Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 18 1135 NP_001091680 18 1135 NP_001091679 18 1135 XP_006713048 18 1135 XP_006713047 18 1135 XP_006713046 18 1135 XP_005264943 18 1135 NP_002053 18 1935 XP_006715128 18 1935 XP_006714348 18 1935 XP_006714347 18 1935 NP_001093896 18 1935 NP_001093898 18 1935 NP_066982 18 1935 NP_001093897 18 1935 NP_001093899 18 1935 NP_000155 17 3301 NP_060656 17 4312 NP_005947 17 4312 NP_000151 17 4312 XP_006722340 17 4312 XP_006722339 17 4312 XP_005245374 17 4312 NP_036430 16 5631 NP_001155971 16 5631 NP_060734 16 7355 NP_001030025 15 9605 NP_000319 15 9605 NP_997352 15 9605 NP_663626 15 9605 NP_001091984 15 9605 NP_689672 15 9605 NP_001265539 15 9605 NP_002457 15 9605 NP_569733 15 9605 NP_904324 15 9605 NP_001091079 15 9605 XP_006725313 15 9605 XP_005272690 15 9605 XP_006724601 15 9605 XP_005277990 15 9605 XP_005255200 15 9605 XP_006719745 15 9605 XP_006719744 15 9605 XP_005254044 15 9605 XP_005252861 15 9605 XP_006713065 15 9605 XP_005264953 15 9605 XP_006713064 15 9605 XP_006713063 15 9605 XP_006713062 15 9605 XP_006713061 15 9605 XP_006713060 15 9605 XP_006713059 15 9605 XP_006713058 15 9605 XP_006713057 15 9605 NP_955379 15 9605>NP_001895 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TLVQLLGS 8 TLVQLLGS Sbjct: 404 TLVQLLGS 411>NP_001091680 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TLVQLLGS 8 TLVQLLGS Sbjct: 404 TLVQLLGS 411>NP_001091679 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TLVQLLGS 8 TLVQLLGS Sbjct: 404 TLVQLLGS 411>XP_006713048 Length = 720 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TLVQLLGS 8 TLVQLLGS Sbjct: 404 TLVQLLGS 411>XP_006713047 Length = 774 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TLVQLLGS 8 TLVQLLGS Sbjct: 397 TLVQLLGS 404>XP_006713046 Length = 774 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TLVQLLGS 8 TLVQLLGS Sbjct: 397 TLVQLLGS 404>XP_005264943 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TLVQLLGS 8 TLVQLLGS Sbjct: 404 TLVQLLGS 411>NP_002053 Length = 463 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLVQLLGSH 9 TL+ LLG+H Sbjct: 355 TLIPLLGTH 363>XP_006715128 Length = 463 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLVQLLGSH 9 TL+ LLG+H Sbjct: 355 TLIPLLGTH 363>XP_006714348 Length = 478 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLVQLLGSH 9 TLV+LLG H Sbjct: 55 TLVKLLGIH 63>XP_006714347 Length = 527 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLVQLLGSH 9 TLV+LLG H Sbjct: 104 TLVKLLGIH 112>NP_001093896 Length = 608 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLVQLLGSH 9 TLV+LLG H Sbjct: 185 TLVKLLGIH 193>NP_001093898 Length = 559 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLVQLLGSH 9 TLV+LLG H Sbjct: 136 TLVKLLGIH 144>NP_066982 Length = 607 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLVQLLGSH 9 TLV+LLG H Sbjct: 185 TLVKLLGIH 193>NP_001093897 Length = 607 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLVQLLGSH 9 TLV+LLG H Sbjct: 184 TLVKLLGIH 192>NP_001093899 Length = 558 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLVQLLGSH 9 TLV+LLG H Sbjct: 135 TLVKLLGIH 143>NP_000155 Length = 466 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLVQLLGSH 9 TLV LLG H Sbjct: 345 TLVPLLGVH 353>NP_060656 Length = 853 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLVQLLGS 8 T+VQLLG+ Sbjct: 58 TMVQLLGA 65>NP_005947 Length = 935 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVQLLGSH 9 LVQ LG+H Sbjct: 393 LVQALGAH 400>NP_000151 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQLLGSH 9 TL+ LLG H Sbjct: 353 TLIPLLGVH 361>XP_006722340 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQLLGSH 9 TL+ LLG H Sbjct: 353 TLIPLLGVH 361>XP_006722339 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQLLGSH 9 TL+ LLG H Sbjct: 383 TLIPLLGVH 391>XP_005245374 Length = 911 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLVQLLGS 8 T+VQLLG+ Sbjct: 116 TMVQLLGA 123>NP_036430 Length = 1119 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TL+Q LGS Sbjct: 143 TLIQCLGS 150>NP_001155971 Length = 1236 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TL+Q LGS Sbjct: 236 TLIQCLGS 243>NP_060734 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLLGSH 9 QL+GSH Sbjct: 370 QLIGSH 375>NP_001030025 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLLGSH 9 QLLG+H Sbjct: 227 QLLGNH 232>NP_000319 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLLGSH 9 QLLG+H Sbjct: 227 QLLGNH 232>NP_997352 Length = 95 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVQLLGSH 9 L QL+G+H Sbjct: 67 LPQLIGNH 74>NP_663626 Length = 95 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVQLLGS 8 LVQ+LGS Sbjct: 85 LVQVLGS 91>NP_001091984 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVQLLGS 8 LVQLLG+ Sbjct: 163 LVQLLGT 169>NP_689672 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVQLLGS 8 LVQLLG+ Sbjct: 163 LVQLLGT 169>NP_001265539 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQLLGSH 9 +LVQL SH Sbjct: 319 SLVQLQASH 327>NP_002457 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLVQLLGSH 9 +LVQL SH Sbjct: 343 SLVQLQASH 351>NP_569733 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LVQLLGSH 9 L QLLG H Sbjct: 801 LSQLLGHH 808>NP_904324 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LVQLLGSH 9 L QLLG H Sbjct: 801 LSQLLGHH 808>NP_001091079 Length = 95 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVQLLGS 8 LVQ+LGS Sbjct: 85 LVQVLGS 91>XP_006725313 Length = 95 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVQLLGS 8 LVQ+LGS Sbjct: 85 LVQVLGS 91>XP_005272690 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLLGSH 9 QLLG+H Sbjct: 227 QLLGNH 232>XP_006724601 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLLGSH 9 QLLG+H Sbjct: 227 QLLGNH 232>XP_005277990 Length = 95 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVQLLGS 8 LVQ+LGS Sbjct: 85 LVQVLGS 91>XP_005255200 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVQLLGS 8 LVQLLG+ Sbjct: 201 LVQLLGT 207>XP_006719745 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LVQLLGSH 9 L QLLG H Sbjct: 801 LSQLLGHH 808>XP_006719744 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LVQLLGSH 9 L QLLG H Sbjct: 801 LSQLLGHH 808>XP_005254044 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LVQLLGSH 9 L QLLG H Sbjct: 801 LSQLLGHH 808>XP_005252861 Length = 95 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVQLLGS 8 LVQ+LGS Sbjct: 85 LVQVLGS 91>XP_006713065 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220>XP_005264953 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220>XP_006713064 Length = 1115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220>XP_006713063 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220>XP_006713062 Length = 1158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220>XP_006713061 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220>XP_006713060 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220>XP_006713059 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220>XP_006713058 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220>XP_006713057 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220>NP_955379 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLVQLLGS 8 TLV LLG+ Sbjct: 213 TLVNLLGA 220Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.137 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 438,257 Number of extensions: 648 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |