Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001180451 19 869 NP_001180453 19 869 NP_001180452 19 869 NP_078795 19 869 XP_006721333 19 869 XP_006721332 19 869 NP_005179 18 1935 NP_001230352 18 1935 NP_004360 17 2528 XP_005246122 17 2528 XP_006712316 17 2528 NP_065194 17 4312 NP_055742 16 5631 NP_001162118 16 5631 NP_001162119 16 5631 NP_001162120 16 5631 XP_005274526 16 5631 XP_005274525 16 5631 NP_001018075 16 7355 NP_006171 16 7355 NP_001018074 16 7355 NP_001018076 16 7355 NP_569079 16 7355 NP_064520 16 7355 NP_009143 16 7355 NP_055309 16 7355 NP_110445 16 7355 NP_001257309 16 7355 NP_892014 16 7355 NP_001257310 16 7355 XP_006722977 16 7355 XP_005260143 16 7355 XP_005260145 16 7355 XP_005260142 16 7355 XP_005260144 16 7355 XP_006721103 16 7355 XP_005255314 16 7355 XP_006721102 16 7355 XP_005255313 16 7355 XP_005255312 16 7355 XP_006721101 16 7355 XP_005255311 16 7355 XP_005255310 16 7355 XP_006718498 16 7355 XP_005273831 16 7355 XP_005273830 16 7355 XP_005273828 16 7355 XP_006718495 16 7355 XP_005273827 16 7355 XP_005273826 16 7355 XP_005273825 16 7355 XP_005273824 16 7355 XP_005273823 16 7355 XP_005273822 16 7355 XP_005252063 16 7355 XP_006717183 16 7355 XP_005252061 16 7355 XP_005252060 16 7355 XP_005252058 16 7355 XP_005249289 16 7355 XP_005245470 16 7355 XP_005270973 16 7355 XP_005270971 16 7355 XP_005270970 16 7355 NP_006212 15 9605 NP_008958 15 9605 NP_861420 15 9605 NP_005516 15 9605 NP_001193670 15 9605 NP_065769 15 9605 NP_057683 15 9605 NP_001165405 15 9605 NP_001165404 15 9605 NP_071407 15 9605 XP_006718005 15 9605 XP_006718004 15 9605 XP_006718003 15 9605 XP_006714297 15 9605 XP_006713226 15 9605 XP_005265216 15 9605 XP_005265215 15 9605 XP_005265214 15 9605 XP_005275746 15 9605 XP_003403671 15 9605 XP_006710003 15 9605>NP_001180451 Length = 1223 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSHIS AS Sbjct: 451 TLSHISEAS 459>NP_001180453 Length = 1233 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSHIS AS Sbjct: 461 TLSHISEAS 469>NP_001180452 Length = 1239 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSHIS AS Sbjct: 467 TLSHISEAS 475>NP_078795 Length = 1219 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSHIS AS Sbjct: 447 TLSHISEAS 455>XP_006721333 Length = 1238 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSHIS AS Sbjct: 467 TLSHISEAS 475>XP_006721332 Length = 1239 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSHIS AS Sbjct: 467 TLSHISEAS 475>NP_005179 Length = 906 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLS ISNAS Sbjct: 789 TLSDISNAS 797>NP_001230352 Length = 70 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TLSHISNAS 9 T++HISN+S Sbjct: 52 TVAHISNSS 60>NP_004360 Length = 3177 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 LSHISN S Sbjct: 103 LSHISNMS 110>XP_005246122 Length = 2977 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 LSHISN S Sbjct: 103 LSHISNMS 110>XP_006712316 Length = 3010 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 LSHISN S Sbjct: 103 LSHISNMS 110>NP_065194 Length = 1819 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 T H+SNAS Sbjct: 1079 THGHVSNAS 1087Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 T H+SNAS Sbjct: 1133 THGHVSNAS 1141Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 HISNAS 9 H+SNAS Sbjct: 1109 HVSNAS 1114>NP_055742 Length = 1034 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLSH NAS Sbjct: 87 TLSHKLNAS 95>NP_001162118 Length = 1004 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLSH NAS Sbjct: 87 TLSHKLNAS 95>NP_001162119 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLSH NAS Sbjct: 87 TLSHKLNAS 95>NP_001162120 Length = 849 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLSH NAS Sbjct: 87 TLSHKLNAS 95>XP_005274526 Length = 868 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLSH NAS Sbjct: 87 TLSHKLNAS 95>XP_005274525 Length = 985 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLSH NAS Sbjct: 87 TLSHKLNAS 95>NP_001018075 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSHISNAS 9 L HISN S Sbjct: 497 LHHISNGS 504>NP_006171 Length = 838 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSHISNAS 9 L HISN S Sbjct: 497 LHHISNGS 504>NP_001018074 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSHISNAS 9 L HISN S Sbjct: 481 LHHISNGS 488>NP_001018076 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSHISNAS 9 L HISN S Sbjct: 481 LHHISNGS 488>NP_569079 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 LSH SN+S Sbjct: 385 LSHSSNSS 392>NP_064520 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 LSH SN+S Sbjct: 410 LSHSSNSS 417>NP_009143 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SHISNAS 9 SH SNAS Sbjct: 177 SHCSNAS 183>NP_055309 Length = 1962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLSHISN 7 +LSH+SN Sbjct: 503 SLSHLSN 509>NP_110445 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLSHISNA 8 TLSHI A Sbjct: 165 TLSHIQEA 172>NP_001257309 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 450 TLSHLSDTT 458>NP_892014 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 537 TLSHLSDTT 545>NP_001257310 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 262 TLSHLSDTT 270>XP_006722977 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLSHISNA 8 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_005260143 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLSHISNA 8 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_005260145 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLSHISNA 8 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_005260142 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLSHISNA 8 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_005260144 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLSHISNA 8 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_006721103 Length = 1597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLSHISN 7 +LSH+SN Sbjct: 471 SLSHLSN 477>XP_005255314 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLSHISN 7 +LSH+SN Sbjct: 250 SLSHLSN 256>XP_006721102 Length = 1820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLSHISN 7 +LSH+SN Sbjct: 361 SLSHLSN 367>XP_005255313 Length = 1822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLSHISN 7 +LSH+SN Sbjct: 471 SLSHLSN 477>XP_005255312 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLSHISN 7 +LSH+SN Sbjct: 471 SLSHLSN 477>XP_006721101 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLSHISN 7 +LSH+SN Sbjct: 471 SLSHLSN 477>XP_005255311 Length = 1913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLSHISN 7 +LSH+SN Sbjct: 503 SLSHLSN 509>XP_005255310 Length = 1919 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLSHISN 7 +LSH+SN Sbjct: 471 SLSHLSN 477>XP_006718498 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 133 TLSHLSDTT 141>XP_005273831 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 160 TLSHLSDTT 168>XP_005273830 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 304 TLSHLSDTT 312>XP_005273828 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 304 TLSHLSDTT 312>XP_006718495 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 458 TLSHLSDTT 466>XP_005273827 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 304 TLSHLSDTT 312>XP_005273826 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 433 TLSHLSDTT 441>XP_005273825 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 545 TLSHLSDTT 553>XP_005273824 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 458 TLSHLSDTT 466>XP_005273823 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 503 TLSHLSDTT 511>XP_005273822 Length = 800 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSHISNAS 9 TLSH+S+ + Sbjct: 545 TLSHLSDTT 553>XP_005252063 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSHISNAS 9 L HISN S Sbjct: 497 LHHISNGS 504>XP_006717183 Length = 554 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSHISNAS 9 L HISN S Sbjct: 497 LHHISNGS 504>XP_005252061 Length = 838 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSHISNAS 9 L HISN S Sbjct: 497 LHHISNGS 504>XP_005252060 Length = 838 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSHISNAS 9 L HISN S Sbjct: 497 LHHISNGS 504>XP_005252058 Length = 838 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSHISNAS 9 L HISN S Sbjct: 497 LHHISNGS 504>XP_005249289 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 LSH SN+S Sbjct: 410 LSHSSNSS 417>XP_005245470 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SHISNAS 9 SH SNAS Sbjct: 128 SHCSNAS 134>XP_005270973 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 +SHISN + Sbjct: 312 ISHISNTT 319>XP_005270971 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 +SHISN + Sbjct: 357 ISHISNTT 364>XP_005270970 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 +SHISN + Sbjct: 382 ISHISNTT 389>NP_006212 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHISNAS 9 +HI+NAS Sbjct: 26 NHITNAS 32>NP_008958 Length = 1522 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLS +SN S Sbjct: 310 TLSDVSNIS 318>NP_861420 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 L+HI+N S Sbjct: 118 LNHITNTS 125>NP_005516 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 L+HI+N S Sbjct: 118 LNHITNTS 125>NP_001193670 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 L+HI+N S Sbjct: 118 LNHITNTS 125>NP_065769 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLSHISN 7 TLSH+S+ Sbjct: 74 TLSHLSS 80>NP_057683 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LSHISN 7 LSH+SN Sbjct: 47 LSHLSN 52>NP_001165405 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLS I NAS Sbjct: 17 TLSVIDNAS 25>NP_001165404 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLS I NAS Sbjct: 17 TLSVIDNAS 25>NP_071407 Length = 3354 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLS I NAS Sbjct: 2257 TLSVIDNAS 2265>XP_006718005 Length = 3397 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLS I NAS Sbjct: 2300 TLSVIDNAS 2308>XP_006718004 Length = 3399 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLS I NAS Sbjct: 2302 TLSVIDNAS 2310>XP_006718003 Length = 3419 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLS I NAS Sbjct: 2322 TLSVIDNAS 2330>XP_006714297 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LSHISN 7 LSH+SN Sbjct: 47 LSHLSN 52>XP_006713226 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 L+H SN+S Sbjct: 398 LAHFSNSS 405>XP_005265216 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 L+H SN+S Sbjct: 398 LAHFSNSS 405>XP_005265215 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 L+H SN+S Sbjct: 398 LAHFSNSS 405>XP_005265214 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSHISNAS 9 L+H SN+S Sbjct: 398 LAHFSNSS 405>XP_005275746 Length = 3352 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLS I NAS Sbjct: 2255 TLSVIDNAS 2263>XP_003403671 Length = 3354 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLS I NAS Sbjct: 2257 TLSVIDNAS 2265>XP_006710003 Length = 3374 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLSHISNAS 9 TLS I NAS Sbjct: 2277 TLSVIDNAS 2285Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.105 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 548,141 Number of extensions: 822 Number of successful extensions: 87 Number of sequences better than 10000.0: 85 Number of HSP's gapped: 87 Number of HSP's successfully gapped: 87 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |