Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 299 XP_005262424 20 299 NP_001010877 17 3301 NP_001180557 17 3301 XP_006726147 17 3301 XP_006726146 17 3301 XP_005275587 17 3301 XP_006726145 17 3301 XP_006726057 17 3301 XP_006726056 17 3301 XP_005275427 17 3301 XP_006726055 17 3301 XP_006725876 17 3301 XP_006725875 17 3301 XP_005275151 17 3301 XP_006725874 17 3301 XP_006725758 17 3301 XP_006725757 17 3301 XP_005274997 17 3301 XP_006725756 17 3301 XP_006725544 17 3301 XP_006725543 17 3301 XP_005272851 17 3301 XP_006725542 17 3301 XP_006725100 17 3301 XP_006725099 17 3301 XP_006725098 17 3301 XP_006725097 17 3301 XP_006723085 17 3301 XP_006715132 17 3301 XP_006715131 17 3301 XP_005249076 17 3301 XP_006715130 17 3301 NP_078966 17 4312 NP_694950 16 7355 NP_001121775 16 7355 NP_060217 16 7355 NP_065741 16 7355 XP_006719830 16 7355 XP_006719829 16 7355 XP_005266318 16 7355 NP_000284 15 9605 NP_001027005 15 9605 NP_060364 15 9605 NP_870992 15 9605 NP_001007073 15 9605 XP_005256041 15 9605 XP_005256040 15 9605 XP_006721057 15 9605 XP_005254992 15 9605>NP_722576 Length = 3080 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TMLPRESAM 9 TMLPRES+M Sbjct: 1496 TMLPRESSM 1504>XP_005262424 Length = 2875 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TMLPRESAM 9 TMLPRES+M Sbjct: 1291 TMLPRESSM 1299>NP_001010877 Length = 666 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 24 TQLPQESAL 32>NP_001180557 Length = 118 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TMLPRES 7 T+LPRES Sbjct: 20 TLLPRES 26>XP_006726147 Length = 674 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 24 TQLPQESAL 32>XP_006726146 Length = 691 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_005275587 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006726145 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006726057 Length = 674 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 24 TQLPQESAL 32>XP_006726056 Length = 691 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_005275427 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006726055 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006725876 Length = 674 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 24 TQLPQESAL 32>XP_006725875 Length = 691 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_005275151 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006725874 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006725758 Length = 674 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 24 TQLPQESAL 32>XP_006725757 Length = 691 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_005274997 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006725756 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006725544 Length = 674 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 24 TQLPQESAL 32>XP_006725543 Length = 691 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_005272851 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006725542 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006725100 Length = 674 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 24 TQLPQESAL 32>XP_006725099 Length = 691 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006725098 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006725097 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006723085 Length = 155 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TMLPRES 7 T+LPRES Sbjct: 57 TLLPRES 63>XP_006715132 Length = 674 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 24 TQLPQESAL 32>XP_006715131 Length = 691 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_005249076 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>XP_006715130 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMLPRESAM 9 T LP+ESA+ Sbjct: 49 TQLPQESAL 57>NP_078966 Length = 14507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMLPRESAM 9 T +PR SAM Sbjct: 6345 TSMPRSSAM 6353>NP_694950 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LPRESA 8 LPRESA Sbjct: 345 LPRESA 350>NP_001121775 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LPRESA 8 LPRESA Sbjct: 345 LPRESA 350>NP_060217 Length = 2542 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMLPRESA 8 T+LP ESA Sbjct: 1919 TVLPSESA 1926>NP_065741 Length = 2617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TMLPRESA 8 T+LP ESA Sbjct: 1919 TVLPSESA 1926>XP_006719830 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LPRESA 8 LPRESA Sbjct: 345 LPRESA 350>XP_006719829 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LPRESA 8 LPRESA Sbjct: 345 LPRESA 350>XP_005266318 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LPRESA 8 LPRESA Sbjct: 345 LPRESA 350>NP_000284 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMLPRES 7 ++LPRES Sbjct: 281 SLLPRES 287>NP_001027005 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMLPRES 7 ++LPRES Sbjct: 274 SLLPRES 280>NP_060364 Length = 150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMLPRE 6 TMLP+E Sbjct: 100 TMLPKE 105>NP_870992 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMLPRE 6 TMLP+E Sbjct: 100 TMLPKE 105>NP_001007073 Length = 146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMLPRE 6 TMLP+E Sbjct: 100 TMLPKE 105>XP_005256041 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMLPRES 7 ++LPRES Sbjct: 274 SLLPRES 280>XP_005256040 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMLPRES 7 ++LPRES Sbjct: 281 SLLPRES 287>XP_006721057 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TMLPRES 7 T+LPRE+ Sbjct: 98 TILPRET 104>XP_005254992 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMLPRE 6 TMLP+E Sbjct: 100 TMLPKE 105Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.119 0.315 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 570,118 Number of extensions: 377 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |