Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 19 665 NP_115267 17 3301 NP_061746 17 3301 NP_001171809 16 5631 NP_001098713 16 5631 NP_065817 16 5631 NP_060127 16 5631 XP_005264437 16 5631 NP_982261 16 5631 NP_001002243 16 5631 NP_775885 16 7355 NP_001004060 16 7355 NP_001004067 16 7355 XP_006725258 16 7355 XP_005255375 16 7355 NP_115266 16 7355 NP_055102 16 7355 NP_061745 16 7355 NP_000073 15 9605 NP_004412 15 9605 NP_079150 15 9605 NP_115811 15 9605 NP_001007235 15 9605 NP_001007234 15 9605 NP_000364 15 9605 NP_002410 15 9605 NP_004457 15 9605 NP_236914 15 9605 NP_001074 15 9605 NP_775901 15 9605 NP_937791 15 9605 NP_246273 15 9605 XP_005266736 15 9605 XP_006722498 15 9605 XP_006722497 15 9605 XP_005269585 15 9605 XP_006710974 15 9605 XP_006710973 15 9605 XP_006710972 15 9605 XP_006710971 15 9605 XP_006710970 15 9605 XP_005244790 15 9605 XP_005244789 15 9605 XP_005244788 15 9605 NP_001017415 15 9605 NP_003359 15 9605 NP_001017416 15 9605>NP_004351 Length = 882 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLKVTDANA 9 TLKVTDA+A Sbjct: 395 TLKVTDADA 403>NP_115267 Length = 811 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKVTDAN 8 +KVTDAN Sbjct: 230 IKVTDAN 236>NP_061746 Length = 931 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKVTDAN 8 +KVTDAN Sbjct: 230 IKVTDAN 236>NP_001171809 Length = 1148 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLKVTDAN 8 ++KVTD+N Sbjct: 225 SIKVTDSN 232>NP_001098713 Length = 1101 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLKVTDAN 8 ++KVTD+N Sbjct: 225 SIKVTDSN 232>NP_065817 Length = 1100 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLKVTDAN 8 ++KVTD+N Sbjct: 225 SIKVTDSN 232>NP_060127 Length = 909 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLKVTDANA 9 +LKVTDA A Sbjct: 838 SLKVTDAFA 846>XP_005264437 Length = 937 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLKVTDANA 9 +LKVTDA A Sbjct: 866 SLKVTDAFA 874>NP_982261 Length = 936 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLKVTDANA 9 +LKVTDA A Sbjct: 866 SLKVTDAFA 874>NP_001002243 Length = 908 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLKVTDANA 9 +LKVTDA A Sbjct: 838 SLKVTDAFA 846>NP_775885 Length = 1222 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLKVTDANA 9 T++VT++NA Sbjct: 198 TVRVTNSNA 206>NP_001004060 Length = 1267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLKVTDANA 9 T++VT++NA Sbjct: 198 TVRVTNSNA 206>NP_001004067 Length = 1222 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLKVTDANA 9 T++VT++NA Sbjct: 198 TVRVTNSNA 206>XP_006725258 Length = 1267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLKVTDANA 9 T++VT++NA Sbjct: 198 TVRVTNSNA 206>XP_005255375 Length = 1267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLKVTDANA 9 T++VT++NA Sbjct: 198 TVRVTNSNA 206>NP_115266 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LKVTDAN 8 ++VTDAN Sbjct: 227 IRVTDAN 233>NP_055102 Length = 1222 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLKVTDANA 9 T++VT++NA Sbjct: 198 TVRVTNSNA 206>NP_061745 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LKVTDAN 8 ++VTDAN Sbjct: 227 IRVTDAN 233>NP_000073 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLKVTDAN 8 TLKV D N Sbjct: 123 TLKVWDTN 130>NP_004412 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKVTDANA 9 LK+T ANA Sbjct: 412 LKITIANA 419>NP_079150 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 764 LKVTDA 769>NP_115811 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLKVTD 6 TLK+TD Sbjct: 284 TLKITD 289>NP_001007235 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLKVTDAN 8 TLKV D N Sbjct: 123 TLKVWDTN 130>NP_001007234 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLKVTDAN 8 TLKV D N Sbjct: 65 TLKVWDTN 72>NP_000364 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 144 LKVTDA 149>NP_002410 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLKVTD 6 TLK+TD Sbjct: 262 TLKITD 267>NP_004457 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLKVTD 6 TLK+TD Sbjct: 515 TLKITD 520>NP_236914 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLKVTD 6 TLK+TD Sbjct: 511 TLKITD 516>NP_001074 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLKVTD 6 TLK+TD Sbjct: 553 TLKITD 558>NP_775901 Length = 2226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 1249 LKVTDA 1254>NP_937791 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLKVTD 6 TLK+TD Sbjct: 143 TLKITD 148>NP_246273 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLKVTD 6 TLK+TD Sbjct: 501 TLKITD 506>XP_005266736 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 337 LKVTDA 342>XP_006722498 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 1250 LKVTDA 1255>XP_006722497 Length = 2227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 1250 LKVTDA 1255>XP_005269585 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLKVTD 6 TLK+TD Sbjct: 143 TLKITD 148>XP_006710974 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 406 LKVTDA 411>XP_006710973 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 406 LKVTDA 411>XP_006710972 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 764 LKVTDA 769>XP_006710971 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 764 LKVTDA 769>XP_006710970 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKVTDA 7 LKVTDA Sbjct: 764 LKVTDA 769>XP_005244790 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKVTDANA 9 LK+T ANA Sbjct: 412 LKITIANA 419>XP_005244789 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKVTDANA 9 LK+T ANA Sbjct: 437 LKITIANA 444>XP_005244788 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKVTDANA 9 LK+T ANA Sbjct: 437 LKITIANA 444>NP_001017415 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLKVTDANA 9 ++KVTD N+ Sbjct: 597 SVKVTDLNS 605>NP_003359 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLKVTDANA 9 ++KVTD N+ Sbjct: 597 SVKVTDLNS 605>NP_001017416 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLKVTDANA 9 ++KVTD N+ Sbjct: 597 SVKVTDLNS 605Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.113 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 376,235 Number of extensions: 613 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |