Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_003632 17 2528 XP_005258838 17 2528 NP_775904 17 2528 NP_061859 16 5631 XP_006713954 16 5631 XP_006713953 16 5631 XP_006713952 16 5631 XP_005248031 16 5631 XP_006713951 16 5631 NP_878908 16 7355 NP_569733 16 7355 NP_904324 16 7355 NP_055501 16 7355 NP_001275677 16 7355 NP_061740 16 7355 NP_114442 16 7355 XP_006726924 16 7355 XP_005259501 16 7355 XP_006719745 16 7355 XP_006719744 16 7355 XP_005254044 16 7355 NP_006454 15 9605 NP_998787 15 9605 NP_964010 15 9605 NP_001182192 15 9605 NP_079171 15 9605 NP_001231 15 9605 NP_490595 15 9605 XP_006722961 15 9605 XP_006718038 15 9605 XP_005270222 15 9605 XP_005263889 15 9605 XP_006712890 15 9605 XP_005263888 15 9605 XP_005263887 15 9605 XP_005264148 15 9605 XP_005264145 15 9605 XP_006711984 15 9605 XP_006711983 15 9605 NP_001232 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LTHVMLQI 9 LTHVMLQI Sbjct: 2510 LTHVMLQI 2517>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LTHVMLQI 9 LTHVMLQI Sbjct: 2305 LTHVMLQI 2312>NP_003632 Length = 125 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLTHVMLQI 9 T+ H+MLQI Sbjct: 110 TVYHIMLQI 118>XP_005258838 Length = 563 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLTHVMLQI 9 TLTHV+L I Sbjct: 302 TLTHVVLLI 310>NP_775904 Length = 493 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLTHVMLQI 9 TLTHV+L I Sbjct: 288 TLTHVVLLI 296>NP_061859 Length = 1336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 THVMLQI 9 THV+LQ+ Sbjct: 946 THVLLQL 952>XP_006713954 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 THVMLQI 9 THV+LQ+ Sbjct: 653 THVLLQL 659>XP_006713953 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 THVMLQI 9 THV+LQ+ Sbjct: 653 THVLLQL 659>XP_006713952 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 THVMLQI 9 THV+LQ+ Sbjct: 775 THVLLQL 781>XP_005248031 Length = 1260 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 THVMLQI 9 THV+LQ+ Sbjct: 870 THVLLQL 876>XP_006713951 Length = 1309 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 THVMLQI 9 THV+LQ+ Sbjct: 919 THVLLQL 925>NP_878908 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TLTHVML 7 T THVML Sbjct: 197 TKTHVML 203>NP_569733 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLTHVMLQI 9 TLT + LQI Sbjct: 473 TLTQIRLQI 481>NP_904324 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLTHVMLQI 9 TLT + LQI Sbjct: 473 TLTQIRLQI 481>NP_055501 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 THVMLQI 9 TH MLQ+ Sbjct: 368 THTMLQL 374>NP_001275677 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLTHVMLQI 9 T+TH ML + Sbjct: 503 TVTHFMLAV 511>NP_061740 Length = 962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLTHVMLQI 9 T TH+ LQ+ Sbjct: 465 TETHISLQV 473>NP_114442 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLTHVMLQI 9 T TH+ LQ+ Sbjct: 465 TETHISLQV 473>XP_006726924 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TLTHVML 7 T THVML Sbjct: 183 TKTHVML 189>XP_005259501 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 THVMLQI 9 TH MLQ+ Sbjct: 368 THTMLQL 374>XP_006719745 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLTHVMLQI 9 TLT + LQI Sbjct: 473 TLTQIRLQI 481>XP_006719744 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLTHVMLQI 9 TLT + LQI Sbjct: 473 TLTQIRLQI 481>XP_005254044 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLTHVMLQI 9 TLT + LQI Sbjct: 473 TLTQIRLQI 481>NP_006454 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TLTHVML 7 T+THV++ Sbjct: 295 TITHVLI 301>NP_998787 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TLTHVML 7 T+THV++ Sbjct: 295 TITHVLI 301>NP_964010 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TLTHVML 7 T+THV++ Sbjct: 295 TITHVLI 301>NP_001182192 Length = 1033 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 THVMLQI 9 TH+ML I Sbjct: 282 THIMLTI 288>NP_079171 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 THVMLQI 9 TH+ML I Sbjct: 282 THIMLTI 288>NP_001231 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTHVMLQI 9 LTH LQI Sbjct: 237 LTHEFLQI 244>NP_490595 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTHVMLQI 9 LTH LQI Sbjct: 236 LTHEFLQI 243>XP_006722961 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLTHVMLQ 8 T+TH +LQ Sbjct: 17 TMTHRLLQ 24>XP_006718038 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 THVMLQI 9 TH+ML I Sbjct: 282 THIMLTI 288>XP_005270222 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 THVMLQI 9 TH+ML I Sbjct: 282 THIMLTI 288>XP_005263889 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTHVMLQI 9 LTH LQI Sbjct: 61 LTHEFLQI 68>XP_006712890 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTHVMLQI 9 LTH LQI Sbjct: 92 LTHEFLQI 99>XP_005263888 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTHVMLQI 9 LTH LQI Sbjct: 92 LTHEFLQI 99>XP_005263887 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTHVMLQI 9 LTH LQI Sbjct: 215 LTHEFLQI 222>XP_005264148 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TLTHVML 7 T+THV++ Sbjct: 160 TITHVLI 166>XP_005264145 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TLTHVML 7 T+THV++ Sbjct: 295 TITHVLI 301>XP_006711984 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TLTHVML 7 T+THV++ Sbjct: 342 TITHVLI 348>XP_006711983 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TLTHVML 7 T+THV++ Sbjct: 342 TITHVLI 348>NP_001232 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTHVMLQI 9 LTH LQI Sbjct: 236 LTHEFLQI 243Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.138 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 528,807 Number of extensions: 814 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |