Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_689540 17 3301 XP_006720086 17 3301 XP_006720085 17 3301 XP_006720084 17 3301 NP_055815 16 5631 NP_009202 16 5631 NP_055524 16 5631 NP_001087197 16 5631 NP_001248750 16 5631 NP_001248749 16 5631 NP_001248748 16 5631 NP_001248747 16 5631 NP_001248746 16 5631 NP_061149 16 5631 XP_005253400 16 5631 XP_006719122 16 5631 XP_005253399 16 5631 XP_006719121 16 5631 XP_005249396 16 5631 XP_006715236 16 5631 XP_005249395 16 5631 XP_005249394 16 5631 XP_006715235 16 5631 XP_006715053 16 5631 XP_006715052 16 5631 XP_006715051 16 5631 XP_005248896 16 5631 NP_001009959 16 7355 NP_065762 16 7355 NP_001139669 16 7355 NP_006428 15 9605 NP_665682 15 9605 NP_001188410 15 9605 NP_115912 15 9605 NP_001188411 15 9605 NP_001188409 15 9605 XP_005246325 15 9605 XP_006712295 15 9605 XP_006712294 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSEEVSQF 9 TLSEE+SQF Sbjct: 2035 TLSEEMSQF 2043>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSEEVSQF 9 TLSEE+SQF Sbjct: 2035 TLSEEMSQF 2043>NP_689540 Length = 723 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSEEVSQF 9 LSEEVS F Sbjct: 136 LSEEVSHF 143>XP_006720086 Length = 703 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSEEVSQF 9 LSEEVS F Sbjct: 136 LSEEVSHF 143>XP_006720085 Length = 704 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSEEVSQF 9 LSEEVS F Sbjct: 136 LSEEVSHF 143>XP_006720084 Length = 730 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSEEVSQF 9 LSEEVS F Sbjct: 136 LSEEVSHF 143>NP_055815 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE +QF Sbjct: 184 TLTEEETQF 192>NP_009202 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE +QF Sbjct: 183 TLTEEETQF 191>NP_055524 Length = 3546 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE S+F Sbjct: 3460 TLAEEESEF 3468>NP_001087197 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 392 TVSEQVSQ 399>NP_001248750 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 316 TVSEQVSQ 323>NP_001248749 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 316 TVSEQVSQ 323>NP_001248748 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 341 TVSEQVSQ 348>NP_001248747 Length = 470 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 346 TVSEQVSQ 353>NP_001248746 Length = 511 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 387 TVSEQVSQ 394>NP_061149 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 317 TVSEQVSQ 324>XP_005253400 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE +QF Sbjct: 184 TLTEEETQF 192>XP_006719122 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE +QF Sbjct: 132 TLTEEETQF 140>XP_005253399 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE +QF Sbjct: 143 TLTEEETQF 151>XP_006719121 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE +QF Sbjct: 184 TLTEEETQF 192>XP_005249396 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 238 TVSEQVSQ 245>XP_006715236 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 316 TVSEQVSQ 323>XP_005249395 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 316 TVSEQVSQ 323>XP_005249394 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 317 TVSEQVSQ 324>XP_006715235 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLSEEVSQ 8 T+SE+VSQ Sbjct: 495 TVSEQVSQ 502>XP_006715053 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE +QF Sbjct: 183 TLTEEETQF 191>XP_006715052 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE +QF Sbjct: 183 TLTEEETQF 191>XP_006715051 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE +QF Sbjct: 183 TLTEEETQF 191>XP_005248896 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 TL+EE +QF Sbjct: 183 TLTEEETQF 191>NP_001009959 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EEVSQF 9 EEVSQF Sbjct: 224 EEVSQF 229>NP_065762 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EEVSQF 9 EEVSQF Sbjct: 211 EEVSQF 216>NP_001139669 Length = 7081 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TLSEEVSQF 9 ++SE++SQ+ Sbjct: 2924 SISEDISQY 2932>NP_006428 Length = 1724 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLSEEVS 7 TLS+EVS Sbjct: 258 TLSQEVS 264>NP_665682 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 ++SE VS+F Sbjct: 491 SMSESVSEF 499>NP_001188410 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 ++SE VS+F Sbjct: 456 SMSESVSEF 464>NP_115912 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 ++SE VS+F Sbjct: 487 SMSESVSEF 495>NP_001188411 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 ++SE VS+F Sbjct: 451 SMSESVSEF 459>NP_001188409 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 ++SE VS+F Sbjct: 512 SMSESVSEF 520>XP_005246325 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 ++SE VS+F Sbjct: 420 SMSESVSEF 428>XP_006712295 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 ++SE VS+F Sbjct: 476 SMSESVSEF 484>XP_006712294 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSEEVSQF 9 ++SE VS+F Sbjct: 481 SMSESVSEF 489Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.115 0.264 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,025 Number of extensions: 843 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |