Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 20 390 NP_055192 18 1482 NP_001123359 18 1482 NP_689718 17 3301 XP_006724036 17 3301 XP_006724035 17 3301 XP_006724034 17 3301 XP_006724033 17 3301 XP_006724032 17 3301 XP_006724031 17 3301 XP_005260983 17 3301 XP_006724030 17 3301 NP_001164102 17 4312 XP_005255101 17 4312 XP_005273343 17 4312 NP_150296 17 4312 NP_001268421 16 5631 NP_004509 16 5631 NP_000525 16 5631 NP_742106 16 5631 NP_001121615 16 5631 NP_001121616 16 5631 NP_000170 16 5631 NP_742105 16 5631 NP_742104 16 5631 NP_001268422 16 5631 NP_001268423 16 5631 NP_005637 16 5631 NP_059982 16 5631 NP_974487 16 5631 XP_006723855 16 5631 XP_006723854 16 5631 XP_006723853 16 5631 XP_006723852 16 5631 XP_006723851 16 5631 XP_006723850 16 5631 XP_005246706 16 5631 XP_005246704 16 5631 XP_005264328 16 5631 XP_006711875 16 5631 XP_005273291 16 5631 NP_694985 16 7355 NP_006738 16 7355 NP_079172 16 7355 NP_937872 16 7355 NP_060380 16 7355 XP_005274246 16 7355 XP_005251644 16 7355 XP_006713969 16 7355 XP_006713968 16 7355 XP_005264451 16 7355 XP_006712100 16 7355 XP_005264450 16 7355 NP_002917 16 7355 NP_079033 15 9605 NP_001138999 15 9605 NP_055655 15 9605 NP_003122 15 9605 NP_060538 15 9605 NP_001129193 15 9605 NP_006178 15 9605 NP_112214 15 9605 XP_005253946 15 9605 XP_006717353 15 9605 XP_005266168 15 9605 XP_006717352 15 9605 XP_005266166 15 9605 XP_005266167 15 9605 XP_005266165 15 9605 XP_005266164 15 9605 XP_006717351 15 9605 XP_005266163 15 9605 XP_005266162 15 9605 XP_006717202 15 9605 XP_005273608 15 9605 XP_005273607 15 9605 XP_006715718 15 9605>NP_003290 Length = 803 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLGRGTAIT 9 TLGRGT IT Sbjct: 240 TLGRGTTIT 248>NP_055192 Length = 621 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GRGTAIT 9 GRGTAIT Sbjct: 10 GRGTAIT 16>NP_001123359 Length = 568 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GRGTAIT 9 GRGTAIT Sbjct: 10 GRGTAIT 16>NP_689718 Length = 670 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 505 TLGKGTA 511>XP_006724036 Length = 540 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 375 TLGKGTA 381>XP_006724035 Length = 540 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 375 TLGKGTA 381>XP_006724034 Length = 624 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 459 TLGKGTA 465>XP_006724033 Length = 670 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 505 TLGKGTA 511>XP_006724032 Length = 670 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 505 TLGKGTA 511>XP_006724031 Length = 670 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 505 TLGKGTA 511>XP_005260983 Length = 670 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 505 TLGKGTA 511>XP_006724030 Length = 670 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 505 TLGKGTA 511>NP_001164102 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 255 TLGQGTA 261>XP_005255101 Length = 922 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG GTA T Sbjct: 427 TLGSGTAET 435>XP_005273343 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLG+GTA Sbjct: 255 TLGQGTA 261>NP_150296 Length = 974 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG GTA T Sbjct: 427 TLGSGTAET 435>NP_001268421 Length = 1230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LGRGTA 7 LGRGTA Sbjct: 1085 LGRGTA 1090>NP_004509 Length = 844 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 +GRG AIT Sbjct: 565 VGRGPAIT 572>NP_000525 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 LG+GT +T Sbjct: 137 LGQGTTVT 144>NP_742106 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 +GRG AIT Sbjct: 562 VGRGPAIT 569>NP_001121615 Length = 893 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 LG+GT +T Sbjct: 137 LGQGTTVT 144>NP_001121616 Length = 770 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 LG+GT +T Sbjct: 137 LGQGTTVT 144>NP_000170 Length = 1360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LGRGTA 7 LGRGTA Sbjct: 1215 LGRGTA 1220>NP_742105 Length = 872 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 +GRG AIT Sbjct: 593 VGRGPAIT 600>NP_742104 Length = 854 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 +GRG AIT Sbjct: 575 VGRGPAIT 582>NP_001268422 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LGRGTA 7 LGRGTA Sbjct: 913 LGRGTA 918>NP_001268423 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LGRGTA 7 LGRGTA Sbjct: 913 LGRGTA 918>NP_005637 Length = 1621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLGRGTAI 8 +LGRGT++ Sbjct: 564 SLGRGTSL 571>NP_059982 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLGRGTAI 8 TLG+GT + Sbjct: 57 TLGKGTEV 64>NP_974487 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLGRGTAI 8 TLG+GT + Sbjct: 78 TLGKGTEV 85>XP_006723855 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 +GRG AIT Sbjct: 577 VGRGPAIT 584>XP_006723854 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 +GRG AIT Sbjct: 579 VGRGPAIT 586>XP_006723853 Length = 868 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 +GRG AIT Sbjct: 589 VGRGPAIT 596>XP_006723852 Length = 876 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 +GRG AIT Sbjct: 597 VGRGPAIT 604>XP_006723851 Length = 885 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 +GRG AIT Sbjct: 606 VGRGPAIT 613>XP_006723850 Length = 886 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 +GRG AIT Sbjct: 607 VGRGPAIT 614>XP_005246706 Length = 891 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 LG+GT +T Sbjct: 137 LGQGTTVT 144>XP_005246704 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LGRGTAIT 9 LG+GT +T Sbjct: 137 LGQGTTVT 144>XP_005264328 Length = 1261 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LGRGTA 7 LGRGTA Sbjct: 1116 LGRGTA 1121>XP_006711875 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLGRGTAI 8 +LGRGT++ Sbjct: 108 SLGRGTSL 115>XP_005273291 Length = 1620 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLGRGTAI 8 +LGRGT++ Sbjct: 564 SLGRGTSL 571>NP_694985 Length = 1042 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GRGTAIT 9 GRG AIT Sbjct: 652 GRGEAIT 658>NP_006738 Length = 1042 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GRGTAIT 9 GRG AIT Sbjct: 652 GRGEAIT 658>NP_079172 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 +LG GT +T Sbjct: 816 SLGNGTPVT 824>NP_937872 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GRGTAIT 9 GRGT +T Sbjct: 632 GRGTGLT 638>NP_060380 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGTAIT 9 RGTAIT Sbjct: 225 RGTAIT 230>XP_005274246 Length = 1042 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GRGTAIT 9 GRG AIT Sbjct: 652 GRGEAIT 658>XP_005251644 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 +LG GT +T Sbjct: 694 SLGNGTPVT 702>XP_006713969 Length = 1157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GRGTAIT 9 GRGT +T Sbjct: 632 GRGTGLT 638>XP_006713968 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GRGTAIT 9 GRGT +T Sbjct: 632 GRGTGLT 638>XP_005264451 Length = 240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGTAIT 9 RGTAIT Sbjct: 225 RGTAIT 230>XP_006712100 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGTAIT 9 RGTAIT Sbjct: 225 RGTAIT 230>XP_005264450 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGTAIT 9 RGTAIT Sbjct: 225 RGTAIT 230>NP_002917 Length = 1376 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GRGTAIT 9 GRGT +T Sbjct: 632 GRGTGLT 638>NP_079033 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 178 TLGEGSADT 186>NP_001138999 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 178 TLGEGSADT 186>NP_055655 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLGRGT 6 TLG+GT Sbjct: 60 TLGKGT 65>NP_003122 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LGRGTAI 8 LGRG+A+ Sbjct: 12 LGRGSAL 18>NP_060538 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLGRG++ Sbjct: 143 TLGRGSS 149>NP_001129193 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLGRG++ Sbjct: 143 TLGRGSS 149>NP_006178 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GRGTAI 8 GRGTA+ Sbjct: 64 GRGTAL 69>NP_112214 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLGRGT 6 TLG+GT Sbjct: 58 TLGKGT 63>XP_005253946 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GRGTAI 8 GRGTA+ Sbjct: 64 GRGTAL 69>XP_006717353 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 178 TLGEGSADT 186>XP_005266168 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 178 TLGEGSADT 186>XP_006717352 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 178 TLGEGSADT 186>XP_005266166 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 147 TLGEGSADT 155>XP_005266167 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 147 TLGEGSADT 155>XP_005266165 Length = 1272 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 178 TLGEGSADT 186>XP_005266164 Length = 1291 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 178 TLGEGSADT 186>XP_006717351 Length = 1292 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 172 TLGEGSADT 180>XP_005266163 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 174 TLGEGSADT 182>XP_005266162 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLGRGTAIT 9 TLG G+A T Sbjct: 175 TLGEGSADT 183>XP_006717202 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 ++GRGTA Sbjct: 143 SVGRGTA 149>XP_005273608 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLGRG++ Sbjct: 143 TLGRGSS 149>XP_005273607 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLGRGTA 7 TLGRG++ Sbjct: 143 TLGRGSS 149>XP_006715718 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GRGTAIT 9 G GTA+T Sbjct: 181 GHGTALT 187Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.134 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 544,012 Number of extensions: 780 Number of successful extensions: 77 Number of sequences better than 10000.0: 77 Number of HSP's gapped: 77 Number of HSP's successfully gapped: 77 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |