Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_001979 17 3301 NP_001003803 17 3301 XP_005267596 17 3301 XP_005267595 17 3301 XP_005267594 17 3301 NP_689938 17 4312 NP_001138667 17 4312 NP_001138573 17 4312 NP_001269662 17 4312 NP_001269663 17 4312 XP_006718727 17 4312 NP_009029 16 5631 NP_001826 16 5631 XP_006724391 16 5631 XP_005261338 16 5631 XP_005277858 16 5631 XP_006724390 16 5631 XP_006724389 16 5631 XP_005277857 16 5631 NP_005560 16 7355 NP_057952 16 7355 NP_001026971 16 7355 NP_078988 16 7355 NP_705833 16 7355 XP_005247174 16 7355 NP_002435 15 9605 NP_065080 15 9605 NP_006148 15 9605 NP_963845 15 9605 NP_001275643 15 9605 NP_001275642 15 9605 NP_570899 15 9605 NP_055809 15 9605 NP_001122080 15 9605 NP_001252540 15 9605 NP_001263308 15 9605 NP_057250 15 9605 NP_001005272 15 9605 NP_001263307 15 9605 NP_001103132 15 9605 NP_073605 15 9605 NP_071904 15 9605 NP_001188474 15 9605 XP_005262326 15 9605 XP_005254792 15 9605 XP_005254791 15 9605 XP_006720501 15 9605 XP_005266561 15 9605 XP_005266560 15 9605 XP_005266559 15 9605 XP_006718835 15 9605 XP_005273857 15 9605 XP_006718834 15 9605 XP_005273855 15 9605 XP_006713270 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLRISELEN 9 TLRISELE+ Sbjct: 2605 TLRISELES 2613>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLRISELEN 9 TLRISELE+ Sbjct: 2597 TLRISELES 2605>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLRISELEN 9 TLRISELE+ Sbjct: 2558 TLRISELES 2566>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLRISELEN 9 TLRISELE+ Sbjct: 2637 TLRISELES 2645>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLRISELEN 9 TLRISELE+ Sbjct: 2650 TLRISELES 2658>NP_001979 Length = 2033 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLRISELE 8 TLRI ELE Sbjct: 1443 TLRIQELE 1450>NP_001003803 Length = 215 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRISELEN 9 LR+S+LEN Sbjct: 143 LRLSQLEN 150>XP_005267596 Length = 178 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRISELEN 9 LR+S+LEN Sbjct: 143 LRLSQLEN 150>XP_005267595 Length = 200 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRISELEN 9 LR+S+LEN Sbjct: 128 LRLSQLEN 135>XP_005267594 Length = 200 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRISELEN 9 LR+S+LEN Sbjct: 128 LRLSQLEN 135>NP_689938 Length = 654 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLRISELE 8 TLR+SEL+ Sbjct: 246 TLRLSELD 253>NP_001138667 Length = 691 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLRISELE 8 TLR+SEL+ Sbjct: 246 TLRLSELD 253>NP_001138573 Length = 712 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRISELEN 9 LR+SELE+ Sbjct: 115 LRVSELES 122>NP_001269662 Length = 690 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLRISELE 8 TLR+SEL+ Sbjct: 246 TLRLSELD 253>NP_001269663 Length = 557 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TLRISELE 8 TLR+SEL+ Sbjct: 112 TLRLSELD 119>XP_006718727 Length = 712 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRISELEN 9 LR+SELE+ Sbjct: 115 LRVSELES 122>NP_009029 Length = 1640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 T R+SELE+ Sbjct: 1180 TSRVSELED 1188>NP_001826 Length = 1583 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 T R+SELE+ Sbjct: 1180 TSRVSELED 1188>XP_006724391 Length = 1567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 T R+SELE+ Sbjct: 1201 TSRVSELED 1209>XP_005261338 Length = 1570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 T R+SELE+ Sbjct: 1201 TSRVSELED 1209>XP_005277858 Length = 1604 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 T R+SELE+ Sbjct: 1201 TSRVSELED 1209>XP_006724390 Length = 1623 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 T R+SELE+ Sbjct: 1163 TSRVSELED 1171>XP_006724389 Length = 1653 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 T R+SELE+ Sbjct: 1201 TSRVSELED 1209>XP_005277857 Length = 1661 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 T R+SELE+ Sbjct: 1201 TSRVSELED 1209>NP_005560 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 TLR+ E+E+ Sbjct: 214 TLRVEEVED 222>NP_057952 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 TLR+ E+E+ Sbjct: 193 TLRVEEVED 201>NP_001026971 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 TLR+ E+E+ Sbjct: 193 TLRVEEVED 201>NP_078988 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRISELEN 9 LR+ ELEN Sbjct: 738 LRLLELEN 745>NP_705833 Length = 2970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 T+ +SE+EN Sbjct: 1684 TIALSEVEN 1692>XP_005247174 Length = 2679 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 T+ +SE+EN Sbjct: 1393 TIALSEVEN 1401>NP_002435 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLRISELE 8 T RIS+LE Sbjct: 425 TARISQLE 432>NP_065080 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ISELEN 9 ISELEN Sbjct: 102 ISELEN 107>NP_006148 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RISELEN 9 R+S+LEN Sbjct: 260 RLSQLEN 266>NP_963845 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RISELEN 9 R+S+LEN Sbjct: 260 RLSQLEN 266>NP_001275643 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RISELEN 9 R+S+LEN Sbjct: 203 RLSQLEN 209>NP_001275642 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RISELEN 9 R+S+LEN Sbjct: 288 RLSQLEN 294>NP_570899 Length = 956 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LRISELE 8 LRISE+E Sbjct: 80 LRISEVE 86>NP_055809 Length = 1508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 TLR+ EL++ Sbjct: 496 TLRVHELQS 504>NP_001122080 Length = 1514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 TLR+ EL++ Sbjct: 502 TLRVHELQS 510>NP_001252540 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 TLR+ EL++ Sbjct: 496 TLRVHELQS 504>NP_001263308 Length = 256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ISELEN 9 ISELEN Sbjct: 98 ISELEN 103>NP_057250 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLRISELE 8 +LR+SEL+ Sbjct: 13 SLRVSELQ 20>NP_001005272 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLRISELEN 9 TLR SE+ N Sbjct: 285 TLRNSEMRN 293>NP_001263307 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ISELEN 9 ISELEN Sbjct: 85 ISELEN 90>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 +LR+ EL+N Sbjct: 4113 SLRLRELQN 4121>NP_073605 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLRISEL 7 TL+ISEL Sbjct: 171 TLKISEL 177>NP_071904 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRISELEN 9 LR+SE+E+ Sbjct: 612 LRVSEVES 619>NP_001188474 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLRISEL 7 TL+ISEL Sbjct: 171 TLKISEL 177>XP_005262326 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLRISELE 8 T RIS+LE Sbjct: 426 TARISQLE 433>XP_005254792 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLRISELE 8 +LR+SEL+ Sbjct: 4 SLRVSELQ 11>XP_005254791 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLRISELE 8 +LR+SEL+ Sbjct: 6 SLRVSELQ 13>XP_006720501 Length = 1459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLRISELEN 9 TLR+ EL++ Sbjct: 447 TLRVHELQS 455>XP_005266561 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRISELEN 9 LR+SE+E+ Sbjct: 322 LRVSEVES 329>XP_005266560 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRISELEN 9 LR+SE+E+ Sbjct: 612 LRVSEVES 619>XP_005266559 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRISELEN 9 LR+SE+E+ Sbjct: 538 LRVSEVES 545>XP_006718835 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LRISELE 8 LRISE+E Sbjct: 109 LRISEVE 115>XP_005273857 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LRISELE 8 LRISE+E Sbjct: 30 LRISEVE 36>XP_006718834 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LRISELE 8 LRISE+E Sbjct: 102 LRISEVE 108>XP_005273855 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LRISELE 8 LRISE+E Sbjct: 109 LRISEVE 115>XP_006713270 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ISELEN 9 ISELEN Sbjct: 159 ISELEN 164Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.127 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,077 Number of extensions: 868 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |