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 MLQ +T+C Sbjct: 110 MLQTITIC 117>NP_872303 Length = 431 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLQELTVC 9 +L+ELT+C Sbjct: 198 ILEELTLC 205>NP_000128 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TMLQELT 7 TMLQ+LT Sbjct: 325 TMLQQLT 331>XP_005263029 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMLQELTVC 9 T LQ+L VC Sbjct: 9 TTLQDLGVC 17>NP_443728 Length = 2145 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 MLQ +T+C Sbjct: 367 MLQTVTLC 374>NP_001124435 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MLQELTVC 9 MLQE VC Sbjct: 51 MLQESQVC 58>NP_056072 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MLQELTVC 9 MLQE VC Sbjct: 51 MLQESQVC 58>XP_006713550 Length = 2180 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 MLQ +T+C Sbjct: 367 MLQTVTLC 374>XP_006711606 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 +L+EL VC Sbjct: 22 VLEELAVC 29>XP_006711605 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 +L+EL VC Sbjct: 22 VLEELAVC 29>NP_005183 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 +++ELT C Sbjct: 122 IMEELTTC 129>NP_001124323 Length = 172 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 +++ELT C Sbjct: 82 IMEELTTC 89>NP_001276089 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQELTVC 9 LQE+ VC Sbjct: 81 LQEIRVC 87>NP_005922 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQELTVC 9 LQE+ VC Sbjct: 113 LQEIRVC 119>NP_000238 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQELTVC 9 LQE+ VC Sbjct: 113 LQEIRVC 119>NP_073580 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 QELTVC 9 +ELT+C Sbjct: 174 EELTIC 179>NP_001276081 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQELTVC 9 LQE+ VC Sbjct: 16 LQEIRVC 22>NP_001161212 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 QELTVC 9 +ELT+C Sbjct: 233 EELTIC 238>NP_001170990 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQELTVC 9 LQE+ VC Sbjct: 113 LQEIRVC 119>NP_001276082 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQELTVC 9 LQE+ VC Sbjct: 16 LQEIRVC 22>NP_004514 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQELTVC 9 LQE T+C Sbjct: 689 LQENTIC 695>XP_006726158 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQELTVC 9 LQE+ VC Sbjct: 81 LQEIRVC 87>XP_006726065 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQELTVC 9 LQE+ VC Sbjct: 81 LQEIRVC 87>XP_005267315 Length = 146 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 MLQELTVC 9 +++ELT C Sbjct: 122 IMEELTTC 129>XP_005264439 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TMLQEL 6 TMLQEL Sbjct: 203 TMLQEL 208>XP_005264438 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TMLQEL 6 TMLQEL Sbjct: 203 TMLQEL 208>XP_005273286 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 QELTVC 9 +ELT+C Sbjct: 63 EELTIC 68>XP_005273285 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 QELTVC 9 +ELT+C Sbjct: 233 EELTIC 238>NP_060197 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TMLQEL 6 TMLQEL Sbjct: 203 TMLQEL 208Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.131 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 578,868 Number of extensions: 963 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |