Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001159451 18 1482 XP_006717953 18 1482 NP_004295 18 1935 NP_997719 17 4312 NP_002221 16 5631 NP_001895 16 5631 NP_001091680 16 5631 NP_068831 16 5631 NP_001091679 16 5631 NP_001020272 16 5631 NP_001020252 16 5631 NP_001020261 16 5631 NP_002376 16 5631 NP_001020263 16 5631 NP_996772 16 5631 NP_001157463 16 5631 XP_005266756 16 5631 XP_006721941 16 5631 XP_006721940 16 5631 XP_006721939 16 5631 XP_006721938 16 5631 XP_006721937 16 5631 XP_006721936 16 5631 XP_006721935 16 5631 XP_006721934 16 5631 XP_005257370 16 5631 XP_006713048 16 5631 XP_006713047 16 5631 XP_006713046 16 5631 XP_005264943 16 5631 NP_877438 16 5631 NP_001004760 16 5631 NP_001123537 15 9605 NP_004136 15 9605 XP_006722821 15 9605 XP_006722820 15 9605 XP_005259972 15 9605 XP_006722819 15 9605 XP_006722818 15 9605>NP_001159451 Length = 1994 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLS VLKVG Sbjct: 59 TLSAVLKVG 67>XP_006717953 Length = 2008 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLS VLKVG Sbjct: 59 TLSAVLKVG 67>NP_004295 Length = 1620 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLSRVLK G Sbjct: 122 TLSRVLKGG 130>NP_997719 Length = 291 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 TLSRVLKV 8 +LSRVLKV Sbjct: 176 SLSRVLKV 183>NP_002221 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 330 TTSRVLKV 337>NP_001895 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 339 TTSRVLKV 346>NP_001091680 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 339 TTSRVLKV 346>NP_068831 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 330 TTSRVLKV 337>NP_001091679 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 339 TTSRVLKV 346>NP_001020272 Length = 304 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLS++ K+G Sbjct: 283 TLSKIFKLG 291>NP_001020252 Length = 197 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLS++ K+G Sbjct: 176 TLSKIFKLG 184>NP_001020261 Length = 171 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLS++ K+G Sbjct: 150 TLSKIFKLG 158>NP_002376 Length = 186 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLS++ K+G Sbjct: 165 TLSKIFKLG 173>NP_001020263 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLS++ K+G Sbjct: 139 TLSKIFKLG 147>NP_996772 Length = 889 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSRVLKVG 9 +SRVL+VG Sbjct: 874 MSRVLQVG 881>NP_001157463 Length = 282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLS V++VG Sbjct: 115 TLSEVVRVG 123>XP_005266756 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLS++ K+G Sbjct: 272 TLSKIFKLG 280>XP_006721941 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721940 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721939 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721938 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721937 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721936 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721935 Length = 762 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 347 TTSRVLKV 354>XP_006721934 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 368 TTSRVLKV 375>XP_005257370 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 368 TTSRVLKV 375>XP_006713048 Length = 720 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 339 TTSRVLKV 346>XP_006713047 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 332 TTSRVLKV 339>XP_006713046 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 332 TTSRVLKV 339>XP_005264943 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLSRVLKV 8 T SRVLKV Sbjct: 339 TTSRVLKV 346>NP_877438 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 TLS V++VG Sbjct: 162 TLSEVVRVG 170>NP_001004760 Length = 321 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSRVLKVG 9 T SR++K+G Sbjct: 146 TNSRIIKIG 154>NP_001123537 Length = 2022 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSRVLKV 8 TLS++LKV Sbjct: 437 TLSQLLKV 444>NP_004136 Length = 2157 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSRVLKV 8 TLS++LKV Sbjct: 437 TLSQLLKV 444>XP_006722821 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSRVLKV 8 TLS++LKV Sbjct: 437 TLSQLLKV 444>XP_006722820 Length = 2140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSRVLKV 8 TLS++LKV Sbjct: 437 TLSQLLKV 444>XP_005259972 Length = 2141 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSRVLKV 8 TLS++LKV Sbjct: 437 TLSQLLKV 444>XP_006722819 Length = 2156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSRVLKV 8 TLS++LKV Sbjct: 437 TLSQLLKV 444>XP_006722818 Length = 2157 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSRVLKV 8 TLS++LKV Sbjct: 437 TLSQLLKV 444Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.138 0.347 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 274,439 Number of extensions: 392 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |