Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 17 2528 NP_671714 17 2528 XP_006715890 17 2528 XP_005250160 17 2528 XP_005250159 17 2528 NP_001106677 17 4312 NP_055668 16 5631 XP_006721677 16 5631 XP_006721676 16 5631 NP_001091979 16 5631 NP_055495 16 7355 NP_065987 16 7355 NP_005039 16 7355 XP_006722261 16 7355 XP_005258130 16 7355 NP_001275635 15 9605 NP_001264156 15 9605 NP_003658 15 9605 NP_001264155 15 9605 NP_000868 15 9605 NP_055537 15 9605 NP_001273374 15 9605 XP_006715343 15 9605 XP_006715342 15 9605 XP_006715341 15 9605 XP_006715340 15 9605 XP_006715339 15 9605 XP_006715338 15 9605 XP_005263991 15 9605 XP_005263989 15 9605 XP_005263990 15 9605 XP_005263988 15 9605 XP_005263987 15 9605 XP_005263986 15 9605>NP_005742 Length = 3907 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLGISELES 9 TL ISELES Sbjct: 2605 TLRISELES 2613>NP_671714 Length = 3899 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLGISELES 9 TL ISELES Sbjct: 2597 TLRISELES 2605>XP_006715890 Length = 3860 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLGISELES 9 TL ISELES Sbjct: 2558 TLRISELES 2566>XP_005250160 Length = 3939 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLGISELES 9 TL ISELES Sbjct: 2637 TLRISELES 2645>XP_005250159 Length = 3952 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLGISELES 9 TL ISELES Sbjct: 2650 TLRISELES 2658>NP_001106677 Length = 74 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GISELES 9 G+SELES Sbjct: 3 GVSELES 9>NP_055668 Length = 1051 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLGISELE 8 TLG SELE Sbjct: 302 TLGDSELE 309>XP_006721677 Length = 1028 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLGISELE 8 TLG SELE Sbjct: 302 TLGDSELE 309>XP_006721676 Length = 1073 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLGISELE 8 TLG SELE Sbjct: 302 TLGDSELE 309>NP_001091979 Length = 1006 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TLGISELE 8 TLG SELE Sbjct: 302 TLGDSELE 309>NP_055495 Length = 2235 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LGISELE 8 LGI+ELE Sbjct: 1927 LGIAELE 1933>NP_065987 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LGISELE 8 LGIS+LE Sbjct: 591 LGISDLE 597>NP_005039 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LGISELES 9 +G+ ELES Sbjct: 205 IGVKELES 212>XP_006722261 Length = 2092 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LGISELE 8 LGI+ELE Sbjct: 1784 LGIAELE 1790>XP_005258130 Length = 2234 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LGISELE 8 LGI+ELE Sbjct: 1926 LGIAELE 1932>NP_001275635 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 L ISE+ES Sbjct: 296 LNISEIES 303>NP_001264156 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 LG+SEL S Sbjct: 55 LGLSELPS 62>NP_003658 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 LG+SEL S Sbjct: 55 LGLSELPS 62>NP_001264155 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 LG+SEL S Sbjct: 55 LGLSELPS 62>NP_000868 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 L ISE+ES Sbjct: 296 LNISEIES 303>NP_055537 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GISELES 9 G+S+LES Sbjct: 895 GVSDLES 901>NP_001273374 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GISELES 9 G+S+LES Sbjct: 874 GVSDLES 880>XP_006715343 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GISELES 9 G+S+LES Sbjct: 845 GVSDLES 851>XP_006715342 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GISELES 9 G+S+LES Sbjct: 845 GVSDLES 851>XP_006715341 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GISELES 9 G+S+LES Sbjct: 845 GVSDLES 851>XP_006715340 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GISELES 9 G+S+LES Sbjct: 845 GVSDLES 851>XP_006715339 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GISELES 9 G+S+LES Sbjct: 857 GVSDLES 863>XP_006715338 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GISELES 9 G+S+LES Sbjct: 879 GVSDLES 885>XP_005263991 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 L ISE+ES Sbjct: 296 LNISEIES 303>XP_005263989 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 L ISE+ES Sbjct: 296 LNISEIES 303>XP_005263990 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 L ISE+ES Sbjct: 296 LNISEIES 303>XP_005263988 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 L ISE+ES Sbjct: 296 LNISEIES 303>XP_005263987 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 L ISE+ES Sbjct: 296 LNISEIES 303>XP_005263986 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGISELES 9 L ISE+ES Sbjct: 296 LNISEIES 303Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.123 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 480,219 Number of extensions: 740 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |