Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_056306                                                              17    4312
NP_116259                                                              17    4312
XP_006715515                                                           17    4312
XP_006715514                                                           17    4312
XP_006715513                                                           17    4312
XP_005266974                                                           17    4312
XP_005266973                                                           17    4312
XP_005266972                                                           17    4312
XP_005266971                                                           17    4312
XP_005266970                                                           17    4312
XP_005266969                                                           17    4312
NP_775271                                                              16    5631
NP_775096                                                              16    5631
NP_057029                                                              16    5631
NP_001268389                                                           16    5631
NP_001268388                                                           16    5631
NP_001268386                                                           16    5631
NP_001268387                                                           16    5631
XP_006723864                                                           16    5631
XP_005260471                                                           16    5631
NP_055643                                                              16    5631
NP_001267474                                                           16    7355
NP_060732                                                              16    7355
NP_443715                                                              16    7355
NP_443716                                                              16    7355
NP_001267470                                                           16    7355
NP_443711                                                              16    7355
NP_001267475                                                           16    7355
NP_001157745                                                           16    7355
NP_001018098                                                           16    7355
NP_060154                                                              16    7355
NP_060550                                                              16    7355
NP_001074010                                                           16    7355
NP_065872                                                              16    7355
XP_005254310                                                           16    7355
XP_005254309                                                           16    7355
XP_005254306                                                           16    7355
XP_005254305                                                           16    7355
XP_005254304                                                           16    7355
XP_005254303                                                           16    7355
XP_006720506                                                           16    7355
XP_005254302                                                           16    7355
XP_005254301                                                           16    7355
XP_006720505                                                           16    7355
XP_005254300                                                           16    7355
XP_006713758                                                           16    7355
XP_006713757                                                           16    7355
XP_006713756                                                           16    7355
XP_005247668                                                           16    7355
XP_006713755                                                           16    7355
XP_005247667                                                           16    7355
XP_005247666                                                           16    7355
XP_005247665                                                           16    7355
XP_005247664                                                           16    7355
XP_006713754                                                           16    7355
XP_006713753                                                           16    7355
XP_005247661                                                           16    7355
XP_006713752                                                           16    7355
XP_005247660                                                           16    7355
NP_001182760                                                           15    9605
NP_005299                                                              15    9605
NP_004450                                                              15    9605
NP_872579                                                              15    9605
XP_005257218                                                           15    9605
XP_005257217                                                           15    9605
XP_005257216                                                           15    9605
XP_005257215                                                           15    9605
XP_005257214                                                           15    9605
XP_005257213                                                           15    9605
XP_005257212                                                           15    9605
XP_006721834                                                           15    9605
XP_005257211                                                           15    9605
XP_005257210                                                           15    9605
XP_005257209                                                           15    9605
XP_005257208                                                           15    9605
XP_006721833                                                           15    9605
XP_005257207                                                           15    9605
XP_006719746                                                           15    9605
XP_005253685                                                           15    9605
XP_005253684                                                           15    9605
XP_005269765                                                           15    9605
XP_005269764                                                           15    9605
XP_006710446                                                           15    9605
XP_006710445                                                           15    9605
XP_005270577                                                           15    9605
NP_003950                                                              15    9605
>NP_056306
          Length = 805

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 337 LTKMLLTE 344
>NP_116259
          Length = 805

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 337 LTKMLLTE 344
>XP_006715515
          Length = 719

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 242 LTKMLLTE 249
>XP_006715514
          Length = 719

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 242 LTKMLLTE 249
>XP_006715513
          Length = 719

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 242 LTKMLLTE 249
>XP_005266974
          Length = 814

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 337 LTKMLLTE 344
>XP_005266973
          Length = 814

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 337 LTKMLLTE 344
>XP_005266972
          Length = 814

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 337 LTKMLLTE 344
>XP_005266971
          Length = 859

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 400 LTKMLLTE 407
>XP_005266970
          Length = 868

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 400 LTKMLLTE 407
>XP_005266969
          Length = 877

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           LTKM+LT+
Sbjct: 400 LTKMLLTE 407
>NP_775271
          Length = 365

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TLTKMILTK 9
           TLT+M+L K
Sbjct: 181 TLTQMLLQK 189
>NP_775096
          Length = 344

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TLTKMILTK 9
           TLT+M+L K
Sbjct: 160 TLTQMLLQK 168
>NP_057029
          Length = 365

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TLTKMILTK 9
           TLT+M+L K
Sbjct: 181 TLTQMLLQK 189
>NP_001268389
          Length = 365

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TLTKMILTK 9
           TLT+M+L K
Sbjct: 181 TLTQMLLQK 189
>NP_001268388
          Length = 230

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  TLTKMILTK 9
          TLT+M+L K
Sbjct: 46 TLTQMLLQK 54
>NP_001268386
          Length = 251

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  TLTKMILTK 9
          TLT+M+L K
Sbjct: 67 TLTQMLLQK 75
>NP_001268387
          Length = 394

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TLTKMILTK 9
           TLT+M+L K
Sbjct: 210 TLTQMLLQK 218
>XP_006723864
          Length = 336

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TLTKMILTK 9
           TLT+M+L K
Sbjct: 181 TLTQMLLQK 189
>XP_005260471
          Length = 365

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TLTKMILTK 9
           TLT+M+L K
Sbjct: 181 TLTQMLLQK 189
>NP_055643
          Length = 621

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   LTKMILTK 9
           +TK+I+TK
Sbjct: 365 ITKLIITK 372
>NP_001267474
          Length = 1091

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 597 TKMLITK 603
>NP_060732
          Length = 1182

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 688 TKMLITK 694
>NP_443715
          Length = 1241

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 747 TKMLITK 753
>NP_443716
          Length = 1131

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 636 TKMLITK 642
>NP_001267470
          Length = 1234

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 739 TKMLITK 745
>NP_443711
          Length = 1292

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 798 TKMLITK 804
>NP_001267475
          Length = 1032

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 538 TKMLITK 544
>NP_001157745
          Length = 3065

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>NP_001018098
          Length = 3628

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LTKMILTK 9
            L KM+LTK
Sbjct: 1505 LLKMLLTK 1512
>NP_060154
          Length = 3710

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LTKMILTK 9
            L KM+LTK
Sbjct: 1462 LLKMLLTK 1469
>NP_060550
          Length = 3585

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LTKMILTK 9
            L KM+LTK
Sbjct: 1462 LLKMLLTK 1469
>NP_001074010
          Length = 2856

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>NP_065872
          Length = 3753

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LTKMILTK 9
            L KM+LTK
Sbjct: 1505 LLKMLLTK 1512
>XP_005254310
          Length = 2906

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_005254309
          Length = 2956

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_005254306
          Length = 3066

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_005254305
          Length = 3114

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_005254304
          Length = 3115

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_005254303
          Length = 3115

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_006720506
          Length = 3115

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_005254302
          Length = 3115

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_005254301
          Length = 3115

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_006720505
          Length = 3115

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_005254300
          Length = 3115

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TKMILTK 9
          T+MILTK
Sbjct: 93 TEMILTK 99
>XP_006713758
          Length = 877

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 747 TKMLITK 753
>XP_006713757
          Length = 1034

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 538 TKMLITK 544
>XP_006713756
          Length = 1093

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 597 TKMLITK 603
>XP_005247668
          Length = 1132

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 636 TKMLITK 642
>XP_006713755
          Length = 1165

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 670 TKMLITK 676
>XP_005247667
          Length = 1183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 688 TKMLITK 694
>XP_005247666
          Length = 1183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 688 TKMLITK 694
>XP_005247665
          Length = 1184

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 688 TKMLITK 694
>XP_005247664
          Length = 1191

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 695 TKMLITK 701
>XP_006713754
          Length = 1224

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 729 TKMLITK 735
>XP_006713753
          Length = 1225

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 729 TKMLITK 735
>XP_005247661
          Length = 1242

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 747 TKMLITK 753
>XP_006713752
          Length = 1242

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 747 TKMLITK 753
>XP_005247660
          Length = 1243

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TKM++TK
Sbjct: 747 TKMLITK 753
>NP_001182760
          Length = 1283

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LTKMILT 8
           +TKM+LT
Sbjct: 641 ITKMLLT 647
>NP_005299
          Length = 590

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   TLTKMILTK 9
           ++ KM+LTK
Sbjct: 418 SICKMLLTK 426
>NP_004450
          Length = 2903

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2086 TGTKMVLT 2093
>NP_872579
          Length = 2920

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 1960 TGTKMVLT 1967
>XP_005257218
          Length = 2957

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2086 TGTKMVLT 2093
>XP_005257217
          Length = 2961

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2086 TGTKMVLT 2093
>XP_005257216
          Length = 3015

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2086 TGTKMVLT 2093
>XP_005257215
          Length = 3032

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 1960 TGTKMVLT 1967
>XP_005257214
          Length = 3094

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2022 TGTKMVLT 2029
>XP_005257213
          Length = 3095

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2023 TGTKMVLT 2030
>XP_005257212
          Length = 3095

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2023 TGTKMVLT 2030
>XP_006721834
          Length = 3100

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2086 TGTKMVLT 2093
>XP_005257211
          Length = 3100

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2086 TGTKMVLT 2093
>XP_005257210
          Length = 3104

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2086 TGTKMVLT 2093
>XP_005257209
          Length = 3148

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2086 TGTKMVLT 2093
>XP_005257208
          Length = 3157

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2085 TGTKMVLT 2092
>XP_006721833
          Length = 3158

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2086 TGTKMVLT 2093
>XP_005257207
          Length = 3158

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    TLTKMILT 8
            T TKM+LT
Sbjct: 2086 TGTKMVLT 2093
>XP_006719746
          Length = 603

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TK++LTK
Sbjct: 122 TKLLLTK 128
>XP_005253685
          Length = 1061

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TK++LTK
Sbjct: 122 TKLLLTK 128
>XP_005253684
          Length = 1073

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TK++LTK
Sbjct: 134 TKLLLTK 140
>XP_005269765
          Length = 558

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   TLTKMILTK 9
           ++ KM+LTK
Sbjct: 386 SICKMLLTK 394
>XP_005269764
          Length = 560

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   TLTKMILTK 9
           ++ KM+LTK
Sbjct: 388 SICKMLLTK 396
>XP_006710446
          Length = 1239

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LTKMILT 8
           +TKM+LT
Sbjct: 630 ITKMLLT 636
>XP_006710445
          Length = 1250

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LTKMILT 8
           +TKM+LT
Sbjct: 641 ITKMLLT 647
>XP_005270577
          Length = 1250

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LTKMILT 8
           +TKM+LT
Sbjct: 641 ITKMLLT 647
>NP_003950
          Length = 1068

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TKMILTK 9
           TK++LTK
Sbjct: 134 TKLLLTK 140
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.323    0.129    0.309 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 271,065
Number of extensions: 341
Number of successful extensions: 86
Number of sequences better than 10000.0: 86
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 86
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package