Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 18 1482 NP_001263407 18 1935 NP_004959 18 1935 NP_001129492 18 1935 NP_071682 18 1935 XP_006715784 18 1935 XP_006715783 18 1935 XP_005249793 18 1935 XP_005249792 18 1935 XP_006715782 18 1935 XP_006715781 18 1935 XP_006715780 18 1935 NP_001019554 17 4312 NP_055718 17 4312 XP_006719740 17 4312 XP_006719739 17 4312 XP_006719738 17 4312 XP_005269272 17 4312 NP_783864 16 5631 NP_003696 16 5631 NP_002363 16 5631 NP_569157 16 5631 NP_689778 16 5631 NP_001116836 16 5631 XP_006714679 16 5631 XP_005262701 16 5631 XP_005246980 16 5631 NP_115813 16 7355 NP_001036011 16 7355 NP_073582 16 7355 NP_001230657 16 7355 NP_001028255 16 7355 NP_071412 16 7355 XP_005254968 16 7355 XP_005254967 16 7355 XP_006720570 16 7355 XP_005270086 16 7355 XP_005270085 16 7355 XP_005252695 16 7355 XP_005271331 16 7355 XP_006711040 16 7355 XP_006711039 16 7355 NP_006014 16 7355 NP_001013716 16 7355 NP_006113 16 7355 NP_001277156 15 9605 NP_001274509 15 9605 NP_001243690 15 9605 NP_001243689 15 9605 NP_000859 15 9605 NP_001120843 15 9605 NP_071411 15 9605 NP_061189 15 9605 XP_006714673 15 9605>NP_005179 Length = 906 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLSDIFNAS 9 TLSDI NAS Sbjct: 789 TLSDISNAS 797>NP_001263407 Length = 482 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 375 LSEIFNAS 382>NP_004959 Length = 483 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 376 LSEIFNAS 383>NP_001129492 Length = 483 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 376 LSEIFNAS 383>NP_071682 Length = 483 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 376 LSEIFNAS 383>XP_006715784 Length = 274 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 167 LSEIFNAS 174>XP_006715783 Length = 482 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 375 LSEIFNAS 382>XP_005249793 Length = 482 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 375 LSEIFNAS 382>XP_005249792 Length = 482 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 375 LSEIFNAS 382>XP_006715782 Length = 483 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 376 LSEIFNAS 383>XP_006715781 Length = 483 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 376 LSEIFNAS 383>XP_006715780 Length = 483 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 LS+IFNAS Sbjct: 376 LSEIFNAS 383>NP_001019554 Length = 2385 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLSDIFN 7 +LSDIFN Sbjct: 2133 SLSDIFN 2139>NP_055718 Length = 2363 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLSDIFN 7 +LSDIFN Sbjct: 2111 SLSDIFN 2117>XP_006719740 Length = 1863 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLSDIFN 7 +LSDIFN Sbjct: 1611 SLSDIFN 1617>XP_006719739 Length = 2306 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLSDIFN 7 +LSDIFN Sbjct: 2054 SLSDIFN 2060>XP_006719738 Length = 2340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLSDIFN 7 +LSDIFN Sbjct: 2088 SLSDIFN 2094>XP_005269272 Length = 2356 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLSDIFN 7 +LSDIFN Sbjct: 2104 SLSDIFN 2110>NP_783864 Length = 1044 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSDIFNAS 9 LSDI+N S Sbjct: 697 LSDIYNRS 704>NP_003696 Length = 678 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 L+D++NAS Sbjct: 274 LADLYNAS 281>NP_002363 Length = 1144 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLSDIFNA 8 TLSD F+A Sbjct: 463 TLSDFFDA 470>NP_569157 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SDIFNAS 9 SDIFN S Sbjct: 52 SDIFNTS 58>NP_689778 Length = 350 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLSDIFNA 8 T SD+FNA Sbjct: 146 TPSDLFNA 153>NP_001116836 Length = 366 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DIFNAS 9 DIFNAS Sbjct: 348 DIFNAS 353>XP_006714679 Length = 662 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLSDIFNA 8 TLSD F+A Sbjct: 463 TLSDFFDA 470>XP_005262701 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSDIFNAS 9 LSDI+N S Sbjct: 688 LSDIYNRS 695>XP_005246980 Length = 661 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSDIFNAS 9 L+D++NAS Sbjct: 257 LADLYNAS 264>NP_115813 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLSDIF 6 TLSDIF Sbjct: 407 TLSDIF 412>NP_001036011 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TLSDIFN 7 TLS IFN Sbjct: 166 TLSSIFN 172>NP_073582 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TLSDIFN 7 TLS IFN Sbjct: 166 TLSSIFN 172>NP_001230657 Length = 240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TLSDIFN 7 TLS IFN Sbjct: 55 TLSSIFN 61>NP_001028255 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSDIFNAS 9 LSD++N S Sbjct: 165 LSDVYNRS 172>NP_071412 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSDIFNAS 9 LSD++N S Sbjct: 165 LSDVYNRS 172>XP_005254968 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLSDIFNA 8 TLSD F+A Sbjct: 463 TLSDYFDA 470>XP_005254967 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLSDIFNA 8 TLSD F+A Sbjct: 463 TLSDYFDA 470>XP_006720570 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLSDIFNA 8 TLSD F+A Sbjct: 463 TLSDYFDA 470>XP_005270086 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSDIFNAS 9 LSD++N S Sbjct: 165 LSDVYNRS 172>XP_005270085 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSDIFNAS 9 LSD++N S Sbjct: 165 LSDVYNRS 172>XP_005252695 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLSDIF 6 TLSDIF Sbjct: 94 TLSDIF 99>XP_005271331 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLSDIF 6 TLSDIF Sbjct: 407 TLSDIF 412>XP_006711040 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLSDIF 6 TLSDIF Sbjct: 407 TLSDIF 412>XP_006711039 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLSDIF 6 TLSDIF Sbjct: 420 TLSDIF 425>NP_006014 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLSDIF 6 TLSDIF Sbjct: 126 TLSDIF 131>NP_001013716 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLSDIF 6 TLSDIF Sbjct: 103 TLSDIF 108>NP_006113 Length = 1150 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLSDIFNA 8 TLSD F+A Sbjct: 463 TLSDYFDA 470>NP_001277156 Length = 2362 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSDIFNAS 9 TLSD+F S Sbjct: 835 TLSDMFAVS 843>NP_001274509 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLSDIF 6 TLSD+F Sbjct: 124 TLSDVF 129>NP_001243690 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSDIFNAS 9 ++DIFN S Sbjct: 34 VTDIFNTS 41>NP_001243689 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSDIFNAS 9 ++DIFN S Sbjct: 34 VTDIFNTS 41>NP_000859 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSDIFNAS 9 ++DIFN S Sbjct: 34 VTDIFNTS 41>NP_001120843 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSDIFNA 8 ++DIFNA Sbjct: 13 VADIFNA 19>NP_071411 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLSDIF 6 TLSD+F Sbjct: 191 TLSDVF 196>NP_061189 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSDIFNA 8 ++DIFNA Sbjct: 13 VADIFNA 19>XP_006714673 Length = 2362 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSDIFNAS 9 TLSD+F S Sbjct: 835 TLSDMFAVS 843Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.125 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 400,885 Number of extensions: 585 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |