Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 18 1135 NP_001120972 18 1135 XP_006716052 18 1135 XP_006716051 18 1135 NP_001127945 18 1935 NP_001265113 18 1935 NP_055430 18 1935 XP_005255922 18 1935 XP_006721236 18 1935 XP_006721235 18 1935 XP_005255921 18 1935 XP_005255920 18 1935 XP_005255919 18 1935 XP_005255918 18 1935 XP_005255917 18 1935 XP_005255916 18 1935 NP_001822 17 2528 XP_006716347 17 2528 NP_291032 17 3301 NP_001229453 17 3301 NP_001229454 17 3301 NP_006018 17 3301 NP_569082 17 3301 NP_003677 17 3301 XP_005273407 17 3301 XP_006711903 17 3301 NP_036596 16 5631 NP_003743 16 5631 NP_001254503 16 5631 NP_001273407 16 5631 NP_001032897 16 5631 NP_071894 16 5631 NP_001186071 16 5631 NP_001093131 16 5631 NP_001191689 16 5631 XP_005255592 16 5631 XP_006714356 16 5631 XP_006712752 16 5631 NP_000386 16 7355 NP_006368 16 7355 NP_001073890 16 7355 XP_005261399 16 7355 XP_005261397 16 7355 XP_006722755 16 7355 XP_006716779 16 7355 NP_001035808 15 9605 NP_061845 15 9605 NP_003592 15 9605 NP_803876 15 9605 NP_001257321 15 9605 NP_001257320 15 9605 NP_958834 15 9605 NP_001271286 15 9605 NP_001185947 15 9605 NP_001185946 15 9605 NP_079007 15 9605 NP_060161 15 9605 XP_005256206 15 9605 NP_006133 15 9605>NP_000236 Length = 1390 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLVQRSN E Sbjct: 17 TLVQRSNGE 25>NP_001120972 Length = 1408 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLVQRSN E Sbjct: 17 TLVQRSNGE 25>XP_006716052 Length = 1409 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLVQRSN E Sbjct: 36 TLVQRSNGE 44>XP_006716051 Length = 1427 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLVQRSN E Sbjct: 36 TLVQRSNGE 44>NP_001127945 Length = 1113 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 383 LIQRTNEE 390>NP_001265113 Length = 1144 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 414 LIQRTNEE 421>NP_055430 Length = 1217 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 487 LIQRTNEE 494>XP_005255922 Length = 1154 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 424 LIQRTNEE 431>XP_006721236 Length = 1214 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 484 LIQRTNEE 491>XP_006721235 Length = 1214 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 484 LIQRTNEE 491>XP_005255921 Length = 1227 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 497 LIQRTNEE 504>XP_005255920 Length = 1229 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 499 LIQRTNEE 506>XP_005255919 Length = 1860 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 1292 LIQRTNEE 1299>XP_005255918 Length = 1949 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 1219 LIQRTNEE 1226>XP_005255917 Length = 1984 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 1292 LIQRTNEE 1299>XP_005255916 Length = 2022 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QR+NEE Sbjct: 1292 LIQRTNEE 1299>NP_001822 Length = 449 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLVQRSNEE 9 TL++++NEE Sbjct: 58 TLIEKTNEE 66>XP_006716347 Length = 501 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLVQRSNEE 9 TL++++NEE Sbjct: 110 TLIEKTNEE 118>NP_291032 Length = 260 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLVQRSN 7 TL+QRSN Sbjct: 103 TLIQRSN 109>NP_001229453 Length = 260 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLVQRSN 7 TL+QRSN Sbjct: 103 TLIQRSN 109>NP_001229454 Length = 260 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLVQRSN 7 TL+QRSN Sbjct: 103 TLIQRSN 109>NP_006018 Length = 846 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQRSNEE 9 T +QR NEE Sbjct: 485 TFLQRKNEE 493>NP_569082 Length = 846 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQRSNEE 9 T +QR NEE Sbjct: 485 TFLQRKNEE 493>NP_003677 Length = 803 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQRSNEE 9 T +QR NEE Sbjct: 485 TFLQRKNEE 493>XP_005273407 Length = 845 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQRSNEE 9 T +QR NEE Sbjct: 484 TFLQRKNEE 492>XP_006711903 Length = 846 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQRSNEE 9 T +QR NEE Sbjct: 485 TFLQRKNEE 493>NP_036596 Length = 1013 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 T ++RS+EE Sbjct: 192 TFIERSDEE 200>NP_003743 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLV+R +EE Sbjct: 446 TLVERMDEE 454>NP_001254503 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLV+R +EE Sbjct: 446 TLVERMDEE 454>NP_001273407 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLV+R +EE Sbjct: 436 TLVERMDEE 444>NP_001032897 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLV+R +EE Sbjct: 446 TLVERMDEE 454>NP_071894 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QRS+EE Sbjct: 180 LLQRSDEE 187>NP_001186071 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLV+R +EE Sbjct: 446 TLVERMDEE 454>NP_001093131 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLV+R +EE Sbjct: 447 TLVERMDEE 455>NP_001191689 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 T ++RS+EE Sbjct: 192 TFIERSDEE 200>XP_005255592 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TLV+R +EE Sbjct: 447 TLVERMDEE 455>XP_006714356 Length = 964 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 T ++RS+EE Sbjct: 143 TFIERSDEE 151>XP_006712752 Length = 190 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 L+QRS+EE Sbjct: 158 LLQRSDEE 165>NP_000386 Length = 897 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TL++R NE+ Sbjct: 60 TLIRRVNED 68>NP_006368 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVQRSNEE 9 L QRSN+E Sbjct: 1565 LSQRSNDE 1572>NP_001073890 Length = 1703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVQRSNEE 9 L QRSN+E Sbjct: 1672 LSQRSNDE 1679>XP_005261399 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TL++R NE+ Sbjct: 60 TLIRRVNED 68>XP_005261397 Length = 903 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 TL++R NE+ Sbjct: 60 TLIRRVNED 68>XP_006722755 Length = 1722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVQRSNEE 9 L QRSN+E Sbjct: 1691 LSQRSNDE 1698>XP_006716779 Length = 2399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVQRSNEE 9 L QRSN+E Sbjct: 2373 LSQRSNDE 2380>NP_001035808 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQRSNEE 9 T +QR NEE Sbjct: 153 TELQRRNEE 161>NP_061845 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQRSNEE 9 T +QR NEE Sbjct: 221 TELQRRNEE 229>NP_003592 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLVQRSNEE 9 TL++R N E Sbjct: 1006 TLIERENME 1014>NP_803876 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 +++QR NEE Sbjct: 294 SILQRLNEE 302>NP_001257321 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 +++QR NEE Sbjct: 282 SILQRLNEE 290>NP_001257320 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 +++QR NEE Sbjct: 260 SILQRLNEE 268>NP_958834 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 +++QR NEE Sbjct: 326 SILQRLNEE 334>NP_001271286 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 ++QRS+EE Sbjct: 70 ILQRSSEE 77>NP_001185947 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 ++QRS+EE Sbjct: 36 ILQRSSEE 43>NP_001185946 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 ++QRS+EE Sbjct: 85 ILQRSSEE 92>NP_079007 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 T++QR NE+ Sbjct: 31 TVLQRLNEQ 39>NP_060161 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVQRSNEE 9 ++QRS+EE Sbjct: 80 ILQRSSEE 87>XP_005256206 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 T++QR NE+ Sbjct: 31 TVLQRLNEQ 39>NP_006133 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLVQRSNEE 9 ++ Q+SNEE Sbjct: 64 SIEQKSNEE 72Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.112 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 432,539 Number of extensions: 794 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |