Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155048 19 665 NP_056404 19 665 NP_001191195 17 4312 NP_001191196 17 4312 NP_000800 17 4312 NP_001123465 17 4312 NP_001070254 17 4312 XP_006718387 17 4312 XP_006718386 17 4312 XP_006714066 17 4312 XP_005264664 17 4312 XP_005264663 17 4312 XP_005264662 17 4312 NP_115895 17 4312 NP_004351 16 5631 NP_000799 16 5631 NP_872393 16 5631 XP_005274716 16 5631 XP_005251865 16 5631 XP_005251864 16 5631 XP_006712515 16 5631 XP_006712513 16 5631 XP_006712512 16 5631 XP_006712511 16 5631 XP_006712510 16 5631 XP_006712509 16 5631 XP_005246533 16 5631 XP_006712508 16 5631 NP_115893 16 5631 NP_055745 16 5631 NP_031377 16 7355 XP_005262913 16 7355 NP_001273659 15 9605 NP_061869 15 9605 NP_001136112 15 9605 NP_112092 15 9605 NP_536856 15 9605 NP_663612 15 9605 XP_006724281 15 9605 XP_006724280 15 9605 XP_006722063 15 9605 XP_006722062 15 9605 XP_006722061 15 9605 XP_006722060 15 9605 XP_005257605 15 9605 XP_005257604 15 9605 XP_006722059 15 9605 XP_005251914 15 9605 XP_006717092 15 9605 XP_006717091 15 9605 XP_005251912 15 9605 XP_006717090 15 9605>NP_001155048 Length = 630 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 T+NT+GT+T Sbjct: 228 TINTIGTST 236>NP_056404 Length = 718 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 T+NT+GT+T Sbjct: 228 TINTIGTST 236>NP_001191195 Length = 535 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLNTVGTT 8 T+NT+G T Sbjct: 470 TVNTIGAT 477>NP_001191196 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLNTVGTT 8 T+NT+G T Sbjct: 419 TVNTIGAT 426>NP_000800 Length = 554 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLNTVGTT 8 T+NT+G T Sbjct: 489 TVNTIGAT 496>NP_001123465 Length = 718 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLNTVGT 7 +LNTVGT Sbjct: 429 SLNTVGT 435>NP_001070254 Length = 1735 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT GT T Sbjct: 1274 TANTTGTAT 1282>XP_006718387 Length = 1798 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT GT T Sbjct: 1337 TANTTGTAT 1345>XP_006718386 Length = 1822 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT GT T Sbjct: 1337 TANTTGTAT 1345>XP_006714066 Length = 544 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLNTVGTT 8 T+NT+G T Sbjct: 479 TVNTIGAT 486>XP_005264664 Length = 572 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLNTVGT 7 +LNTVGT Sbjct: 283 SLNTVGT 289>XP_005264663 Length = 707 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLNTVGT 7 +LNTVGT Sbjct: 429 SLNTVGT 435>XP_005264662 Length = 710 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLNTVGT 7 +LNTVGT Sbjct: 429 SLNTVGT 435>NP_115895 Length = 707 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLNTVGT 7 +LNTVGT Sbjct: 429 SLNTVGT 435>NP_004351 Length = 882 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 TLNTVG Sbjct: 115 TLNTVG 120>NP_000799 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLNTVGTT 8 T N VGTT Sbjct: 395 TFNIVGTT 402>NP_872393 Length = 3234 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 +++TVGT+T Sbjct: 2915 SISTVGTST 2923>XP_005274716 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLNTVGTT 8 T N VGTT Sbjct: 394 TFNIVGTT 401>XP_005251865 Length = 682 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 TLNTVG Sbjct: 13 TLNTVG 18>XP_005251864 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 TLNTVG Sbjct: 13 TLNTVG 18>XP_006712515 Length = 3232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 +++TVGT+T Sbjct: 2913 SISTVGTST 2921>XP_006712513 Length = 3220 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 +++TVGT+T Sbjct: 2882 SISTVGTST 2890>XP_006712512 Length = 3237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 +++TVGT+T Sbjct: 2918 SISTVGTST 2926>XP_006712511 Length = 3256 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 +++TVGT+T Sbjct: 2918 SISTVGTST 2926>XP_006712510 Length = 3305 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 +++TVGT+T Sbjct: 2986 SISTVGTST 2994>XP_006712509 Length = 3319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 +++TVGT+T Sbjct: 2981 SISTVGTST 2989>XP_005246533 Length = 3323 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 +++TVGT+T Sbjct: 2985 SISTVGTST 2993>XP_006712508 Length = 3324 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 +++TVGT+T Sbjct: 2986 SISTVGTST 2994>NP_115893 Length = 3258 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLNTVGTTT 9 +++TVGT+T Sbjct: 2920 SISTVGTST 2928>NP_055745 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 TLNTVG Sbjct: 13 TLNTVG 18>NP_031377 Length = 1228 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLNTVGTT 8 +LNTVG T Sbjct: 155 SLNTVGGT 162>XP_005262913 Length = 1193 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLNTVGTT 8 +LNTVG T Sbjct: 155 SLNTVGGT 162>NP_001273659 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 T+NTVG Sbjct: 531 TINTVG 536>NP_061869 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT TTT Sbjct: 757 TTNTTTTTT 765>NP_001136112 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT TTT Sbjct: 757 TTNTTTTTT 765>NP_112092 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTVGTTT 9 N+VGTT+ Sbjct: 121 NSVGTTS 127>NP_536856 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 T+NTVG Sbjct: 531 TINTVG 536>NP_663612 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTVGTTT 9 N+VGTT+ Sbjct: 121 NSVGTTS 127>XP_006724281 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTVGTTT 9 N+VGTT+ Sbjct: 121 NSVGTTS 127>XP_006724280 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTVGTTT 9 N+VGTT+ Sbjct: 199 NSVGTTS 205>XP_006722063 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT TTT Sbjct: 993 TTNTTTTTT 1001>XP_006722062 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT TTT Sbjct: 993 TTNTTTTTT 1001>XP_006722061 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT TTT Sbjct: 993 TTNTTTTTT 1001>XP_006722060 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT TTT Sbjct: 993 TTNTTTTTT 1001>XP_005257605 Length = 1926 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT TTT Sbjct: 993 TTNTTTTTT 1001>XP_005257604 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT TTT Sbjct: 993 TTNTTTTTT 1001>XP_006722059 Length = 1965 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TLNTVGTTT 9 T NT TTT Sbjct: 993 TTNTTTTTT 1001>XP_005251914 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 T+NTVG Sbjct: 498 TINTVG 503>XP_006717092 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 T+NTVG Sbjct: 549 TINTVG 554>XP_006717091 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 T+NTVG Sbjct: 549 TINTVG 554>XP_005251912 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 T+NTVG Sbjct: 531 TINTVG 536>XP_006717090 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLNTVG 6 T+NTVG Sbjct: 549 TINTVG 554Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.112 0.292 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 403,574 Number of extensions: 601 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |