Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001128643 17 4312 NP_001128642 17 4312 NP_689548 17 4312 NP_114117 17 4312 NP_056326 17 4312 NP_001258803 17 4312 XP_006723833 17 4312 XP_005260442 17 4312 NP_116023 16 5631 NP_443179 16 5631 XP_005266703 16 5631 XP_005251676 16 5631 NP_000766 16 7355 NP_056078 16 7355 NP_001167587 16 7355 NP_001167588 16 7355 XP_005254315 16 7355 XP_005254314 16 7355 XP_006720509 16 7355 XP_005254313 16 7355 XP_005254312 16 7355 NP_002144 16 7355 NP_001269607 15 9605 NP_000457 15 9605 NP_064592 15 9605 NP_001599 15 9605 NP_001273433 15 9605 NP_001273432 15 9605 NP_006635 15 9605 NP_001273434 15 9605 NP_004614 15 9605 NP_000536 15 9605 NP_001239049 15 9605 NP_055963 15 9605 NP_001239053 15 9605 NP_001239051 15 9605 NP_001239048 15 9605 XP_005257359 15 9605 XP_006719820 15 9605 XP_005266293 15 9605 XP_005252384 15 9605 XP_005250490 15 9605 XP_005250486 15 9605 XP_005246574 15 9605 XP_005247048 15 9605 XP_005247047 15 9605 XP_006711950 15 9605 XP_005264750 15 9605 NP_005524 15 9605 NP_057114 15 9605>NP_001128643 Length = 289 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LEVFFSD 8 LE+FF+D Sbjct: 247 LEIFFTD 253>NP_001128642 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LEVFFSD 8 LE+FF+D Sbjct: 254 LEIFFTD 260>NP_689548 Length = 531 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEVFFSDT 9 L VFFS+T Sbjct: 146 LSVFFSET 153>NP_114117 Length = 289 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LEVFFSD 8 LE+FF+D Sbjct: 247 LEIFFTD 253>NP_056326 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLEVFFS 7 TL+VFFS Sbjct: 327 TLQVFFS 333>NP_001258803 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLEVFFS 7 TL+VFFS Sbjct: 327 TLQVFFS 333>XP_006723833 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLEVFFS 7 TL+VFFS Sbjct: 327 TLQVFFS 333>XP_005260442 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TLEVFFS 7 TL+VFFS Sbjct: 327 TLQVFFS 333>NP_116023 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEVFFSDT 9 L VFFSD+ Sbjct: 557 LAVFFSDS 564>NP_443179 Length = 2170 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLEVFF 6 TLEVFF Sbjct: 859 TLEVFF 864>XP_005266703 Length = 1501 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLEVFF 6 TLEVFF Sbjct: 190 TLEVFF 195>XP_005251676 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEVFFSDT 9 L VFFSD+ Sbjct: 557 LAVFFSDS 564>NP_000766 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLEVFFSDT 9 TL++FF+ T Sbjct: 305 TLDLFFAGT 313>NP_056078 Length = 3036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EVFFSDT 9 + FFSDT Sbjct: 2488 DAFFSDT 2494>NP_001167587 Length = 3037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EVFFSDT 9 + FFSDT Sbjct: 2489 DAFFSDT 2495>NP_001167588 Length = 2400 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EVFFSDT 9 + FFSDT Sbjct: 1852 DAFFSDT 1858>XP_005254315 Length = 2576 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EVFFSDT 9 + FFSDT Sbjct: 2489 DAFFSDT 2495>XP_005254314 Length = 2605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EVFFSDT 9 + FFSDT Sbjct: 2489 DAFFSDT 2495>XP_006720509 Length = 2646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EVFFSDT 9 + FFSDT Sbjct: 2489 DAFFSDT 2495>XP_005254313 Length = 3057 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EVFFSDT 9 + FFSDT Sbjct: 2488 DAFFSDT 2494>XP_005254312 Length = 3058 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EVFFSDT 9 + FFSDT Sbjct: 2489 DAFFSDT 2495>NP_002144 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LEVFFSDT 9 + FFSDT Sbjct: 1 MSTFFSDT 8>NP_001269607 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLEVFFSD 8 TLEV FS+ Sbjct: 435 TLEVAFSE 442>NP_000457 Length = 1283 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLEVFFSD 8 TLEV FS+ Sbjct: 643 TLEVAFSE 650>NP_064592 Length = 1561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVFFSD 8 EVFF+D Sbjct: 1359 EVFFND 1364>NP_001599 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TLEVFFSD 8 T E+FF D Sbjct: 258 TAELFFED 265>NP_001273433 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEVFFSD 8 LE F+SD Sbjct: 444 LEAFYSD 450>NP_001273432 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEVFFSD 8 LE F+SD Sbjct: 442 LEAFYSD 448>NP_006635 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEVFFSD 8 LE F+SD Sbjct: 442 LEAFYSD 448>NP_001273434 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEVFFSD 8 LE F+SD Sbjct: 366 LEAFYSD 372>NP_004614 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEVFFSD 8 LEV+F D Sbjct: 325 LEVYFED 331>NP_000536 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLEVFFSDT 9 T +VF SDT Sbjct: 539 TKQVFTSDT 547>NP_001239049 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVFFSD 8 E+FFSD Sbjct: 745 ELFFSD 750>NP_055963 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVFFSD 8 E+FFSD Sbjct: 745 ELFFSD 750>NP_001239053 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVFFSD 8 E+FFSD Sbjct: 745 ELFFSD 750>NP_001239051 Length = 1288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVFFSD 8 E+FFSD Sbjct: 710 ELFFSD 715>NP_001239048 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVFFSD 8 E+FFSD Sbjct: 745 ELFFSD 750>XP_005257359 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LEVFFSDT 9 LE+FF T Sbjct: 155 LEIFFGKT 162>XP_006719820 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEVFFSD 8 LE F+SD Sbjct: 497 LEAFYSD 503>XP_005266293 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEVFFSD 8 LE F+SD Sbjct: 444 LEAFYSD 450>XP_005252384 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVFFSD 8 EVFF+D Sbjct: 639 EVFFND 644>XP_005250490 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLEVFFSD 8 TLEV FS+ Sbjct: 60 TLEVAFSE 67>XP_005250486 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLEVFFSD 8 TLEV FS+ Sbjct: 603 TLEVAFSE 610>XP_005246574 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TLEVFFSD 8 T E+FF D Sbjct: 237 TAELFFED 244>XP_005247048 Length = 1107 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVFFSD 8 E+FFSD Sbjct: 529 ELFFSD 534>XP_005247047 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVFFSD 8 E+FFSD Sbjct: 559 ELFFSD 564>XP_006711950 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TLEVFFSDT 9 +L FF DT Sbjct: 205 SLSTFFGDT 213>XP_005264750 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TLEVFFSDT 9 +L FF DT Sbjct: 205 SLSTFFGDT 213>NP_005524 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LEVFFSDT 9 LE+FF T Sbjct: 157 LEIFFGKT 164>NP_057114 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TLEVFFSDT 9 +L FF DT Sbjct: 205 SLSTFFGDT 213Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.138 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 463,685 Number of extensions: 975 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |