Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1935 XP_005262424 18 1935 NP_001983 17 3301 NP_001167569 17 4312 NP_060814 17 4312 XP_006717973 17 4312 NP_001121084 16 5631 NP_003032 16 5631 NP_000271 16 5631 NP_001245394 16 5631 NP_001165405 16 5631 NP_001245393 16 5631 NP_001165404 16 5631 NP_071407 16 5631 NP_001245391 16 5631 NP_001245392 16 5631 NP_001595 16 5631 NP_817123 16 5631 XP_006721136 16 5631 XP_006721135 16 5631 XP_005253015 16 5631 XP_006718309 16 5631 XP_006718308 16 5631 XP_006718307 16 5631 XP_005253014 16 5631 XP_005253013 16 5631 XP_005253012 16 5631 XP_005253011 16 5631 XP_006718005 16 5631 XP_006718004 16 5631 XP_006718003 16 5631 XP_005275746 16 5631 XP_003403671 16 5631 XP_006710003 16 5631 NP_001127925 16 5631 NP_004516 16 7355 NP_001277251 16 7355 NP_005500 16 7355 NP_001277250 16 7355 XP_006714623 16 7355 XP_005271970 16 7355 XP_005271969 16 7355 XP_005271967 16 7355 XP_005271966 16 7355 XP_006712591 16 7355 XP_006712590 16 7355 XP_006712589 16 7355 NP_694996 15 9605 NP_001177793 15 9605 NP_055042 15 9605 NP_001265227 15 9605 NP_775922 15 9605 NP_068593 15 9605 XP_006726589 15 9605 XP_006724371 15 9605 XP_006718462 15 9605 XP_006710010 15 9605>NP_722576 Length = 3080 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLFSTSVYT 9 TLFSTSV T Sbjct: 1127 TLFSTSVDT 1135>XP_005262424 Length = 2875 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLFSTSVYT 9 TLFSTSV T Sbjct: 922 TLFSTSVDT 930>NP_001983 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLF SVYT Sbjct: 102 TLFVPSVYT 110>NP_001167569 Length = 258 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLFSTSVY 8 T+FS+S+Y Sbjct: 180 TVFSSSIY 187>NP_060814 Length = 475 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLFSTSVY 8 T+FS+S+Y Sbjct: 180 TVFSSSIY 187>XP_006717973 Length = 397 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLFSTSVY 8 T+FS+S+Y Sbjct: 102 TVFSSSIY 109>NP_001121084 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 291 FSTSVY 296>NP_003032 Length = 672 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLF+ +YT Sbjct: 403 TLFTMDIYT 411>NP_000271 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 291 FSTSVY 296>NP_001245394 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 291 FSTSVY 296>NP_001165405 Length = 1079 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 274 FSTSVY 279>NP_001245393 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 291 FSTSVY 296>NP_001165404 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 274 FSTSVY 279>NP_071407 Length = 3354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 2514 FSTSVY 2519>NP_001245391 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 305 FSTSVY 310>NP_001245392 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 305 FSTSVY 310>NP_001595 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 305 FSTSVY 310>NP_817123 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFSTSVYT 9 +FS SVYT Sbjct: 156 VFSQSVYT 163>XP_006721136 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLF+ +YT Sbjct: 391 TLFTMDIYT 399>XP_006721135 Length = 698 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLF+ +YT Sbjct: 403 TLFTMDIYT 411>XP_005253015 Length = 286 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 155 FSTSVY 160>XP_006718309 Length = 355 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 224 FSTSVY 229>XP_006718308 Length = 369 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 238 FSTSVY 243>XP_006718307 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 246 FSTSVY 251>XP_005253014 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 305 FSTSVY 310>XP_005253013 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 291 FSTSVY 296>XP_005253012 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 291 FSTSVY 296>XP_005253011 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 305 FSTSVY 310>XP_006718005 Length = 3397 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 2557 FSTSVY 2562>XP_006718004 Length = 3399 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 2559 FSTSVY 2564>XP_006718003 Length = 3419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 2579 FSTSVY 2584>XP_005275746 Length = 3352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 2512 FSTSVY 2517>XP_003403671 Length = 3354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 2514 FSTSVY 2519>XP_006710003 Length = 3374 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSTSVY 8 FSTSVY Sbjct: 2534 FSTSVY 2539>NP_001127925 Length = 1059 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFSTSVYT 9 +FS SVYT Sbjct: 156 VFSQSVYT 163>NP_004516 Length = 4655 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLFSTSVY 8 TLF SVY Sbjct: 1649 TLFEDSVY 1656>NP_001277251 Length = 2854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLFS VY+ Sbjct: 771 TLFSEMVYS 779>NP_005500 Length = 3027 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLFS VY+ Sbjct: 944 TLFSEMVYS 952>NP_001277250 Length = 3048 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLFS VY+ Sbjct: 944 TLFSEMVYS 952>XP_006714623 Length = 1625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLFS VY+ Sbjct: 944 TLFSEMVYS 952>XP_005271970 Length = 2931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLFS VY+ Sbjct: 944 TLFSEMVYS 952>XP_005271969 Length = 3020 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLFS VY+ Sbjct: 878 TLFSEMVYS 886>XP_005271967 Length = 3065 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLFS VY+ Sbjct: 944 TLFSEMVYS 952>XP_005271966 Length = 3086 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLFS VY+ Sbjct: 944 TLFSEMVYS 952>XP_006712591 Length = 3308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLFSTSVY 8 TLF SVY Sbjct: 1654 TLFEDSVY 1661>XP_006712590 Length = 3897 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLFSTSVY 8 TLF SVY Sbjct: 891 TLFEDSVY 898>XP_006712589 Length = 4660 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TLFSTSVY 8 TLF SVY Sbjct: 1654 TLFEDSVY 1661>NP_694996 Length = 2526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TLFSTSVY 8 T+FS VY Sbjct: 757 TIFSVGVY 764>NP_001177793 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FSTSVYT 9 FST+VY+ Sbjct: 22 FSTAVYS 28>NP_055042 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLF+ +YT Sbjct: 403 TLFTIDLYT 411>NP_001265227 Length = 2614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TLFSTSVY 8 T+FS VY Sbjct: 757 TIFSVGVY 764>NP_775922 Length = 6996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFSTSVYT 9 +FS+ VYT Sbjct: 570 IFSSPVYT 577>NP_068593 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FSTSVYT 9 FST+VY+ Sbjct: 22 FSTAVYS 28>XP_006726589 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLFSTS 6 TLFSTS Sbjct: 538 TLFSTS 543>XP_006724371 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLFSTSVYT 9 TLF+ +YT Sbjct: 357 TLFTIDLYT 365>XP_006718462 Length = 4966 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLFSTS 6 TLFSTS Sbjct: 4573 TLFSTS 4578>XP_006710010 Length = 1103 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLFSTS 6 TLFSTS Sbjct: 710 TLFSTS 715Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.121 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 365,735 Number of extensions: 711 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |