Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1482 XP_005262424 18 1482 NP_001230050 17 3301 NP_001104779 17 3301 NP_006193 17 3301 NP_001104778 17 3301 NP_001104777 17 3301 XP_005259990 17 3301 XP_006722828 17 3301 NP_001184151 17 4312 NP_001159371 17 4312 NP_001184149 17 4312 NP_001184152 17 4312 NP_001184150 17 4312 NP_001098101 17 4312 NP_006194 17 4312 NP_001184147 17 4312 NP_001184148 17 4312 XP_005248598 17 4312 XP_005248597 17 4312 XP_005248595 17 4312 XP_005248594 17 4312 NP_057030 16 5631 NP_057329 16 7355 NP_055912 16 7355 NP_001193973 16 7355 NP_689654 16 7355 XP_006714295 16 7355 XP_006713123 16 7355 XP_006713121 16 7355 XP_006713120 16 7355 XP_006713119 16 7355 XP_006713118 16 7355 XP_006713117 16 7355 XP_006713116 16 7355 XP_006713115 16 7355 XP_006713114 16 7355 XP_006713113 16 7355 XP_006713112 16 7355 XP_006713111 16 7355 XP_006713110 16 7355 XP_006713109 16 7355 XP_006713108 16 7355 XP_006713107 16 7355 XP_006713106 16 7355 XP_006713105 16 7355 XP_006713104 16 7355 XP_006713103 16 7355 XP_006713102 16 7355 XP_006713101 16 7355 XP_006713100 16 7355 XP_006713099 16 7355 NP_001124295 15 9605 NP_001004051 15 9605 NP_001171804 15 9605 NP_612446 15 9605 NP_001171805 15 9605 NP_001171803 15 9605 NP_001186747 15 9605 NP_001164655 15 9605 NP_062540 15 9605 NP_001930 15 9605 NP_001120717 15 9605 NP_001120716 15 9605 XP_005252152 15 9605 XP_005252153 15 9605 XP_006717249 15 9605 XP_006712115 15 9605 NP_064507 15 9605 NP_001026979 15 9605 NP_006129 15 9605>NP_722576 Length = 3080 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSQITGVK 9 T SQITGVK Sbjct: 251 TPSQITGVK 259>XP_005262424 Length = 2875 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSQITGVK 9 T SQITGVK Sbjct: 46 TPSQITGVK 54>NP_001230050 Length = 864 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQITG+K Sbjct: 310 MSQITGLK 317>NP_001104779 Length = 825 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQITG+K Sbjct: 271 MSQITGLK 278>NP_006193 Length = 647 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQITG+K Sbjct: 93 MSQITGLK 100>NP_001104778 Length = 860 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQITG+K Sbjct: 306 MSQITGLK 313>NP_001104777 Length = 886 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQITG+K Sbjct: 332 MSQITGLK 339>XP_005259990 Length = 582 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQITG+K Sbjct: 28 MSQITGLK 35>XP_006722828 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQITG+K Sbjct: 145 MSQITGLK 152>NP_001184151 Length = 585 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 137 MSQISGVK 144>NP_001159371 Length = 748 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 300 MSQISGVK 307>NP_001184149 Length = 679 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 231 MSQISGVK 238>NP_001184152 Length = 518 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 70 MSQISGVK 77>NP_001184150 Length = 507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 59 MSQISGVK 66>NP_001098101 Length = 809 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 361 MSQISGVK 368>NP_006194 Length = 673 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 225 MSQISGVK 232>NP_001184147 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 297 MSQISGVK 304>NP_001184148 Length = 687 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 239 MSQISGVK 246>XP_005248598 Length = 507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 59 MSQISGVK 66>XP_005248597 Length = 597 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 149 MSQISGVK 156>XP_005248595 Length = 673 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 225 MSQISGVK 232>XP_005248594 Length = 699 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 +SQI+GVK Sbjct: 251 MSQISGVK 258>NP_057030 Length = 385 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LSQITGV 8 LSQ+TGV Sbjct: 356 LSQLTGV 362>NP_057329 Length = 300 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QITGVK 9 QITGVK Sbjct: 207 QITGVK 212>NP_055912 Length = 1515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1480 LSQLTGSK 1487>NP_001193973 Length = 1294 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1259 LSQLTGSK 1266>NP_689654 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSQITGV 8 LSQ+TG+ Sbjct: 355 LSQLTGI 361>XP_006714295 Length = 256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QITGVK 9 QITGVK Sbjct: 163 QITGVK 168>XP_006713123 Length = 1514 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1479 LSQLTGSK 1486>XP_006713121 Length = 1286 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1251 LSQLTGSK 1258>XP_006713120 Length = 1287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1252 LSQLTGSK 1259>XP_006713119 Length = 1308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1273 LSQLTGSK 1280>XP_006713118 Length = 1328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1293 LSQLTGSK 1300>XP_006713117 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1299 LSQLTGSK 1306>XP_006713116 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1472 LSQLTGSK 1479>XP_006713115 Length = 1514 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1479 LSQLTGSK 1486>XP_006713114 Length = 1523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1488 LSQLTGSK 1495>XP_006713113 Length = 1524 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1489 LSQLTGSK 1496>XP_006713112 Length = 1527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1492 LSQLTGSK 1499>XP_006713111 Length = 1532 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1497 LSQLTGSK 1504>XP_006713110 Length = 1533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1498 LSQLTGSK 1505>XP_006713109 Length = 1537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1502 LSQLTGSK 1509>XP_006713108 Length = 1541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1506 LSQLTGSK 1513>XP_006713107 Length = 1544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1509 LSQLTGSK 1516>XP_006713106 Length = 1545 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1510 LSQLTGSK 1517>XP_006713105 Length = 1545 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1510 LSQLTGSK 1517>XP_006713104 Length = 1552 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1517 LSQLTGSK 1524>XP_006713103 Length = 1553 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1518 LSQLTGSK 1525>XP_006713102 Length = 1554 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1519 LSQLTGSK 1526>XP_006713101 Length = 1561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1526 LSQLTGSK 1533>XP_006713100 Length = 1561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1526 LSQLTGSK 1533>XP_006713099 Length = 1562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSQITGVK 9 LSQ+TG K Sbjct: 1527 LSQLTGSK 1534>NP_001124295 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SQITGVK 9 SQ+TG++ Sbjct: 158 SQVTGIR 164>NP_001004051 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TLSQITGVK 9 +L Q+TG++ Sbjct: 693 SLEQLTGIR 701>NP_001171804 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TLSQITGVK 9 +L Q+TG++ Sbjct: 693 SLEQLTGIR 701>NP_612446 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TLSQITGVK 9 +L Q+TG++ Sbjct: 693 SLEQLTGIR 701>NP_001171805 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TLSQITGVK 9 +L Q+TG++ Sbjct: 693 SLEQLTGIR 701>NP_001171803 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TLSQITGVK 9 +L Q+TG++ Sbjct: 693 SLEQLTGIR 701>NP_001186747 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TLSQITGVK 9 +L Q+TG++ Sbjct: 693 SLEQLTGIR 701>NP_001164655 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSQITGVK 9 TLSQ GV+ Sbjct: 168 TLSQAEGVR 176>NP_062540 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TLSQITGVK 9 +++Q+TG+K Sbjct: 464 SIAQLTGLK 472>NP_001930 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSQITGVK 9 TLSQ GV+ Sbjct: 246 TLSQAEGVR 254>NP_001120717 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TLSQITGVK 9 +++Q+TG+K Sbjct: 464 SIAQLTGLK 472>NP_001120716 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TLSQITGVK 9 +++Q+TG+K Sbjct: 464 SIAQLTGLK 472>XP_005252152 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TLSQITGVK 9 +++Q+TG+K Sbjct: 464 SIAQLTGLK 472>XP_005252153 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TLSQITGVK 9 +++Q+TG+K Sbjct: 464 SIAQLTGLK 472>XP_006717249 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TLSQITGVK 9 +++Q+TG+K Sbjct: 464 SIAQLTGLK 472>XP_006712115 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 LSQ++GV+ Sbjct: 211 LSQLSGVR 218>NP_064507 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSQITGVK 9 LSQ++GV+ Sbjct: 203 LSQLSGVR 210>NP_001026979 Length = 168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLSQITGVK 9 TLS + G+K Sbjct: 58 TLSVVAGIK 66>NP_006129 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLSQITGVK 9 TLS + G+K Sbjct: 104 TLSVVAGIK 112Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.124 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 327,642 Number of extensions: 464 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |